| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200209
Identifier: 87200209
GI number: 87200209
Start: 2332102
End: 2333055
Strand: Reverse
Name: 87200209
Synonym: Saro_2193
Alternate gene names: NA
Gene position: 2333055-2332102 (Counterclockwise)
Preceding gene: 87200210
Following gene: 87200208
Centisome position: 65.51
GC content: 63.84
Gene sequence:
>954_bases ATGCACACGTCATATGCCGATCAACTCGCCGGGCTCGATCTCGCCGGCTTCTCGATTGGACCCGCTCCCCTATCGACAAG CGATTTCCCGGTCCGCGAAGCGGTCGTCCAAACCCTCGAAGCGGTCTGGTCCGATCTTTTCGCCATGGTGTCCGGGACCG CTCTTGAAGCCGACGCCGAAGATCTTGGCTGGGCCTTCGTCAACATCTTCCACCGCTCGGCGGAACGCAAATCAACGGCC CTCGACAGGGCGACCGACGAGGTCCGCGCGCTGATCGCCACTGCCGACGGATCCGAGGTCCACACCCATGACCTTGAGAC CCAGGTCGAGCGAGCGCAGTGCGCCGAAAGTGCGATGCTGGCGCTCGAAGAGATGCGCGAAGTCGCAGCAGCCCTGTACC TCAATGAGTTTGGTTCCTCCTGGAAGCCGGTCTCCAGTTCGCGCTTCAATCACAGCGCGATGATGACTTCTGCGCTCGTC GAAGGTCGCGATTTCCTGCGTGCCCGTGCCGAGGCCAAACGCCGTGCAGCGGTGCCCGAAGGAACCCCGGTCGTCTTCGC TGGCGGGCGCACCCGTCATGGATGCGAAGAGGATGCACTGACCTTCGGCAACAACGTCTGGGCAACCCTCGACAAGGTCC GCGACCGCGTGCCCGACATGGTGCTCATCCACGGCGGTGATACCAAGGGCGTCGACCGCCTGGCGTCGAGCTGGGCCGAA CGGCGCGGCATCCCACAGGTCACGTTCTCGCTCGATATGCGCTTGGGTGCCCGTGCCGGCTTCAAGCGCAACGAGCGGAT GCTCTCGCTTGATCCGCGTTACGTCATCGCCTTTCCAGGCAATGGCGTGCTCGAACGTCTGGTCATCGAAGCCAAGGCCC GGCGGATCACCGTGGTCGATCGGCGCGGGCCCCTTGGGACCAATCCGAAGAGCACTTCGGCAGCCACTGACTGA
Upstream 100 bases:
>100_bases GACGGGTGCGCAAGCCTGCCTGAAGCTGGCCCTGAAGGGCTCTCGCTGGCGCAGCCATGAACGGGTGCGTCGGCCTCACG CCAGTCAGGAGGACTTCCCT
Downstream 100 bases:
>100_bases GGTCATGCCAGTCCTCGCGCCAGCGCCGGGTCGGCGCTGGCGTCATCCATCAGAGGAAAGGCGCGCGCCTGTGGTTTGGA GCCAGCGAATGGTCGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MHTSYADQLAGLDLAGFSIGPAPLSTSDFPVREAVVQTLEAVWSDLFAMVSGTALEADAEDLGWAFVNIFHRSAERKSTA LDRATDEVRALIATADGSEVHTHDLETQVERAQCAESAMLALEEMREVAAALYLNEFGSSWKPVSSSRFNHSAMMTSALV EGRDFLRARAEAKRRAAVPEGTPVVFAGGRTRHGCEEDALTFGNNVWATLDKVRDRVPDMVLIHGGDTKGVDRLASSWAE RRGIPQVTFSLDMRLGARAGFKRNERMLSLDPRYVIAFPGNGVLERLVIEAKARRITVVDRRGPLGTNPKSTSAATD
Sequences:
>Translated_317_residues MHTSYADQLAGLDLAGFSIGPAPLSTSDFPVREAVVQTLEAVWSDLFAMVSGTALEADAEDLGWAFVNIFHRSAERKSTA LDRATDEVRALIATADGSEVHTHDLETQVERAQCAESAMLALEEMREVAAALYLNEFGSSWKPVSSSRFNHSAMMTSALV EGRDFLRARAEAKRRAAVPEGTPVVFAGGRTRHGCEEDALTFGNNVWATLDKVRDRVPDMVLIHGGDTKGVDRLASSWAE RRGIPQVTFSLDMRLGARAGFKRNERMLSLDPRYVIAFPGNGVLERLVIEAKARRITVVDRRGPLGTNPKSTSAATD >Mature_317_residues MHTSYADQLAGLDLAGFSIGPAPLSTSDFPVREAVVQTLEAVWSDLFAMVSGTALEADAEDLGWAFVNIFHRSAERKSTA LDRATDEVRALIATADGSEVHTHDLETQVERAQCAESAMLALEEMREVAAALYLNEFGSSWKPVSSSRFNHSAMMTSALV EGRDFLRARAEAKRRAAVPEGTPVVFAGGRTRHGCEEDALTFGNNVWATLDKVRDRVPDMVLIHGGDTKGVDRLASSWAE RRGIPQVTFSLDMRLGARAGFKRNERMLSLDPRYVIAFPGNGVLERLVIEAKARRITVVDRRGPLGTNPKSTSAATD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34560; Mature: 34560
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTSYADQLAGLDLAGFSIGPAPLSTSDFPVREAVVQTLEAVWSDLFAMVSGTALEADAE CCCCHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH DLGWAFVNIFHRSAERKSTALDRATDEVRALIATADGSEVHTHDLETQVERAQCAESAML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ALEEMREVAAALYLNEFGSSWKPVSSSRFNHSAMMTSALVEGRDFLRARAEAKRRAAVPE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTPVVFAGGRTRHGCEEDALTFGNNVWATLDKVRDRVPDMVLIHGGDTKGVDRLASSWAE CCEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH RRGIPQVTFSLDMRLGARAGFKRNERMLSLDPRYVIAFPGNGVLERLVIEAKARRITVVD HCCCCEEEEEEECHHCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCEEEEEE RRGPLGTNPKSTSAATD CCCCCCCCCCCCCCCCC >Mature Secondary Structure MHTSYADQLAGLDLAGFSIGPAPLSTSDFPVREAVVQTLEAVWSDLFAMVSGTALEADAE CCCCHHHHHCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH DLGWAFVNIFHRSAERKSTALDRATDEVRALIATADGSEVHTHDLETQVERAQCAESAML HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH ALEEMREVAAALYLNEFGSSWKPVSSSRFNHSAMMTSALVEGRDFLRARAEAKRRAAVPE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GTPVVFAGGRTRHGCEEDALTFGNNVWATLDKVRDRVPDMVLIHGGDTKGVDRLASSWAE CCEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH RRGIPQVTFSLDMRLGARAGFKRNERMLSLDPRYVIAFPGNGVLERLVIEAKARRITVVD HCCCCEEEEEEECHHCCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCEEEEEE RRGPLGTNPKSTSAATD CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA