| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is exeA [H]
Identifier: 87200346
GI number: 87200346
Start: 2478089
End: 2479357
Strand: Reverse
Name: exeA [H]
Synonym: Saro_2332
Alternate gene names: 87200346
Gene position: 2479357-2478089 (Counterclockwise)
Preceding gene: 87200347
Following gene: 87200345
Centisome position: 69.61
GC content: 67.77
Gene sequence:
>1269_bases ATGTACGATGAATTCTATGGCCTTTCGGCCCGCCCGTTCCAGCTCACGCCGGACCCGCGCTTCTATTTCGAGAGCGGGAC GCATCGCAAGGCATTGTCATACCTCGGTTATGGCCTTGCGCAGGGTGAGGGCTTCATAGTCATCACCGGCGAAGTCGGCG CGGGCAAGTCGACGCTGGCCGCCCATCTCATGGCGACGGTCGACCGGGCGCGACTCACTGCCGCGCAGATCGTGACTTCG GCTCTCGACGGCGAGGAACTGATCCATGTCGCCGCGCGTGCCTTCGGGCTGGAAGTGGCCGGGCACGACAAGGCCACCGC GCTCGCGCAGATCGAGGCGTTCCTCCACCACGAGGCCCGCGAAGGCCGTCGCTGCCTGCTGGTGGTGGACGAATCGCAGA ACCTTTCGGTCGAGGCGCTGGAAGAGCTGCGCATGCTCTCCAACTTCCAGCTCGGTTCGCATCCGCTGCTGCAGATCCTG CTGCTCGGCCAACCCGAGTTCCGCACCCTGCTGCAGACGTCGGGCGAGCTTGAGCAGCTGCGCCAGCGGGTGATCGCGTC GCATCACCTCGATGCGATGGAGCCCGCCGAAGTCGGTTCCTATGTCGAGCATCGCCTGTCGCTTGTCGGCTGGCAGGGAC GCCCGCAGTTCGACGCGCGCGTCTATGCCGATCTTGCCCGGGCCAGCGGCGGCGTGCCGCGCAGGATCAACCAGATCGTC AACCGGCTCATGCTGATGGGCGCGGTGGAGCAGCGCGATCACATCGATGCGGCGATGCTTCAGGACGTTCTGGCGGACCT TGCGGTTGACGGCGCATTCGGCAGTCCGCAGCCAGAGGTGTCGCCCGCCACACGGGCCGAAGCGCCACGGATCGAGATGC CCGCCGCACCTGTCGCTACGGTCGCACCGGCCGCCCCTGCGGCGCCCGCCTTCGACGACAGTGCGTGGCGTGCCGCATTG GCCGAGCGCGACGAGCAGATTGCCGAGCTTCAGCAGGCGATCATCGAATTGGCCGACCTGCGCGCCGAGCCGGTCGCGCG GGTGCCCGATTTCGATCTTGCCGCGCAGCTCGAGGAAGCCAACCGCCGCATCGCCGCGCTCGAGGCCCGGCCCGGCGACG AACAGGTCGTGGCGGCGCTGGCCGAGGCGCAGCGCCGCATCGCCGCGCTGGAATCGCGCACCAGCGAGCAGGAGCAGGCG ATCCGCCATACCCTGACCATGCTGATCGAGTGGATCGAGGCCGAAGACTTCCATCGCGCGGCTGCCTGA
Upstream 100 bases:
>100_bases CAGTTTGGACAGTGTTAACCGTAAGGTGATTGAAGACGAGGTAGTAGCGTCCGGCCTGGTTGGCCTGCGCTATTCTTTCT GATGCCCGGAGACGGCTTCG
Downstream 100 bases:
>100_bases GCCGCGCCACAAGGGGACTTGAGCAATGGGCGCGGCCGCCGGGCAGGTGCTGAACGGGCTTTCGGTCGACGTCGAGGACT GGTTCCAGGTCGGCGCGTTC
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MYDEFYGLSARPFQLTPDPRFYFESGTHRKALSYLGYGLAQGEGFIVITGEVGAGKSTLAAHLMATVDRARLTAAQIVTS ALDGEELIHVAARAFGLEVAGHDKATALAQIEAFLHHEAREGRRCLLVVDESQNLSVEALEELRMLSNFQLGSHPLLQIL LLGQPEFRTLLQTSGELEQLRQRVIASHHLDAMEPAEVGSYVEHRLSLVGWQGRPQFDARVYADLARASGGVPRRINQIV NRLMLMGAVEQRDHIDAAMLQDVLADLAVDGAFGSPQPEVSPATRAEAPRIEMPAAPVATVAPAAPAAPAFDDSAWRAAL AERDEQIAELQQAIIELADLRAEPVARVPDFDLAAQLEEANRRIAALEARPGDEQVVAALAEAQRRIAALESRTSEQEQA IRHTLTMLIEWIEAEDFHRAAA
Sequences:
>Translated_422_residues MYDEFYGLSARPFQLTPDPRFYFESGTHRKALSYLGYGLAQGEGFIVITGEVGAGKSTLAAHLMATVDRARLTAAQIVTS ALDGEELIHVAARAFGLEVAGHDKATALAQIEAFLHHEAREGRRCLLVVDESQNLSVEALEELRMLSNFQLGSHPLLQIL LLGQPEFRTLLQTSGELEQLRQRVIASHHLDAMEPAEVGSYVEHRLSLVGWQGRPQFDARVYADLARASGGVPRRINQIV NRLMLMGAVEQRDHIDAAMLQDVLADLAVDGAFGSPQPEVSPATRAEAPRIEMPAAPVATVAPAAPAAPAFDDSAWRAAL AERDEQIAELQQAIIELADLRAEPVARVPDFDLAAQLEEANRRIAALEARPGDEQVVAALAEAQRRIAALESRTSEQEQA IRHTLTMLIEWIEAEDFHRAAA >Mature_422_residues MYDEFYGLSARPFQLTPDPRFYFESGTHRKALSYLGYGLAQGEGFIVITGEVGAGKSTLAAHLMATVDRARLTAAQIVTS ALDGEELIHVAARAFGLEVAGHDKATALAQIEAFLHHEAREGRRCLLVVDESQNLSVEALEELRMLSNFQLGSHPLLQIL LLGQPEFRTLLQTSGELEQLRQRVIASHHLDAMEPAEVGSYVEHRLSLVGWQGRPQFDARVYADLARASGGVPRRINQIV NRLMLMGAVEQRDHIDAAMLQDVLADLAVDGAFGSPQPEVSPATRAEAPRIEMPAAPVATVAPAAPAAPAFDDSAWRAAL AERDEQIAELQQAIIELADLRAEPVARVPDFDLAAQLEEANRRIAALEARPGDEQVVAALAEAQRRIAALESRTSEQEQA IRHTLTMLIEWIEAEDFHRAAA
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3267
COG function: function code U; Type II secretory pathway, component ExeA (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the exeA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR002477 [H]
Pfam domain/function: PF00004 AAA; PF01471 PG_binding_1 [H]
EC number: NA
Molecular weight: Translated: 46098; Mature: 46098
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDEFYGLSARPFQLTPDPRFYFESGTHRKALSYLGYGLAQGEGFIVITGEVGAGKSTLA CCCCCCCCCCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH AHLMATVDRARLTAAQIVTSALDGEELIHVAARAFGLEVAGHDKATALAQIEAFLHHEAR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHH EGRRCLLVVDESQNLSVEALEELRMLSNFQLGSHPLLQILLLGQPEFRTLLQTSGELEQL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHH RQRVIASHHLDAMEPAEVGSYVEHRLSLVGWQGRPQFDARVYADLARASGGVPRRINQIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH NRLMLMGAVEQRDHIDAAMLQDVLADLAVDGAFGSPQPEVSPATRAEAPRIEMPAAPVAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VAPAAPAAPAFDDSAWRAALAERDEQIAELQQAIIELADLRAEPVARVPDFDLAAQLEEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH NRRIAALEARPGDEQVVAALAEAQRRIAALESRTSEQEQAIRHTLTMLIEWIEAEDFHRA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AA CC >Mature Secondary Structure MYDEFYGLSARPFQLTPDPRFYFESGTHRKALSYLGYGLAQGEGFIVITGEVGAGKSTLA CCCCCCCCCCCCEECCCCCCEEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHH AHLMATVDRARLTAAQIVTSALDGEELIHVAARAFGLEVAGHDKATALAQIEAFLHHEAR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHH EGRRCLLVVDESQNLSVEALEELRMLSNFQLGSHPLLQILLLGQPEFRTLLQTSGELEQL CCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHCCCHHHHH RQRVIASHHLDAMEPAEVGSYVEHRLSLVGWQGRPQFDARVYADLARASGGVPRRINQIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHH NRLMLMGAVEQRDHIDAAMLQDVLADLAVDGAFGSPQPEVSPATRAEAPRIEMPAAPVAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH VAPAAPAAPAFDDSAWRAALAERDEQIAELQQAIIELADLRAEPVARVPDFDLAAQLEEA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH NRRIAALEARPGDEQVVAALAEAQRRIAALESRTSEQEQAIRHTLTMLIEWIEAEDFHRA CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH AA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7961440 [H]