| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200241
Identifier: 87200241
GI number: 87200241
Start: 2368202
End: 2368486
Strand: Direct
Name: 87200241
Synonym: Saro_2226
Alternate gene names: NA
Gene position: 2368202-2368486 (Clockwise)
Preceding gene: 87200240
Following gene: 87200242
Centisome position: 66.49
GC content: 67.02
Gene sequence:
>285_bases GTGACCACGCCCGAGTCCATTGCCAGCGCCAGGGCCTTGCGCGACGAGGCCCTGGCCGTGTTCCGCGCCGACGTGGAGCT TGCCAGGACCGAAGCCTCGCCCGCCCGCTTCAAGGAACGGGCCGTCGACGAGGCCGTTGAAATGATCGACACCGCTCGCG ACATGGCGAGCGAGAACAAGGCGGTGATCGGAGCAACGGTCGCGGCACTGGCGGCATGGTTCCTCAGGGGACCGATCGCC GACCTTGCAGAGCGAGGTTTCGATTACCTCCGCCGAGGAGACTGA
Upstream 100 bases:
>100_bases GGGGAGCGCTGCTGCTCCTGACGGTTATCTGCCTTGCCAAGGCAGTGAAGCGAATGAACGAGGCCAAGGCGGCGCTCGGC ATCAGGGAGACAACCACGCC
Downstream 100 bases:
>100_bases TATGACTGAAGAAATCGACAACGCAGATCACGCCAGCCTCCGTGACAAGGTTGATGCCGCCAAGACCCGTCTTGCCGAGC GCACCCGGAACGCCCATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MTTPESIASARALRDEALAVFRADVELARTEASPARFKERAVDEAVEMIDTARDMASENKAVIGATVAALAAWFLRGPIA DLAERGFDYLRRGD
Sequences:
>Translated_94_residues MTTPESIASARALRDEALAVFRADVELARTEASPARFKERAVDEAVEMIDTARDMASENKAVIGATVAALAAWFLRGPIA DLAERGFDYLRRGD >Mature_93_residues TTPESIASARALRDEALAVFRADVELARTEASPARFKERAVDEAVEMIDTARDMASENKAVIGATVAALAAWFLRGPIAD LAERGFDYLRRGD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10227; Mature: 10095
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPESIASARALRDEALAVFRADVELARTEASPARFKERAVDEAVEMIDTARDMASENK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC AVIGATVAALAAWFLRGPIADLAERGFDYLRRGD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure TTPESIASARALRDEALAVFRADVELARTEASPARFKERAVDEAVEMIDTARDMASENK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC AVIGATVAALAAWFLRGPIADLAERGFDYLRRGD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA