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The map label for this gene is rimP

Identifier: 87200506

GI number: 87200506

Start: 2694988

End: 2695548

Strand: Reverse

Name: rimP

Synonym: Saro_2493

Alternate gene names: 87200506

Gene position: 2695548-2694988 (Counterclockwise)

Preceding gene: 87200507

Following gene: 87200505

Centisome position: 75.68

GC content: 62.21

Gene sequence:

>561_bases
ATGACGGACATTGCGCGGATCATCGAGGTTGTCGAGCCGGAGGCCAAGGCCCTTGGCTTCGATCTCGTGCGCGTGCGCTA
CTTCAAGGGCGGCGAAATCGGCGACGAGGAGCATACGCTTCAGATCATGGCTGAACGTCCGGACACGGGCCAGCTCGTGA
TCGAGGACTGCGCAGCCCTCTCGCGCCGGGTTTCGGACCGCTTCGACGAACTGGAAGAGGCCGGCGACGTCCTCATCGAG
GACGCCTATCGTCTCGAGGTGTCCTCTCCCGGCATCGACCGTCCGCTGACCCGCGCGAAGGACTTCGCCGCCTGGATTGG
CCACGAGGCCCGCGTCGAACTTTCCGAACTGCTCGACAACCGCAAGCGTTTCCGGGGTGAACTCAAGGGGTTCGACGCCG
AAACGCAGGCCATTTCGATCGAGGACGACGGCGTCGTGTTCGAAGTGCCGTTCGATCTCGTGTCCAATGCCAAGCTTATC
CTCACCGACAAGCTTATCGCCGCCTCCCGACCGCTGGATACCAGCGGTGCGGACGAAATTCTCGAAGAACAGGAAGACTG
A

Upstream 100 bases:

>100_bases
TATCTGCGCCTCATCCCGACATTGTGAAAGCAAGGTCAGGCTGGCTCCAGACGGTGCCGGCTCGGACCCGCTTTTGCCCG
TTGTCGGCCACGGAGATTGC

Downstream 100 bases:

>100_bases
CCAATGGCCAGTGCAATTTCCGCGAACCGCGCCGAACTGCTTGCGATCGCCAACGCGGTCGCCACCGAGAAGATGATCGA
CAAGTCGATCGTCATCGAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAALSRRVSDRFDELEEAGDVLIE
DAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDNRKRFRGELKGFDAETQAISIEDDGVVFEVPFDLVSNAKLI
LTDKLIAASRPLDTSGADEILEEQED

Sequences:

>Translated_186_residues
MTDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAALSRRVSDRFDELEEAGDVLIE
DAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDNRKRFRGELKGFDAETQAISIEDDGVVFEVPFDLVSNAKLI
LTDKLIAASRPLDTSGADEILEEQED
>Mature_185_residues
TDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAALSRRVSDRFDELEEAGDVLIED
AYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDNRKRFRGELKGFDAETQAISIEDDGVVFEVPFDLVSNAKLIL
TDKLIAASRPLDTSGADEILEEQED

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=142, Percent_Identity=33.8028169014084, Blast_Score=78, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_NOVAD (Q2G5E4)

Other databases:

- EMBL:   CP000248
- RefSeq:   YP_497763.1
- ProteinModelPortal:   Q2G5E4
- SMR:   Q2G5E4
- STRING:   Q2G5E4
- GeneID:   3916813
- GenomeReviews:   CP000248_GR
- KEGG:   nar:Saro_2493
- NMPDR:   fig|48935.1.peg.4084
- eggNOG:   COG0779
- HOGENOM:   HBG668072
- OMA:   TVQIMAD
- PhylomeDB:   Q2G5E4
- ProtClustDB:   PRK14636
- BioCyc:   NARO279238:SARO_2493-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 20790; Mature: 20659

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAAL
CCHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
SRRVSDRFDELEEAGDVLIEDAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDN
HHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RKRFRGELKGFDAETQAISIEDDGVVFEVPFDLVSNAKLILTDKLIAASRPLDTSGADEI
HHHHHHHHCCCCCCCCEEEECCCCEEEEECHHHHCCCEEEEEHHHHHCCCCCCCCCHHHH
LEEQED
HHCCCC
>Mature Secondary Structure 
TDIARIIEVVEPEAKALGFDLVRVRYFKGGEIGDEEHTLQIMAERPDTGQLVIEDCAAL
CHHHHHHHHHCCHHHHHHHHEEEEEEECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHH
SRRVSDRFDELEEAGDVLIEDAYRLEVSSPGIDRPLTRAKDFAAWIGHEARVELSELLDN
HHHHHHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
RKRFRGELKGFDAETQAISIEDDGVVFEVPFDLVSNAKLILTDKLIAASRPLDTSGADEI
HHHHHHHHCCCCCCCCEEEECCCCEEEEECHHHHCCCEEEEEHHHHHCCCCCCCCCHHHH
LEEQED
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA