| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200250
Identifier: 87200250
GI number: 87200250
Start: 2379628
End: 2380452
Strand: Direct
Name: 87200250
Synonym: Saro_2236
Alternate gene names: NA
Gene position: 2379628-2380452 (Clockwise)
Preceding gene: 87200249
Following gene: 87200253
Centisome position: 66.81
GC content: 67.15
Gene sequence:
>825_bases TTGACCAATGACGTCGCCGCCCCCGGACAGGACAGCCTGATCCGGGGGTATCGGCCCGAAGCCCTGCCGCTTCGCCTGCT GCGCCGCGAACTGCGCGACCTGCAGACCCACTTCCCGGCGATCCGCGCGGCGAAGTTCGACTTCTACAACATGGCGACGC GACGGCTGGGCCTGTTCGCCGACGCCGAGATCCGGCTGCTTTCACGGCTGGCGCCGGTCGGCCTCGCGCTCGATGTCGGG GGAAATTGGGGCCAGAGCGTCGTTGCCCTGCAACGCTACGCCCGCCCGCAGCGCATCGTCACGGTCGAGCCCATCCCCTT TCTAGCGGAACGCCTTCGCAGGAAGTATCCGCCCGGCGGCTCTGTGGAAGTGCTGGAGATGGGGCTCGGGCTGGACCGGG GCCAACAGCTTATCCACGTGCCGCGCTATCGCGGATACGTCTACGACGGGATCGCCTCGCTCGACAGGGAAGCAGCAGCC GCGTGGCTCGATCCGCGCCGCATGGCACGCTTTTCGCCGGCGCACCTCACCATCGATACGCACGAGGTGAAGGTCGAGCG GCTGGACGCGCTCGGCATTGCGCCAGATGTCATCAAGATCGACGTCCAGGGCTTCGAGGGACAGGTTATCGCCGGCGGGA TAAGAACCATCGCGGCCCACAAGCCAGTGGTGATCGTGGAGCGCCCTTCCGAAGCGGTCGTCGCGGCTCTGGCAAGGCTG GGCCTTGCGGCGCACGGTTGGAACGGACGAAAGCTCGTGGCGGGCGACCTCACGCGAAACAACGCGATCTTCCTTGGCCC GCAGCACAAGGCGCTGCTCGGCTAG
Upstream 100 bases:
>100_bases CAGCAGTTCTCGGTCACCCGCGAACGTATCCGCCAGATCGAGGCGAAGGCGCTGCGCAAGCTCAAGCACCCGAGCCGCAG CCGCAAGATGCGCTCGTTCC
Downstream 100 bases:
>100_bases CCCACCTTGTAGACCGACAGCCGTACCGTGTTGCCGACCTTGCCGCCCTTTGCGAGGAACAGCGCACGATTGACCCAGTC GTGGGCGGGGTGCCCGGTCT
Product: methyltransferase FkbM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MTNDVAAPGQDSLIRGYRPEALPLRLLRRELRDLQTHFPAIRAAKFDFYNMATRRLGLFADAEIRLLSRLAPVGLALDVG GNWGQSVVALQRYARPQRIVTVEPIPFLAERLRRKYPPGGSVEVLEMGLGLDRGQQLIHVPRYRGYVYDGIASLDREAAA AWLDPRRMARFSPAHLTIDTHEVKVERLDALGIAPDVIKIDVQGFEGQVIAGGIRTIAAHKPVVIVERPSEAVVAALARL GLAAHGWNGRKLVAGDLTRNNAIFLGPQHKALLG
Sequences:
>Translated_274_residues MTNDVAAPGQDSLIRGYRPEALPLRLLRRELRDLQTHFPAIRAAKFDFYNMATRRLGLFADAEIRLLSRLAPVGLALDVG GNWGQSVVALQRYARPQRIVTVEPIPFLAERLRRKYPPGGSVEVLEMGLGLDRGQQLIHVPRYRGYVYDGIASLDREAAA AWLDPRRMARFSPAHLTIDTHEVKVERLDALGIAPDVIKIDVQGFEGQVIAGGIRTIAAHKPVVIVERPSEAVVAALARL GLAAHGWNGRKLVAGDLTRNNAIFLGPQHKALLG >Mature_273_residues TNDVAAPGQDSLIRGYRPEALPLRLLRRELRDLQTHFPAIRAAKFDFYNMATRRLGLFADAEIRLLSRLAPVGLALDVGG NWGQSVVALQRYARPQRIVTVEPIPFLAERLRRKYPPGGSVEVLEMGLGLDRGQQLIHVPRYRGYVYDGIASLDREAAAA WLDPRRMARFSPAHLTIDTHEVKVERLDALGIAPDVIKIDVQGFEGQVIAGGIRTIAAHKPVVIVERPSEAVVAALARLG LAAHGWNGRKLVAGDLTRNNAIFLGPQHKALLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30157; Mature: 30026
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDVAAPGQDSLIRGYRPEALPLRLLRRELRDLQTHFPAIRAAKFDFYNMATRRLGLFA CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC DAEIRLLSRLAPVGLALDVGGNWGQSVVALQRYARPQRIVTVEPIPFLAERLRRKYPPGG CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCC SVEVLEMGLGLDRGQQLIHVPRYRGYVYDGIASLDREAAAAWLDPRRMARFSPAHLTIDT CEEEEEECCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEH HEVKVERLDALGIAPDVIKIDVQGFEGQVIAGGIRTIAAHKPVVIVERPSEAVVAALARL HHEEEEHHHHCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHH GLAAHGWNGRKLVAGDLTRNNAIFLGPQHKALLG HHEECCCCCCEEEEECCCCCCEEEECCCCHHHCC >Mature Secondary Structure TNDVAAPGQDSLIRGYRPEALPLRLLRRELRDLQTHFPAIRAAKFDFYNMATRRLGLFA CCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCC DAEIRLLSRLAPVGLALDVGGNWGQSVVALQRYARPQRIVTVEPIPFLAERLRRKYPPGG CHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCC SVEVLEMGLGLDRGQQLIHVPRYRGYVYDGIASLDREAAAAWLDPRRMARFSPAHLTIDT CEEEEEECCCCCCCCCEEECCCCCCEEHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEH HEVKVERLDALGIAPDVIKIDVQGFEGQVIAGGIRTIAAHKPVVIVERPSEAVVAALARL HHEEEEHHHHCCCCCCEEEEEEECCCCEEEECCHHHHHCCCCEEEEECCCHHHHHHHHHH GLAAHGWNGRKLVAGDLTRNNAIFLGPQHKALLG HHEECCCCCCEEEEECCCCCCEEEECCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA