| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mgtA [H]
Identifier: 87200557
GI number: 87200557
Start: 2748173
End: 2749378
Strand: Direct
Name: mgtA [H]
Synonym: Saro_2544
Alternate gene names: 87200557
Gene position: 2748173-2749378 (Clockwise)
Preceding gene: 87200555
Following gene: 87200560
Centisome position: 77.16
GC content: 69.07
Gene sequence:
>1206_bases ATGAGTTCCGCGAAGACCGCCCCCGCCGTCCCATCGTTCCCGACCGAGGTCGCAGGCCTGCGGGTTGCGCTGTTCAGCGG CAACTACAACTACGTGCGCGACGGGGCGAACCAGGCGCTCAACCGGCTGGTCGGCTACCTCCTGCGCCAGGGCGCGGACG TCCGGGTCTATGCGCCCAAGGTGGAAGAGCCCGCCTTCCCCGCCACCGGGACGCTTGTCGGCGTTCCCTCGTTCGCGATC CCCGGCCGGGCCGAATATCGCTTCCCCCTCGCGCTCAGCCCGCGTGTGCGCCGCGATCTGGCAGCGTTCGATCCCCACGT CGTCCACGTATCCTCGCCAGACGTGGTGGCACACCGGGCGGTGTCCTGGGCGCGTCGGCGCGGCCTGCCGATCCTGGCCT CGGTCCACACCCGGTTCGAAACCTACTTCCGCTACTACAACATGGCCTGGCTCGAACCGGTGATCGAGGCGCTGATGCGC CGCTTCTACCGCCGCTGCGACGCACTGGTGGCCCCGTCGGAATCGATGGCGCAAGTGCTTCGCGACCAGCGCATGAACTA CGACATCGATATCTGGTCGCGCGGGGTAGACCGCGACATCTTCCATCCCGGCGCGCGCAGCCTCGAATGGCGACGCGAGC TGGGCATTGCCGATGACGAAGTCGTGGTCGGCTTCCTTGGCCGACTGGTGATGGAAAAGGGGCTCGACGTCTTCTCGGAC TCGATCGACCAGCTCGCGCGGCGCGGCGTCAGGCACCGGGTGCTGGTGGTGGGCGAAGGCCCCGCGCATGACTGGTTCGC CGCGCGCCTGCCGCAGGCGGTCTTCGCCGGGTTCCAGGGCGGAGCAGACCTTGGCCGCGCGGTTGCCAGCATGGACGTGC TGTTCAACCCTTCGGTCACCGAAACCTTCGGCAACGTCACGCTCGAGGCGATGGCCTGCCGCGTTCCGGTCGTTGCGGCG GCCGCCACCGGCAGCCAGAGCCTTGTCGACGACAACGTTTCCGGCCGCCTCATCGCGCCGGGCGCGGTGCGGCAGTTTGC CGAGGCGCTGCGCTGCTATGTCGAGGACGCGGACTTGCGCGGCCGGCACGGTGCGGCGGGCGAGGAACGCAGCCTCGACT TCTCGTGGGACCGCATAAACCAGGCGGTTGCCGACACCTACCTGCGGCTCGTCCGGCAGAAGGCGATCCGCAGCAGGCGC CGCTAG
Upstream 100 bases:
>100_bases CGCGACCGGACGTGCCGCGCGCGCCACGGACGGCGCATTTCGACAACGGCGTGACCGCGCTCTCTCGCCAAGGCAGCGAT AGCGGGCTATGGGGCCGCGG
Downstream 100 bases:
>100_bases CGCAGGACGCCCGCCTCGGCCATGCGCCGCGCGTAGGCAAGCTGGAACACCAGAGCGACAAGGATCGCCAGGGCAATGCC ATAGGCGCCCGGCCCCTTCA
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: Guanosine diphosphomannose-dependent alpha-mannosyltransferase [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSSAKTAPAVPSFPTEVAGLRVALFSGNYNYVRDGANQALNRLVGYLLRQGADVRVYAPKVEEPAFPATGTLVGVPSFAI PGRAEYRFPLALSPRVRRDLAAFDPHVVHVSSPDVVAHRAVSWARRRGLPILASVHTRFETYFRYYNMAWLEPVIEALMR RFYRRCDALVAPSESMAQVLRDQRMNYDIDIWSRGVDRDIFHPGARSLEWRRELGIADDEVVVGFLGRLVMEKGLDVFSD SIDQLARRGVRHRVLVVGEGPAHDWFAARLPQAVFAGFQGGADLGRAVASMDVLFNPSVTETFGNVTLEAMACRVPVVAA AATGSQSLVDDNVSGRLIAPGAVRQFAEALRCYVEDADLRGRHGAAGEERSLDFSWDRINQAVADTYLRLVRQKAIRSRR R
Sequences:
>Translated_401_residues MSSAKTAPAVPSFPTEVAGLRVALFSGNYNYVRDGANQALNRLVGYLLRQGADVRVYAPKVEEPAFPATGTLVGVPSFAI PGRAEYRFPLALSPRVRRDLAAFDPHVVHVSSPDVVAHRAVSWARRRGLPILASVHTRFETYFRYYNMAWLEPVIEALMR RFYRRCDALVAPSESMAQVLRDQRMNYDIDIWSRGVDRDIFHPGARSLEWRRELGIADDEVVVGFLGRLVMEKGLDVFSD SIDQLARRGVRHRVLVVGEGPAHDWFAARLPQAVFAGFQGGADLGRAVASMDVLFNPSVTETFGNVTLEAMACRVPVVAA AATGSQSLVDDNVSGRLIAPGAVRQFAEALRCYVEDADLRGRHGAAGEERSLDFSWDRINQAVADTYLRLVRQKAIRSRR R >Mature_400_residues SSAKTAPAVPSFPTEVAGLRVALFSGNYNYVRDGANQALNRLVGYLLRQGADVRVYAPKVEEPAFPATGTLVGVPSFAIP GRAEYRFPLALSPRVRRDLAAFDPHVVHVSSPDVVAHRAVSWARRRGLPILASVHTRFETYFRYYNMAWLEPVIEALMRR FYRRCDALVAPSESMAQVLRDQRMNYDIDIWSRGVDRDIFHPGARSLEWRRELGIADDEVVVGFLGRLVMEKGLDVFSDS IDQLARRGVRHRVLVVGEGPAHDWFAARLPQAVFAGFQGGADLGRAVASMDVLFNPSVTETFGNVTLEAMACRVPVVAAA ATGSQSLVDDNVSGRLIAPGAVRQFAEALRCYVEDADLRGRHGAAGEERSLDFSWDRINQAVADTYLRLVRQKAIRSRRR
Specific function: Catalyzes the addition of a mannose residue from GDP-D- mannose to GlcAGroAc2 to generate 1,2-di-O-C16/C18:1-(alpha-D- mannopyranosyl)-(1-4)-(alpha-D-glucopyranosyluronic acid)-(1-3)- glycerol(ManGlcAGroAc2) [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 44497; Mature: 44366
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAKTAPAVPSFPTEVAGLRVALFSGNYNYVRDGANQALNRLVGYLLRQGADVRVYAPK CCCCCCCCCCCCCCCHHCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEECCC VEEPAFPATGTLVGVPSFAIPGRAEYRFPLALSPRVRRDLAAFDPHVVHVSSPDVVAHRA CCCCCCCCCCCEEECCCCCCCCCCCEECCEECCHHHHHHHHHCCCEEEEECCCCHHHHHH VSWARRRGLPILASVHTRFETYFRYYNMAWLEPVIEALMRRFYRRCDALVAPSESMAQVL HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RDQRMNYDIDIWSRGVDRDIFHPGARSLEWRRELGIADDEVVVGFLGRLVMEKGLDVFSD HHHHCCCCEEHHCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH SIDQLARRGVRHRVLVVGEGPAHDWFAARLPQAVFAGFQGGADLGRAVASMDVLFNPSVT HHHHHHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHH ETFGNVTLEAMACRVPVVAAAATGSQSLVDDNVSGRLIAPGAVRQFAEALRCYVEDADLR HHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCC GRHGAAGEERSLDFSWDRINQAVADTYLRLVRQKAIRSRRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSAKTAPAVPSFPTEVAGLRVALFSGNYNYVRDGANQALNRLVGYLLRQGADVRVYAPK CCCCCCCCCCCCCCHHCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHCCCCEEEECCC VEEPAFPATGTLVGVPSFAIPGRAEYRFPLALSPRVRRDLAAFDPHVVHVSSPDVVAHRA CCCCCCCCCCCEEECCCCCCCCCCCEECCEECCHHHHHHHHHCCCEEEEECCCCHHHHHH VSWARRRGLPILASVHTRFETYFRYYNMAWLEPVIEALMRRFYRRCDALVAPSESMAQVL HHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH RDQRMNYDIDIWSRGVDRDIFHPGARSLEWRRELGIADDEVVVGFLGRLVMEKGLDVFSD HHHHCCCCEEHHCCCCCCHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH SIDQLARRGVRHRVLVVGEGPAHDWFAARLPQAVFAGFQGGADLGRAVASMDVLFNPSVT HHHHHHHCCCCEEEEEEECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHCCCCHH ETFGNVTLEAMACRVPVVAAAATGSQSLVDDNVSGRLIAPGAVRQFAEALRCYVEDADLR HHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCEECCHHHHHHHHHHHHHHHCCCCC GRHGAAGEERSLDFSWDRINQAVADTYLRLVRQKAIRSRRR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12948626 [H]