Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200335

Identifier: 87200335

GI number: 87200335

Start: 2465491

End: 2466180

Strand: Direct

Name: 87200335

Synonym: Saro_2321

Alternate gene names: NA

Gene position: 2465491-2466180 (Clockwise)

Preceding gene: 87200332

Following gene: 87200336

Centisome position: 69.22

GC content: 55.07

Gene sequence:

>690_bases
ATGAAGATGATAATAAGTTACGGGATGCCCAAATCAGCGAGTACCTTCGCGTGGCTCGTCATCAAGAAGATCTGCTTGAA
CTCCCGACTTGACGACGTCGTCGATCTGTCGACTGCCGCGAAGGGGAACGACAGTGTTGAAGACTACATTGACGGCTCGG
TAAAGGTGAACGCCGCGCAGATCACCAGGGAAGTGGGCGAACGCTGCTGCGTCATAAAGACCCACTCTTCTGCAGTCCAT
TTCCGTACGCTGGTCGGTGGCAGCGCATTCTTCCTGCCGTTTGCCCAGCACCGCGATCCGCGCGACGTCGCCCTGTCGCT
CATGGATCACGCCAGAAGGTCGAGGGAACTTGGGATCGCCGATTATGCGGATTGCTTGTCGATCGAGGGCTGCCTTCCCG
TTATTGACAGTTCCATCGAGAATTTCATCGAGTGGGTTGACCAGTACAGTGCCATACCGATCTCGTACGACTATCTATGT
TTCAATGGGTTGGCATGCCTGTCGTTCATCGCCAGCGCACTGGACTGCGATGTCGATTGCGCGGCGATCCTCAAAGGGTT
CGAAAGGAAGGAGAGCATCGCGCAATTCAACAAGGGAATTCGCCACAGATGGGTCGACGAGATGCCACAAGCTCAGGCGC
GTATGCTTTTCCGGCGTTACGAGGAATACTATGACCGGTTCGGAGCATGA

Upstream 100 bases:

>100_bases
GGACCAGAGTGGATGGTGCGACCATCCGGACCGTGACGGGGAACGCAAACATCACGCGAACACCCAGAGCGCAAAAGGTG
AGAGGATCAGGGCCTGAACG

Downstream 100 bases:

>100_bases
GTATCTGACCGCACTTCTGCCGACCGAAGTGCGGGTCACGAGCCGGAACCGGCGTTTGCTTTCTGGACAGTGTAAACCGT
GTAAACACCCTTCGCATATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MKMIISYGMPKSASTFAWLVIKKICLNSRLDDVVDLSTAAKGNDSVEDYIDGSVKVNAAQITREVGERCCVIKTHSSAVH
FRTLVGGSAFFLPFAQHRDPRDVALSLMDHARRSRELGIADYADCLSIEGCLPVIDSSIENFIEWVDQYSAIPISYDYLC
FNGLACLSFIASALDCDVDCAAILKGFERKESIAQFNKGIRHRWVDEMPQAQARMLFRRYEEYYDRFGA

Sequences:

>Translated_229_residues
MKMIISYGMPKSASTFAWLVIKKICLNSRLDDVVDLSTAAKGNDSVEDYIDGSVKVNAAQITREVGERCCVIKTHSSAVH
FRTLVGGSAFFLPFAQHRDPRDVALSLMDHARRSRELGIADYADCLSIEGCLPVIDSSIENFIEWVDQYSAIPISYDYLC
FNGLACLSFIASALDCDVDCAAILKGFERKESIAQFNKGIRHRWVDEMPQAQARMLFRRYEEYYDRFGA
>Mature_229_residues
MKMIISYGMPKSASTFAWLVIKKICLNSRLDDVVDLSTAAKGNDSVEDYIDGSVKVNAAQITREVGERCCVIKTHSSAVH
FRTLVGGSAFFLPFAQHRDPRDVALSLMDHARRSRELGIADYADCLSIEGCLPVIDSSIENFIEWVDQYSAIPISYDYLC
FNGLACLSFIASALDCDVDCAAILKGFERKESIAQFNKGIRHRWVDEMPQAQARMLFRRYEEYYDRFGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25780; Mature: 25780

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMIISYGMPKSASTFAWLVIKKICLNSRLDDVVDLSTAAKGNDSVEDYIDGSVKVNAAQ
CCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHH
ITREVGERCCVIKTHSSAVHFRTLVGGSAFFLPFAQHRDPRDVALSLMDHARRSRELGIA
HHHHHHCCEEEEEECCCHHHHHHHHCCCHHEECHHHCCCHHHHHHHHHHHHHHHHCCCCH
DYADCLSIEGCLPVIDSSIENFIEWVDQYSAIPISYDYLCFNGLACLSFIASALDCDVDC
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
AAILKGFERKESIAQFNKGIRHRWVDEMPQAQARMLFRRYEEYYDRFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMIISYGMPKSASTFAWLVIKKICLNSRLDDVVDLSTAAKGNDSVEDYIDGSVKVNAAQ
CCEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHCCCCEEEHHHH
ITREVGERCCVIKTHSSAVHFRTLVGGSAFFLPFAQHRDPRDVALSLMDHARRSRELGIA
HHHHHHCCEEEEEECCCHHHHHHHHCCCHHEECHHHCCCHHHHHHHHHHHHHHHHCCCCH
DYADCLSIEGCLPVIDSSIENFIEWVDQYSAIPISYDYLCFNGLACLSFIASALDCDVDC
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHH
AAILKGFERKESIAQFNKGIRHRWVDEMPQAQARMLFRRYEEYYDRFGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA