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The map label for this gene is nuoJ [H]

Identifier: 87200305

GI number: 87200305

Start: 2433437

End: 2434054

Strand: Reverse

Name: nuoJ [H]

Synonym: Saro_2291

Alternate gene names: 87200305

Gene position: 2434054-2433437 (Counterclockwise)

Preceding gene: 87200306

Following gene: 87200304

Centisome position: 68.34

GC content: 62.78

Gene sequence:

>618_bases
ATGATCCAGGTATTCGCCTTCTATCTCTTCGCCACGCTGTGCATCTTCAGCGGCGCGGTGACGATCCTTGCCCGCAACCC
GGTGCATTCGGTTCTGTGGCTGATTCTCGCGTTCTTCAACGCAGCCGGCCTGATGGTGCTGGCAGGCGCCGAATTCATCG
CGATGCTGCTGGTCATCGTCTACGTCGGCGCGGTCGCGGTGTTGTTCCTGTTCGTGGTGATGATGCTCGATATCGATTTT
GCCGAACTGCGCGCCGGGTTCATCAAGAACTTCCCGCTGGGCATGGCGCTGGCGGTCGTGCTGTTCGTCGAACTCTTCGT
GGGACTGGTCGTGCGCGGCTCGGGCGCTGTCGCGCTGGGCAAGGCTGACGGTTCGGCGATGCAGGCGGCGGGCGCTTCCA
ATATCGAGTCGATCGGCGCTCTCCTCTACAGCCGCTACCTGTTCCTGTTCGAAGCGGCAGGCATCGTCCTGCTGGTCGCG
ATGATCGGCGCAATCGTGCTGACCCATCGCCAGCGCACCGACACGCGCGGCCAGAACGTCTCTAAGCAGGTCGCGCGTCG
TCCAGAGGACGCCACCGTCAATCTCCAGCCGGAAGTGGGCAAGGGGGTCCAGATCTGA

Upstream 100 bases:

>100_bases
GCTCCTTTCGAACGGCGACAAGTGGGAGCGGGCGATTGCCGCGAACCTTGAAGCCGATGCGCCGTATCGCTAGGGGCCCC
ACGTTCATGGAATACGGCCA

Downstream 100 bases:

>100_bases
TGATCGGCATCGAACACTATCTCGTCGTCAGCTCGATCCTGTTCGTGCTCGGCGTCCTGGGCATCTTCCTCAACCGGAAG
AACGTGATCATCATCCTGAT

Product: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIVYVGAVAVLFLFVVMMLDIDF
AELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALGKADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVA
MIGAIVLTHRQRTDTRGQNVSKQVARRPEDATVNLQPEVGKGVQI

Sequences:

>Translated_205_residues
MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIVYVGAVAVLFLFVVMMLDIDF
AELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALGKADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVA
MIGAIVLTHRQRTDTRGQNVSKQVARRPEDATVNLQPEVGKGVQI
>Mature_205_residues
MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIVYVGAVAVLFLFVVMMLDIDF
AELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALGKADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVA
MIGAIVLTHRQRTDTRGQNVSKQVARRPEDATVNLQPEVGKGVQI

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=191, Percent_Identity=29.8429319371728, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 21899; Mature: 21899

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIV
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVAVLFLFVVMMLDIDFAELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVAMIGAIVLTHRQRTDTRGQNV
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SKQVARRPEDATVNLQPEVGKGVQI
HHHHHCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MIQVFAFYLFATLCIFSGAVTILARNPVHSVLWLILAFFNAAGLMVLAGAEFIAMLLVIV
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVAVLFLFVVMMLDIDFAELRAGFIKNFPLGMALAVVLFVELFVGLVVRGSGAVALG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEE
KADGSAMQAAGASNIESIGALLYSRYLFLFEAAGIVLLVAMIGAIVLTHRQRTDTRGQNV
CCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
SKQVARRPEDATVNLQPEVGKGVQI
HHHHHCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]