| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200325
Identifier: 87200325
GI number: 87200325
Start: 2451614
End: 2452210
Strand: Direct
Name: 87200325
Synonym: Saro_2311
Alternate gene names: NA
Gene position: 2451614-2452210 (Clockwise)
Preceding gene: 87200324
Following gene: 87200332
Centisome position: 68.83
GC content: 64.15
Gene sequence:
>597_bases ATGAGACATGTGCCAGCCATGGCGAACCACGATGAAGACCTCTCGCTGGCGAGCAGGCTATGTTTGGCCTGCGGCTTATG CTGCGACGGAACGGTCTACGAACAGGCGGCGGTCAGGCCGGAAGACATCGCCCCTGCCAATGCCTGCGGGTTCCGCCTCT TCAAGACCGAACAGGACCGTCAGGTCTTCCTGTTTCCCTGTCATTACCTCGAAGATTCGGCGTGCACGCGCTACGACCAG TGGCGTCCGTCCGTCTGCGGTTCCTTCTTCTGCCTCATGCAGAAGCGCGTGGCTGAGGGAGAGTGCAGCGAAGCAGAGGG CTTTTCGCTGATCGAGCGGGCCAAGAGCCTGCGGTCCGCCGTATTGGCGCTACTCAAGCCTGGCCAGCACTTCCTCTGGG CGCGGTCGCGTTTCGATGCCCTGGCTGGCGCGAAGGCGGATCTCGCGCCAGCGGATGCGCAACTGGTGGTTCGCATGTTC GTGCTGGAGCGCTTCCTCGACCAGCACTTCCGCAAGCCCGGCAAGAAGCGCCTGCCAGGCGGGGCGATCGCTCGTCCTGC GGTAGAGGCCGCCCCGGACGATACCAAGGCGGCCTGA
Upstream 100 bases:
>100_bases TTGGCGCAGCACTTCCCCGATGACGGATAATTAATGTACCCAGCGACTGCACAACGTCGAAATTCGGGCTAACGTTCGAC AGATAGATAATTTCCCTTAC
Downstream 100 bases:
>100_bases AGCGCTTTCAGTCGCCGGTCAGGATGCGATCGACCAACTGCTTCACCGTCGGGGTGAAGTTGTTCGAATAGAACGGGTCC TGCTTGAAGCGGTATGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRHVPAMANHDEDLSLASRLCLACGLCCDGTVYEQAAVRPEDIAPANACGFRLFKTEQDRQVFLFPCHYLEDSACTRYDQ WRPSVCGSFFCLMQKRVAEGECSEAEGFSLIERAKSLRSAVLALLKPGQHFLWARSRFDALAGAKADLAPADAQLVVRMF VLERFLDQHFRKPGKKRLPGGAIARPAVEAAPDDTKAA
Sequences:
>Translated_198_residues MRHVPAMANHDEDLSLASRLCLACGLCCDGTVYEQAAVRPEDIAPANACGFRLFKTEQDRQVFLFPCHYLEDSACTRYDQ WRPSVCGSFFCLMQKRVAEGECSEAEGFSLIERAKSLRSAVLALLKPGQHFLWARSRFDALAGAKADLAPADAQLVVRMF VLERFLDQHFRKPGKKRLPGGAIARPAVEAAPDDTKAA >Mature_198_residues MRHVPAMANHDEDLSLASRLCLACGLCCDGTVYEQAAVRPEDIAPANACGFRLFKTEQDRQVFLFPCHYLEDSACTRYDQ WRPSVCGSFFCLMQKRVAEGECSEAEGFSLIERAKSLRSAVLALLKPGQHFLWARSRFDALAGAKADLAPADAQLVVRMF VLERFLDQHFRKPGKKRLPGGAIARPAVEAAPDDTKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21905; Mature: 21905
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVPAMANHDEDLSLASRLCLACGLCCDGTVYEQAAVRPEDIAPANACGFRLFKTEQDR CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHCEEEEECCCCC QVFLFPCHYLEDSACTRYDQWRPSVCGSFFCLMQKRVAEGECSEAEGFSLIERAKSLRSA EEEEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VLALLKPGQHFLWARSRFDALAGAKADLAPADAQLVVRMFVLERFLDQHFRKPGKKRLPG HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAIARPAVEAAPDDTKAA CCCCCCCHHCCCCCCCCC >Mature Secondary Structure MRHVPAMANHDEDLSLASRLCLACGLCCDGTVYEQAAVRPEDIAPANACGFRLFKTEQDR CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCHHCEEEEECCCCC QVFLFPCHYLEDSACTRYDQWRPSVCGSFFCLMQKRVAEGECSEAEGFSLIERAKSLRSA EEEEEEHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH VLALLKPGQHFLWARSRFDALAGAKADLAPADAQLVVRMFVLERFLDQHFRKPGKKRLPG HHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC GAIARPAVEAAPDDTKAA CCCCCCCHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA