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The map label for this gene is yfhQ [C]

Identifier: 87200257

GI number: 87200257

Start: 2384860

End: 2385615

Strand: Direct

Name: yfhQ [C]

Synonym: Saro_2243

Alternate gene names: 87200257

Gene position: 2384860-2385615 (Clockwise)

Preceding gene: 87200256

Following gene: 87200259

Centisome position: 66.96

GC content: 66.93

Gene sequence:

>756_bases
GTGAATGAGGCAGAAGGCGCCGCGCGCCACCCGGTAATCGTCCTGGTTCGGCCGCAGCTTGGCGAAAACATCGGCAAGGC
CGCGCGCGCAATGCTCAACTTCGGCCTTGCCGAGATGCGCCTCGTCTCGCCGCGCGATGGCTGGCCCAATCCTTCCGCCG
GCCCCGCCGCGGCAGGCGCGGACATTGTGCTTGAAAGGGCCCAGGTCTTCCCGACGCTTGCCGAAGCCGTTGCCGATTGC
AGCCACGTCTATGCCACGACAGTCCGCAAGCGCGGCGTGACGAAGCCGGTGCTGACACCCGAACAGGCCGCCAGGGACAT
CGTTTCCGCGTCGGGGCGCAGCGCGATAATCTTCGGGCCTGAACGTTCGGGCCTCGAGACCGATGACGTGGCGCTGGCCC
GTGCGATCGTGACCGTGCCGATCAATCCGGAGTTCGGATCGCTCAACCTCGCGCAGGCGGTGATCCTGTGCGCCTACGAA
TGGTCGAAGCACGTCGATCTCGTGCAGCCGACCGTGGAGGACATGCTGCCCCCTGCGCCGCAGGAGGAGTTCGAGGGCAT
GTTCGAACAACTCTGCACGATGCTGGAACCGCGCGGTTACTTCGAACCGGAGAGCCGCGCCGCGTCCACCCGCCGCACGT
TGCGCACCATGCTGACCAAGCCGGGCTGGAACCATCTGGAAGTCCGCACCATGCGCGGCGTGCTTAGCGCTTTGCGCCGG
AAGCCGGGCTCCCGCCCCGGCGATTCGACGGACTAG

Upstream 100 bases:

>100_bases
ATCCGCTTCGCCAGCGTCTATCGCGACTTCACAGAAGCACGCGACTTTGAGGAGTTCGCCAGCAGCGTGCAGGAAATGAG
CGTGCACGAGGTTTCAGGCG

Downstream 100 bases:

>100_bases
GTTTTTCTGGCCTGTTCACGCATCGCGGCAGAAGCATCGAGCATCCGGTCCCAGAAATCGGTCACAAGACTGACGGGGAT
GCCGAGCTCGAAGGCCTTGC

Product: tRNA/rRNA methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNEAEGAARHPVIVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPTLAEAVADC
SHVYATTVRKRGVTKPVLTPEQAARDIVSASGRSAIIFGPERSGLETDDVALARAIVTVPINPEFGSLNLAQAVILCAYE
WSKHVDLVQPTVEDMLPPAPQEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRR
KPGSRPGDSTD

Sequences:

>Translated_251_residues
MNEAEGAARHPVIVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPTLAEAVADC
SHVYATTVRKRGVTKPVLTPEQAARDIVSASGRSAIIFGPERSGLETDDVALARAIVTVPINPEFGSLNLAQAVILCAYE
WSKHVDLVQPTVEDMLPPAPQEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRR
KPGSRPGDSTD
>Mature_251_residues
MNEAEGAARHPVIVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGADIVLERAQVFPTLAEAVADC
SHVYATTVRKRGVTKPVLTPEQAARDIVSASGRSAIIFGPERSGLETDDVALARAIVTVPINPEFGSLNLAQAVILCAYE
WSKHVDLVQPTVEDMLPPAPQEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRR
KPGSRPGDSTD

Specific function: Unknown

COG id: COG0565

COG function: function code J; rRNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase TrmH family [H]

Homologues:

Organism=Escherichia coli, GI1788881, Length=244, Percent_Identity=32.7868852459016, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1790865, Length=186, Percent_Identity=33.8709677419355, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004384
- InterPro:   IPR001537 [H]

Pfam domain/function: PF00588 SpoU_methylase [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27233; Mature: 27233

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEAEGAARHPVIVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGA
CCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCH
DIVLERAQVFPTLAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIVSASGRSAIIFGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
ERSGLETDDVALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDMLPPAP
CCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCC
QEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KPGSRPGDSTD
CCCCCCCCCCC
>Mature Secondary Structure
MNEAEGAARHPVIVLVRPQLGENIGKAARAMLNFGLAEMRLVSPRDGWPNPSAGPAAAGA
CCCCCCCCCCCEEEEECCHHCHHHHHHHHHHHHHCHHHEEEECCCCCCCCCCCCCCCCCH
DIVLERAQVFPTLAEAVADCSHVYATTVRKRGVTKPVLTPEQAARDIVSASGRSAIIFGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECC
ERSGLETDDVALARAIVTVPINPEFGSLNLAQAVILCAYEWSKHVDLVQPTVEDMLPPAP
CCCCCCHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHCCCCC
QEEFEGMFEQLCTMLEPRGYFEPESRAASTRRTLRTMLTKPGWNHLEVRTMRGVLSALRR
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KPGSRPGDSTD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]