| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200545
Identifier: 87200545
GI number: 87200545
Start: 2734123
End: 2734542
Strand: Direct
Name: 87200545
Synonym: Saro_2532
Alternate gene names: NA
Gene position: 2734123-2734542 (Clockwise)
Preceding gene: 87200544
Following gene: 87200547
Centisome position: 76.77
GC content: 67.62
Gene sequence:
>420_bases ATGACCGGATTGACCTCCGCGCTGGCGGGGTTGCGCCTTGCGCTGCTTGGCGGGCTGACGCTGCTGCTGGGCGCGTTCCA TGGCTTCGTCGGGTGGCACAAGCTCTTCTCGTCGCGCGAGGAACTGATGCTCCACAAGGCATGGACCGTGCACATTCCCG ACGTGGTGGGACGCGCGGTCGGCATGGCGGAGATTGTCCTGACCGCGGCATTGCTCGTCGCGCTCGTGCGGCCTTCCCTT GCCCGCCTCGGCCTGTGGTCCTGCGGCGCATTTATCGCGCTCGAGATCGTCTCGACGATCACCCACCAGGTATCGCGCGA CGGCGCCCCGCTTGCGCAGAACCTGCTGTCGATTGCGCTGACGGGCGCGCTTGCGTGGCTCTTCGCGACGCGGGACCGGC GTCAGATCCGCTCTGCCTGA
Upstream 100 bases:
>100_bases GGCGCAGATCCGCGGCGACGAAGGCCGATTGATGGCAATTGCAGCCGGATAAAATCCGTATTAGTCTTCTTGTTCTAAAA TAACGAACAGGGAGACGACG
Downstream 100 bases:
>100_bases GCCACCGCGTCGCTGGCGCGCAAGGCGCTGATGATCCGGGTGAGGTGCGCCAGGTCGCGCACCTCGAGGTCCACCTCGTA GGTGTGGAACGGGTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 139; Mature: 138
Protein sequence:
>139_residues MTGLTSALAGLRLALLGGLTLLLGAFHGFVGWHKLFSSREELMLHKAWTVHIPDVVGRAVGMAEIVLTAALLVALVRPSL ARLGLWSCGAFIALEIVSTITHQVSRDGAPLAQNLLSIALTGALAWLFATRDRRQIRSA
Sequences:
>Translated_139_residues MTGLTSALAGLRLALLGGLTLLLGAFHGFVGWHKLFSSREELMLHKAWTVHIPDVVGRAVGMAEIVLTAALLVALVRPSL ARLGLWSCGAFIALEIVSTITHQVSRDGAPLAQNLLSIALTGALAWLFATRDRRQIRSA >Mature_138_residues TGLTSALAGLRLALLGGLTLLLGAFHGFVGWHKLFSSREELMLHKAWTVHIPDVVGRAVGMAEIVLTAALLVALVRPSLA RLGLWSCGAFIALEIVSTITHQVSRDGAPLAQNLLSIALTGALAWLFATRDRRQIRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14847; Mature: 14716
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLTSALAGLRLALLGGLTLLLGAFHGFVGWHKLFSSREELMLHKAWTVHIPDVVGRAV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHH GMAEIVLTAALLVALVRPSLARLGLWSCGAFIALEIVSTITHQVSRDGAPLAQNLLSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TGALAWLFATRDRRQIRSA HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGLTSALAGLRLALLGGLTLLLGAFHGFVGWHKLFSSREELMLHKAWTVHIPDVVGRAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHH GMAEIVLTAALLVALVRPSLARLGLWSCGAFIALEIVSTITHQVSRDGAPLAQNLLSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH TGALAWLFATRDRRQIRSA HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA