| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is atsA [H]
Identifier: 87200483
GI number: 87200483
Start: 2667360
End: 2669720
Strand: Direct
Name: atsA [H]
Synonym: Saro_2470
Alternate gene names: 87200483
Gene position: 2667360-2669720 (Clockwise)
Preceding gene: 87200482
Following gene: 87200484
Centisome position: 74.89
GC content: 63.41
Gene sequence:
>2361_bases ATGCGCGCAATCCGTTCCGCCCTTCGTTTGTCCGCCAGAAAACGCCGGCTCTGCGGAGGTTCCGCCATCGCCGCCTTACT TGCGCCAACCTTTGTCCTTGCAGAAACCGCCCCTGCCGATCCGCTGGCCGGCAAGGTCGGGCGCACCGTGCAGGTAACAC ATGCTCCGGCATGGCCTGCCCAACCGCAGGCCCCCAAGGGCGCGCCCAACGTACTGGTCATCCTTACCGACGACGTGGGC TTTGGCGTGACCAGCGCGTTTGGTGGGCCGGTGCCGACTGCCACTTTCGACGCGCTTGCCCAGACGGGCCTCCGCTACAA CCGTTTCAACACCACCGCGCTGTGCTCGCCCACGCGCGCCTCGCTCCTGACGGGCCGCCTGCCGCAAAATGTGGACATGG GCAACGTCACCAACCTGCCGACCGGGTTTGACGGCTACACCACCGTTATCCCGCAGTCCGCAGCCACCGTCGCCGAAGTG CTGAAGGAAAACGGCTTCAACACCGCGATGTTCGGCAAGAGCCACCTGACGCCCGAATGGCAGACGAGCGCGGCGGGCCC CTTCGACCAGTGGCCCACGGGCCTGGGGTTCGAATACTTCTACGGCTTCCTTTCGGCAGACACCTCGATGTGGCAGCCGA GCATTGTCGAGAACACCCTTCCGGTCGAGCCACCTCACGACGATCCAAACTACTTCTTCGAGAAGGACATGGCGGATCAC GCGATCAAGTGGATGCGCACGCAGCAAGCCGCCGCGCCGGACAAGCCGTTCTTCATGTACTACGCTCCCGGCATTGCCCA CACTCCGCACCATGCGCCCAAGGAGTGGCTGGAGAAGTTCCGGGGCAAGTTCGATCAGGGCTGGGACAAGCTGCGCGAGG AGACTTTCGCTCGGCAGAAGCGCATGGGCATCATCCCCGCGAACTCCCGGCTTTCGCCTCGCCCGGCTACGTTGCCCGCC TGGGATTCATTGAATGCCGACCAGAAGAAGCTCTATTCGCGCCTGATGGAGGCCTACGCAGCGAGCGTCTCGTATTCGGA TCATCAGACTGGTCGCCTGATCGAAGCGATCCGCGAGACCGGCGAACTGGACAACACGCTGATCATCTACATCCAGGGCG ACAATGGCAGCAGCGCAGAGGGCGGGCCGGAAGGACTGCTCTACGAACAGTCAACGATCACCGGCCGCAAGGAAACCATG GCCGAGAAGCTGTCGCACATTGACGATATCGGCGGGCCGAAGCTGTACAACCATTTCCCCGCAGCATGGGCCTGGGCAAC CAACTCGCCCTTCCCCTGGTGGAAGCAGGTCGCTTCGCAGGCAGGCGGCGTGCGCAACGGCATGGTCGTTTCCTGGCCCA AGCGCATCACCGAGAGGGGCGTGATCCGCTCGCAATATGCGCACGTCAGCGACATTGCGCCGACCGTGCTCGATGCGGTC GGGATCAAGTCTCCCGACTTGATCAAGGGCATCAGGCAGAAGCCGGTCGACGGAATCAGCCTAGCCTACACCTTCCAGCA GGGTTCTGCCCCGTCGGCCAGGCGCATGCAGATCTACGAGATGATGGAGAACTTCGGCATCTACAAGGACGGCTGGATGG CCGGCACGCTTCCCAAGCGCGCCGCCTGGGAAGCCGGCGCGGCGGGCGACCGCAAGCTCAGCGTCGGGCCCGACGAGCGC GAATGGTCTCTGTTCAACCTCGATGCCGACTTCACCACGGCCAAGGATCTCGCGAAGCAGAACCCCGCCAAGCTCAAGGA AATGCAAGATCTGTTCTGGGCGGAAGCCGCAAGAAACAACATTCTGCCGATCCACGACTATAGCCAGGGAACCGAAGGAC GGCCTTCGCTTGGCGCCTATCGCTCCAGCTTCACCTACCGCCCGGGTACAGCCACGATCGCGGAGGACGCAGCGCCGCAT ACCATTGGCAAAAGTTTCCGCATCGACGCTGACGTGACTGCAGGCAGCAGCACGAACGGCGTGATGATCGCGCAGGGTGG TCGCTTCGGCGGCTACAGCTTCTACCTCAAGGACGGGCGTCCGACCTTCCATTACAACGCCGTAGGCGCGGACGCCTTCA CCGTCGCCGCAGGGAGTGCCCTTGCCGAGGGCAAGCACACGCTTTCCGCAGAGTTCACCGCCGACAAGACCGTGCCGGGA ACGCCTGGAACGCTGACGCTATATGTCGACGGCAAGGCGGTAGGTTCCAGCAGGCTGGGCCGCACGGTGGCCGGGTGGAT GTCGCACACCGAAGGCCTCGACGTCGGCCTGGACCGGATAAGCGCGGTCAGTCCCGACTACAGCGTGCAGGATAGTGCCT TTACCGGCGAGATCGACGAAGTGCGGGTGTCGATCAAATGA
Upstream 100 bases:
>100_bases CTTCAAGTACTGAGATCCTCCCTTGCCCGGTCGCGCCCTCTTCTTCGGACGGCGGTGCGACCGGGGCTTTTTCAAGATTT CCGACAAGAGGTTCACCGCG
Downstream 100 bases:
>100_bases ACCCGAAGCGTGCAAAACGGAGGCGCAGCGCGGTAGCACCACTTGCCTTGTTGCTCGCGATGTCGCTTCCGGTCGTCTCT TCAGGAGCGGAAATTGCCCG
Product: sulfatase
Products: NA
Alternate protein names: AS; Aryl-sulfate sulphohydrolase [H]
Number of amino acids: Translated: 786; Mature: 786
Protein sequence:
>786_residues MRAIRSALRLSARKRRLCGGSAIAALLAPTFVLAETAPADPLAGKVGRTVQVTHAPAWPAQPQAPKGAPNVLVILTDDVG FGVTSAFGGPVPTATFDALAQTGLRYNRFNTTALCSPTRASLLTGRLPQNVDMGNVTNLPTGFDGYTTVIPQSAATVAEV LKENGFNTAMFGKSHLTPEWQTSAAGPFDQWPTGLGFEYFYGFLSADTSMWQPSIVENTLPVEPPHDDPNYFFEKDMADH AIKWMRTQQAAAPDKPFFMYYAPGIAHTPHHAPKEWLEKFRGKFDQGWDKLREETFARQKRMGIIPANSRLSPRPATLPA WDSLNADQKKLYSRLMEAYAASVSYSDHQTGRLIEAIRETGELDNTLIIYIQGDNGSSAEGGPEGLLYEQSTITGRKETM AEKLSHIDDIGGPKLYNHFPAAWAWATNSPFPWWKQVASQAGGVRNGMVVSWPKRITERGVIRSQYAHVSDIAPTVLDAV GIKSPDLIKGIRQKPVDGISLAYTFQQGSAPSARRMQIYEMMENFGIYKDGWMAGTLPKRAAWEAGAAGDRKLSVGPDER EWSLFNLDADFTTAKDLAKQNPAKLKEMQDLFWAEAARNNILPIHDYSQGTEGRPSLGAYRSSFTYRPGTATIAEDAAPH TIGKSFRIDADVTAGSSTNGVMIAQGGRFGGYSFYLKDGRPTFHYNAVGADAFTVAAGSALAEGKHTLSAEFTADKTVPG TPGTLTLYVDGKAVGSSRLGRTVAGWMSHTEGLDVGLDRISAVSPDYSVQDSAFTGEIDEVRVSIK
Sequences:
>Translated_786_residues MRAIRSALRLSARKRRLCGGSAIAALLAPTFVLAETAPADPLAGKVGRTVQVTHAPAWPAQPQAPKGAPNVLVILTDDVG FGVTSAFGGPVPTATFDALAQTGLRYNRFNTTALCSPTRASLLTGRLPQNVDMGNVTNLPTGFDGYTTVIPQSAATVAEV LKENGFNTAMFGKSHLTPEWQTSAAGPFDQWPTGLGFEYFYGFLSADTSMWQPSIVENTLPVEPPHDDPNYFFEKDMADH AIKWMRTQQAAAPDKPFFMYYAPGIAHTPHHAPKEWLEKFRGKFDQGWDKLREETFARQKRMGIIPANSRLSPRPATLPA WDSLNADQKKLYSRLMEAYAASVSYSDHQTGRLIEAIRETGELDNTLIIYIQGDNGSSAEGGPEGLLYEQSTITGRKETM AEKLSHIDDIGGPKLYNHFPAAWAWATNSPFPWWKQVASQAGGVRNGMVVSWPKRITERGVIRSQYAHVSDIAPTVLDAV GIKSPDLIKGIRQKPVDGISLAYTFQQGSAPSARRMQIYEMMENFGIYKDGWMAGTLPKRAAWEAGAAGDRKLSVGPDER EWSLFNLDADFTTAKDLAKQNPAKLKEMQDLFWAEAARNNILPIHDYSQGTEGRPSLGAYRSSFTYRPGTATIAEDAAPH TIGKSFRIDADVTAGSSTNGVMIAQGGRFGGYSFYLKDGRPTFHYNAVGADAFTVAAGSALAEGKHTLSAEFTADKTVPG TPGTLTLYVDGKAVGSSRLGRTVAGWMSHTEGLDVGLDRISAVSPDYSVQDSAFTGEIDEVRVSIK >Mature_786_residues MRAIRSALRLSARKRRLCGGSAIAALLAPTFVLAETAPADPLAGKVGRTVQVTHAPAWPAQPQAPKGAPNVLVILTDDVG FGVTSAFGGPVPTATFDALAQTGLRYNRFNTTALCSPTRASLLTGRLPQNVDMGNVTNLPTGFDGYTTVIPQSAATVAEV LKENGFNTAMFGKSHLTPEWQTSAAGPFDQWPTGLGFEYFYGFLSADTSMWQPSIVENTLPVEPPHDDPNYFFEKDMADH AIKWMRTQQAAAPDKPFFMYYAPGIAHTPHHAPKEWLEKFRGKFDQGWDKLREETFARQKRMGIIPANSRLSPRPATLPA WDSLNADQKKLYSRLMEAYAASVSYSDHQTGRLIEAIRETGELDNTLIIYIQGDNGSSAEGGPEGLLYEQSTITGRKETM AEKLSHIDDIGGPKLYNHFPAAWAWATNSPFPWWKQVASQAGGVRNGMVVSWPKRITERGVIRSQYAHVSDIAPTVLDAV GIKSPDLIKGIRQKPVDGISLAYTFQQGSAPSARRMQIYEMMENFGIYKDGWMAGTLPKRAAWEAGAAGDRKLSVGPDER EWSLFNLDADFTTAKDLAKQNPAKLKEMQDLFWAEAARNNILPIHDYSQGTEGRPSLGAYRSSFTYRPGTATIAEDAAPH TIGKSFRIDADVTAGSSTNGVMIAQGGRFGGYSFYLKDGRPTFHYNAVGADAFTVAAGSALAEGKHTLSAEFTADKTVPG TPGTLTLYVDGKAVGSSRLGRTVAGWMSHTEGLDVGLDRISAVSPDYSVQDSAFTGEIDEVRVSIK
Specific function: Plays an important role in the mineralization of sulfates [H]
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfatase family [H]
Homologues:
Organism=Homo sapiens, GI109389362, Length=366, Percent_Identity=23.7704918032787, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI59797060, Length=366, Percent_Identity=23.224043715847, Blast_Score=91, Evalue=6e-18, Organism=Homo sapiens, GI146229331, Length=353, Percent_Identity=28.8951841359773, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI146229329, Length=353, Percent_Identity=28.8951841359773, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI6005990, Length=353, Percent_Identity=28.8951841359773, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI146229324, Length=353, Percent_Identity=28.8951841359773, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI4503899, Length=459, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=9e-15, Organism=Homo sapiens, GI157266309, Length=213, Percent_Identity=29.5774647887324, Blast_Score=79, Evalue=2e-14, Organism=Homo sapiens, GI58743319, Length=140, Percent_Identity=35, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI53831991, Length=150, Percent_Identity=32, Blast_Score=74, Evalue=8e-13, Organism=Homo sapiens, GI45430057, Length=235, Percent_Identity=28.936170212766, Blast_Score=72, Evalue=2e-12, Organism=Homo sapiens, GI31742482, Length=160, Percent_Identity=33.75, Blast_Score=70, Evalue=1e-11, Organism=Homo sapiens, GI71852584, Length=167, Percent_Identity=30.5389221556886, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI71852586, Length=167, Percent_Identity=30.5389221556886, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1790112, Length=316, Percent_Identity=25.3164556962025, Blast_Score=81, Evalue=3e-16, Organism=Escherichia coli, GI1790233, Length=354, Percent_Identity=25.7062146892655, Blast_Score=68, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17559078, Length=245, Percent_Identity=28.5714285714286, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI281366397, Length=441, Percent_Identity=23.3560090702948, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI281366395, Length=441, Percent_Identity=23.3560090702948, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24666163, Length=441, Percent_Identity=23.3560090702948, Blast_Score=95, Evalue=2e-19, Organism=Drosophila melanogaster, GI24666175, Length=478, Percent_Identity=23.0125523012552, Blast_Score=91, Evalue=3e-18, Organism=Drosophila melanogaster, GI281363223, Length=512, Percent_Identity=22.65625, Blast_Score=90, Evalue=6e-18, Organism=Drosophila melanogaster, GI24666109, Length=455, Percent_Identity=24.6153846153846, Blast_Score=85, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: =3.1.6.1 [H]
Molecular weight: Translated: 85425; Mature: 85425
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: PS00523 SULFATASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAIRSALRLSARKRRLCGGSAIAALLAPTFVLAETAPADPLAGKVGRTVQVTHAPAWPA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCHHCCCCEEEEEECCCCCC QPQAPKGAPNVLVILTDDVGFGVTSAFGGPVPTATFDALAQTGLRYNRFNTTALCSPTRA CCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCEECCCCCEEECCCHHH SLLTGRLPQNVDMGNVTNLPTGFDGYTTVIPQSAATVAEVLKENGFNTAMFGKSHLTPEW HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCC QTSAAGPFDQWPTGLGFEYFYGFLSADTSMWQPSIVENTLPVEPPHDDPNYFFEKDMADH CCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH AIKWMRTQQAAAPDKPFFMYYAPGIAHTPHHAPKEWLEKFRGKFDQGWDKLREETFARQK HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH RMGIIPANSRLSPRPATLPAWDSLNADQKKLYSRLMEAYAASVSYSDHQTGRLIEAIRET HCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GELDNTLIIYIQGDNGSSAEGGPEGLLYEQSTITGRKETMAEKLSHIDDIGGPKLYNHFP CCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCC AAWAWATNSPFPWWKQVASQAGGVRNGMVVSWPKRITERGVIRSQYAHVSDIAPTVLDAV CEEEECCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHH GIKSPDLIKGIRQKPVDGISLAYTFQQGSAPSARRMQIYEMMENFGIYKDGWMAGTLPKR CCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCH AAWEAGAAGDRKLSVGPDEREWSLFNLDADFTTAKDLAKQNPAKLKEMQDLFWAEAARNN HHCCCCCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCC ILPIHDYSQGTEGRPSLGAYRSSFTYRPGTATIAEDAAPHTIGKSFRIDADVTAGSSTNG CEEECCCCCCCCCCCCHHHHHCCCEECCCCCCHHCCCCCCCCCCCEEEECCEECCCCCCC VMIAQGGRFGGYSFYLKDGRPTFHYNAVGADAFTVAAGSALAEGKHTLSAEFTADKTVPG EEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCCHHHCCCCEEEEEECCCCCCCC TPGTLTLYVDGKAVGSSRLGRTVAGWMSHTEGLDVGLDRISAVSPDYSVQDSAFTGEIDE CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH VRVSIK EEEEEC >Mature Secondary Structure MRAIRSALRLSARKRRLCGGSAIAALLAPTFVLAETAPADPLAGKVGRTVQVTHAPAWPA CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCHHCCCCEEEEEECCCCCC QPQAPKGAPNVLVILTDDVGFGVTSAFGGPVPTATFDALAQTGLRYNRFNTTALCSPTRA CCCCCCCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHHCCCEECCCCCEEECCCHHH SLLTGRLPQNVDMGNVTNLPTGFDGYTTVIPQSAATVAEVLKENGFNTAMFGKSHLTPEW HHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCCEEECCCCCCCCCC QTSAAGPFDQWPTGLGFEYFYGFLSADTSMWQPSIVENTLPVEPPHDDPNYFFEKDMADH CCCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHH AIKWMRTQQAAAPDKPFFMYYAPGIAHTPHHAPKEWLEKFRGKFDQGWDKLREETFARQK HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH RMGIIPANSRLSPRPATLPAWDSLNADQKKLYSRLMEAYAASVSYSDHQTGRLIEAIRET HCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH GELDNTLIIYIQGDNGSSAEGGPEGLLYEQSTITGRKETMAEKLSHIDDIGGPKLYNHFP CCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHCCC AAWAWATNSPFPWWKQVASQAGGVRNGMVVSWPKRITERGVIRSQYAHVSDIAPTVLDAV CEEEECCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHH GIKSPDLIKGIRQKPVDGISLAYTFQQGSAPSARRMQIYEMMENFGIYKDGWMAGTLPKR CCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCCCH AAWEAGAAGDRKLSVGPDEREWSLFNLDADFTTAKDLAKQNPAKLKEMQDLFWAEAARNN HHCCCCCCCCCEECCCCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCC ILPIHDYSQGTEGRPSLGAYRSSFTYRPGTATIAEDAAPHTIGKSFRIDADVTAGSSTNG CEEECCCCCCCCCCCCHHHHHCCCEECCCCCCHHCCCCCCCCCCCEEEECCEECCCCCCC VMIAQGGRFGGYSFYLKDGRPTFHYNAVGADAFTVAAGSALAEGKHTLSAEFTADKTVPG EEEECCCCCCCEEEEEECCCCEEEEECCCCCHHHHHCCCHHHCCCCEEEEEECCCCCCCC TPGTLTLYVDGKAVGSSRLGRTVAGWMSHTEGLDVGLDRISAVSPDYSVQDSAFTGEIDE CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH VRVSIK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10336424 [H]