| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200479
Identifier: 87200479
GI number: 87200479
Start: 2661639
End: 2662601
Strand: Direct
Name: 87200479
Synonym: Saro_2466
Alternate gene names: NA
Gene position: 2661639-2662601 (Clockwise)
Preceding gene: 87200478
Following gene: 87200480
Centisome position: 74.73
GC content: 55.97
Gene sequence:
>963_bases ATGAGGCTGTCTCACATAAAATTGAACCGCGCAAAGGGTGCCTCGGATCTCAGGCATCTGCTGTCAGAGCCACATGCGAA GATCGCTCTGATCTGCCTTACCCTGATAGCGATCCTTCACATTCTCGTACTACCTCTGACCGACTTCTATATTTCTTCGG GAGATTGGTTGAGTGGGCTTCTGTTATCCGCATGGGTTCTTCTTGGGGGCATTGTAGCGCTAGGCTCCGGCTTGGAGCGC ACCGGACTGGCAATGCTCGCCTTTGCAGTTCCGATGGAGCTTGGCCTCCTTGTCTCAGGCGGCGTCCTGTATCTCGGAGC AATATCGGTGCCTTTTGTCGACCCGTGGCTCCACGCGGCGGACAGGAGCATTGGCTTTGATTTTCGGTGGCTCTCCCAAG TCTACGCCGACAATCCCGCCATCATGAGCATTTCGAGATTTGCCTACTCGTCTCTTGCAATCCAGACCATCGTGATTCCA GTCGTGATGGCGGTCACGCTTCCGCCCAAGAGGCTGCTCCACTTCATCGCCGCGTATTCGCTGACGCTCACGATAACAGT GGCCGTCTTTCCTCTTTTTCCGGCGGAGGGTCCCTACGTCTACTACAATATCCCATTGGAAAGAGCGCCGTATCTGGACC GCCTGTTCCCTTGGGAAACGGGGATCAAGATCGAGAAGCTGAGACTGGGATACCTCCGCGACGTAACGTCTGAAGCGGCG GGCCTTGTTTCCTTTCCCAGCTTTCATGCTGCCAGTGCGATTCTACTTGGATGGGCCTCGTTGTCGTGGCTCTGGGTTCG CGGTCCAATCCTGCTGCTCAACGCGGTGATGCTATTCTCGACCATCGTCTGCGGAGCGCATTACCTCGTTGACCTTATTG GAGGCGTCGTGCTTGCCGCCGGTGTGATCTATTGGACCGGACGGTGCTGTCAGCACAACGCGAACTCGCCCCATTCAACG TAA
Upstream 100 bases:
>100_bases AGATTTACCGGTCGCTAATTCTGAGACACTTGAAGAGCAGTTCGAGAATAGCTCTAACGACAGCTCATGCTAGACTCCGG CTCTGAATTTGGGAGGCATG
Downstream 100 bases:
>100_bases GCCGCAAGAGCCATTGGCTCACGCAAGGCACAGGCAAACTTCAAACTCCCAATCGTAACTGTGCTTGGGCACGGTTGTGC TTCCATGCTAAATTGCCGCG
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRLSHIKLNRAKGASDLRHLLSEPHAKIALICLTLIAILHILVLPLTDFYISSGDWLSGLLLSAWVLLGGIVALGSGLER TGLAMLAFAVPMELGLLVSGGVLYLGAISVPFVDPWLHAADRSIGFDFRWLSQVYADNPAIMSISRFAYSSLAIQTIVIP VVMAVTLPPKRLLHFIAAYSLTLTITVAVFPLFPAEGPYVYYNIPLERAPYLDRLFPWETGIKIEKLRLGYLRDVTSEAA GLVSFPSFHAASAILLGWASLSWLWVRGPILLLNAVMLFSTIVCGAHYLVDLIGGVVLAAGVIYWTGRCCQHNANSPHST
Sequences:
>Translated_320_residues MRLSHIKLNRAKGASDLRHLLSEPHAKIALICLTLIAILHILVLPLTDFYISSGDWLSGLLLSAWVLLGGIVALGSGLER TGLAMLAFAVPMELGLLVSGGVLYLGAISVPFVDPWLHAADRSIGFDFRWLSQVYADNPAIMSISRFAYSSLAIQTIVIP VVMAVTLPPKRLLHFIAAYSLTLTITVAVFPLFPAEGPYVYYNIPLERAPYLDRLFPWETGIKIEKLRLGYLRDVTSEAA GLVSFPSFHAASAILLGWASLSWLWVRGPILLLNAVMLFSTIVCGAHYLVDLIGGVVLAAGVIYWTGRCCQHNANSPHST >Mature_320_residues MRLSHIKLNRAKGASDLRHLLSEPHAKIALICLTLIAILHILVLPLTDFYISSGDWLSGLLLSAWVLLGGIVALGSGLER TGLAMLAFAVPMELGLLVSGGVLYLGAISVPFVDPWLHAADRSIGFDFRWLSQVYADNPAIMSISRFAYSSLAIQTIVIP VVMAVTLPPKRLLHFIAAYSLTLTITVAVFPLFPAEGPYVYYNIPLERAPYLDRLFPWETGIKIEKLRLGYLRDVTSEAA GLVSFPSFHAASAILLGWASLSWLWVRGPILLLNAVMLFSTIVCGAHYLVDLIGGVVLAAGVIYWTGRCCQHNANSPHST
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34876; Mature: 34876
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSHIKLNRAKGASDLRHLLSEPHAKIALICLTLIAILHILVLPLTDFYISSGDWLSGL CCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLSAWVLLGGIVALGSGLERTGLAMLAFAVPMELGLLVSGGVLYLGAISVPFVDPWLHAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH DRSIGFDFRWLSQVYADNPAIMSISRFAYSSLAIQTIVIPVVMAVTLPPKRLLHFIAAYS CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LTLTITVAVFPLFPAEGPYVYYNIPLERAPYLDRLFPWETGIKIEKLRLGYLRDVTSEAA HHHEEEEHHEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHC GLVSFPSFHAASAILLGWASLSWLWVRGPILLLNAVMLFSTIVCGAHYLVDLIGGVVLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIYWTGRCCQHNANSPHST HHHHHCCHHHCCCCCCCCCC >Mature Secondary Structure MRLSHIKLNRAKGASDLRHLLSEPHAKIALICLTLIAILHILVLPLTDFYISSGDWLSGL CCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LLSAWVLLGGIVALGSGLERTGLAMLAFAVPMELGLLVSGGVLYLGAISVPFVDPWLHAA HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH DRSIGFDFRWLSQVYADNPAIMSISRFAYSSLAIQTIVIPVVMAVTLPPKRLLHFIAAYS CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LTLTITVAVFPLFPAEGPYVYYNIPLERAPYLDRLFPWETGIKIEKLRLGYLRDVTSEAA HHHEEEEHHEECCCCCCCEEEEECCCCCCCCHHHHCCCCCCCEEEHHHHHHHHHHHHHHC GLVSFPSFHAASAILLGWASLSWLWVRGPILLLNAVMLFSTIVCGAHYLVDLIGGVVLAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVIYWTGRCCQHNANSPHST HHHHHCCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA