| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200515
Identifier: 87200515
GI number: 87200515
Start: 2703561
End: 2705093
Strand: Reverse
Name: 87200515
Synonym: Saro_2502
Alternate gene names: NA
Gene position: 2705093-2703561 (Counterclockwise)
Preceding gene: 87200516
Following gene: 87200514
Centisome position: 75.95
GC content: 66.99
Gene sequence:
>1533_bases ATGCAGGTATCTGAAACGACGCCGATTATCGTCGGCGTCGGCCAGTTCGTCGAGCGGATCGACGCCCCCGACTATGCGGG CCTTTCGTTTGCCGATCTATCGGCGCGCGCGGGGGCCGCGGCGCTTGCCGATGCGCGTGCGGCGCTGCCGCTGGCGCCGA TGGTGAAGGCGGTCGGGGCGATCAGGACGTTCGAGGAATCGGGCGCGATGCAGGTGCCTTTCGGGCGCGCGGACAAGATG CCGCTGGCAGTCGCGCGCCGGCTCGGCATCGAGCCAGAGGTGGCGATCCTGGAGAAGGTCGGCGGGCAATCGCCGCTGGC TCTGCTTGCGGATATGGGCGCTCGCATCGCATCGGGCGAGGTTACGGCGGCGCTCATGTTCGGCAGCGAGGCGATCTCTA CCGTGCGTCACCTGACGACCCGGGGCGAGAGCCGCGACTGGGCCGAACATGACGATGGCGAGATGATCGACAAAGGCATG GGGTTCGAGGGTACGCTTTCGCCAGTGAGCATCGCCCACGGCATCCGGGCGCCAGTCGTTGCCTATGCGCTGTGCGAGAA TGCCCGCCGGGCAAGGCTGGGCCTGTCGCGCGAGGCCTATGCAGCCGAGATGGGACGGCTTTTCTCGCCATTCACCGAGG TGGCCGCGCGCAATCCCTACAGCGCGGCTGCGGTAAAGCCCATGAGCGCCGGGGAAATCGCCACCCCCGGCGAGCGCAAT CGCATGATTGCCGATCCCTATCCGCTCAAGCTCGTGTCGCGCGACCAGGTCAACCAGGCGGCGGCCGTTCTGCTGATGTC GGTGAAGGCCGCCCGGGAGGCGGGGGTGCCCGAGGAAAGGTGGGTGTTCCTCCACGGCGCCGCGCTTGCCAACGAACGCG AGATCCTCGACCGTCCGGACATCGGTGCCTATCCGGCAGCCCGCGCCGCCATCGCCTCCGCCTTTGCCCGTGCCGGCAGG AGCGTGGCCGACATCGCGGCGTTCGATTTCTATTCCTGCTTTCCGATCCCGGTATTCAACGCGGCCATCGACGGACTTGG CCTTTCCCCGGACGATCCGCGCGGGCTTACGGTCACGGGCGGGCTTCCTTACTTCGGCGGGGCGGGCAACAACTATTCGA TGCACGCTTTCGCCAGCATGGCCGAACGCCTGCGCGCGAAGCCGGGCGACTTTGGCTTCGTCGGCCTCAATGGCGGGTTC CAGTCGAAATACGGCGCCGCGATCTTCTCGACCGAGCCGTGCGAATGGCCGGGGTGCGAGACGGGATCGATCCAGCAGAA GCTCGATGCGGCGGCCAAGCCCTCCATGGCACCTGCACCGGAAGGGCGCGGGCGGATCGGGACATATACCGTCACTTACG CCAAGGGCGTGCCGGAGCAGGCGATCGTGATCGGCGAGATGCTGTCCGGCGGACGCTTCATTGCAGCGAGCCGCGAGCCG GAAACGGTCACCGCCATGACGGAGGTCGATCCTCTCGGACGCGAGGTTTCCGTCACGCCATCCGAAAAGCGCAACAGCTT CACTTTCGCCTGA
Upstream 100 bases:
>100_bases CGTGGAAGGCGGGCTGGAAGGCCTGCTCGAATATACAAGCGCGCAGACGCTGGTGCGTCGCAAGAAGGCCGCGTTCGTCA ACTGACTGGTGAGGATGGGC
Downstream 100 bases:
>100_bases GGATCAAGCATGAGCGACAAGCCCGTAATGCTCGAGGGCATCCGCGTGGTGGACCTGACCACGGTCGTTTTCGGCCCCTA TGCGACGCAGATCCTGGCGG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: Acetyl-Co A Synthetase; Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase; Thiolase; Enoyl-CoA Hydratase/Isomerase Family Protein
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MQVSETTPIIVGVGQFVERIDAPDYAGLSFADLSARAGAAALADARAALPLAPMVKAVGAIRTFEESGAMQVPFGRADKM PLAVARRLGIEPEVAILEKVGGQSPLALLADMGARIASGEVTAALMFGSEAISTVRHLTTRGESRDWAEHDDGEMIDKGM GFEGTLSPVSIAHGIRAPVVAYALCENARRARLGLSREAYAAEMGRLFSPFTEVAARNPYSAAAVKPMSAGEIATPGERN RMIADPYPLKLVSRDQVNQAAAVLLMSVKAAREAGVPEERWVFLHGAALANEREILDRPDIGAYPAARAAIASAFARAGR SVADIAAFDFYSCFPIPVFNAAIDGLGLSPDDPRGLTVTGGLPYFGGAGNNYSMHAFASMAERLRAKPGDFGFVGLNGGF QSKYGAAIFSTEPCEWPGCETGSIQQKLDAAAKPSMAPAPEGRGRIGTYTVTYAKGVPEQAIVIGEMLSGGRFIAASREP ETVTAMTEVDPLGREVSVTPSEKRNSFTFA
Sequences:
>Translated_510_residues MQVSETTPIIVGVGQFVERIDAPDYAGLSFADLSARAGAAALADARAALPLAPMVKAVGAIRTFEESGAMQVPFGRADKM PLAVARRLGIEPEVAILEKVGGQSPLALLADMGARIASGEVTAALMFGSEAISTVRHLTTRGESRDWAEHDDGEMIDKGM GFEGTLSPVSIAHGIRAPVVAYALCENARRARLGLSREAYAAEMGRLFSPFTEVAARNPYSAAAVKPMSAGEIATPGERN RMIADPYPLKLVSRDQVNQAAAVLLMSVKAAREAGVPEERWVFLHGAALANEREILDRPDIGAYPAARAAIASAFARAGR SVADIAAFDFYSCFPIPVFNAAIDGLGLSPDDPRGLTVTGGLPYFGGAGNNYSMHAFASMAERLRAKPGDFGFVGLNGGF QSKYGAAIFSTEPCEWPGCETGSIQQKLDAAAKPSMAPAPEGRGRIGTYTVTYAKGVPEQAIVIGEMLSGGRFIAASREP ETVTAMTEVDPLGREVSVTPSEKRNSFTFA >Mature_510_residues MQVSETTPIIVGVGQFVERIDAPDYAGLSFADLSARAGAAALADARAALPLAPMVKAVGAIRTFEESGAMQVPFGRADKM PLAVARRLGIEPEVAILEKVGGQSPLALLADMGARIASGEVTAALMFGSEAISTVRHLTTRGESRDWAEHDDGEMIDKGM GFEGTLSPVSIAHGIRAPVVAYALCENARRARLGLSREAYAAEMGRLFSPFTEVAARNPYSAAAVKPMSAGEIATPGERN RMIADPYPLKLVSRDQVNQAAAVLLMSVKAAREAGVPEERWVFLHGAALANEREILDRPDIGAYPAARAAIASAFARAGR SVADIAAFDFYSCFPIPVFNAAIDGLGLSPDDPRGLTVTGGLPYFGGAGNNYSMHAFASMAERLRAKPGDFGFVGLNGGF QSKYGAAIFSTEPCEWPGCETGSIQQKLDAAAKPSMAPAPEGRGRIGTYTVTYAKGVPEQAIVIGEMLSGGRFIAASREP ETVTAMTEVDPLGREVSVTPSEKRNSFTFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53679; Mature: 53679
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVSETTPIIVGVGQFVERIDAPDYAGLSFADLSARAGAAALADARAALPLAPMVKAVGA CCCCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH IRTFEESGAMQVPFGRADKMPLAVARRLGIEPEVAILEKVGGQSPLALLADMGARIASGE HHHHHHCCCEECCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCC VTAALMFGSEAISTVRHLTTRGESRDWAEHDDGEMIDKGMGFEGTLSPVSIAHGIRAPVV EEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCCHHHHH AYALCENARRARLGLSREAYAAEMGRLFSPFTEVAARNPYSAAAVKPMSAGEIATPGERN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC RMIADPYPLKLVSRDQVNQAAAVLLMSVKAAREAGVPEERWVFLHGAALANEREILDRPD CEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHCCCHHHCCCCC IGAYPAARAAIASAFARAGRSVADIAAFDFYSCFPIPVFNAAIDGLGLSPDDPRGLTVTG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEC GLPYFGGAGNNYSMHAFASMAERLRAKPGDFGFVGLNGGFQSKYGAAIFSTEPCEWPGCE CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCC TGSIQQKLDAAAKPSMAPAPEGRGRIGTYTVTYAKGVPEQAIVIGEMLSGGRFIAASREP CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCC ETVTAMTEVDPLGREVSVTPSEKRNSFTFA CEEEEEHHCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure MQVSETTPIIVGVGQFVERIDAPDYAGLSFADLSARAGAAALADARAALPLAPMVKAVGA CCCCCCCCEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHH IRTFEESGAMQVPFGRADKMPLAVARRLGIEPEVAILEKVGGQSPLALLADMGARIASGE HHHHHHCCCEECCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHCCCCCCCCC VTAALMFGSEAISTVRHLTTRGESRDWAEHDDGEMIDKGMGFEGTLSPVSIAHGIRAPVV EEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHCCHHHHH AYALCENARRARLGLSREAYAAEMGRLFSPFTEVAARNPYSAAAVKPMSAGEIATPGERN HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCC RMIADPYPLKLVSRDQVNQAAAVLLMSVKAAREAGVPEERWVFLHGAALANEREILDRPD CEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEEECCHHCCCHHHCCCCC IGAYPAARAAIASAFARAGRSVADIAAFDFYSCFPIPVFNAAIDGLGLSPDDPRGLTVTG CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCEEEEC GLPYFGGAGNNYSMHAFASMAERLRAKPGDFGFVGLNGGFQSKYGAAIFSTEPCEWPGCE CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCCCCC TGSIQQKLDAAAKPSMAPAPEGRGRIGTYTVTYAKGVPEQAIVIGEMLSGGRFIAASREP CCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHCCCEEEEECCCC ETVTAMTEVDPLGREVSVTPSEKRNSFTFA CEEEEEHHCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA