Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200187

Identifier: 87200187

GI number: 87200187

Start: 2310400

End: 2310762

Strand: Reverse

Name: 87200187

Synonym: Saro_2171

Alternate gene names: NA

Gene position: 2310762-2310400 (Counterclockwise)

Preceding gene: 87200188

Following gene: 87200186

Centisome position: 64.88

GC content: 58.13

Gene sequence:

>363_bases
TTGAGCGTCCCTGGGGCTCTGGCAGGTGAACGGCCATGCGATACCGACCTCAAGGGGAACCGCCTTTGCACGCCGGTTAC
CGCGGAAACATGGGAATATGCCTTTAGCCCAGCAGAGAGTGCATTCTACGAAACGCCGAGTGCATTCATCCTTGATGGGC
GCGCCTATGCATCGATCCTCGATGGGTGGGCCCAATCCGCGAGGATGCACTCACTCATAGCACTGCAGACGCTAGCGGCG
AGTTCGATTGCTGCGATCCAAAGCGCTTTGACCAAATGTTTGCCGACCGTCGCGGACAGTATGACCCGTCCCGGCATCCG
AAGCGAGATGATGCTCTTGCCGGATCAAAACGCCGATACGTGA

Upstream 100 bases:

>100_bases
TTCAGCTTGAGGTATGGAGATTTTCTCGAAGTTGGCGATGGCGACGCTGACTGGGAGCTTTGGACTAAAGTAGTTTCACG
CAGAGATATCGAGACTTTGC

Downstream 100 bases:

>100_bases
CGGCCTAGACCGAATTGGAGGAGAGGCTGCGCACTCACCGCTGCGGGGCATGTTTTACTGGTTACTGTCCTCGTTTCTGC
TATGTTCCAAGGAGCAGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MSVPGALAGERPCDTDLKGNRLCTPVTAETWEYAFSPAESAFYETPSAFILDGRAYASILDGWAQSARMHSLIALQTLAA
SSIAAIQSALTKCLPTVADSMTRPGIRSEMMLLPDQNADT

Sequences:

>Translated_120_residues
MSVPGALAGERPCDTDLKGNRLCTPVTAETWEYAFSPAESAFYETPSAFILDGRAYASILDGWAQSARMHSLIALQTLAA
SSIAAIQSALTKCLPTVADSMTRPGIRSEMMLLPDQNADT
>Mature_119_residues
SVPGALAGERPCDTDLKGNRLCTPVTAETWEYAFSPAESAFYETPSAFILDGRAYASILDGWAQSARMHSLIALQTLAAS
SIAAIQSALTKCLPTVADSMTRPGIRSEMMLLPDQNADT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12799; Mature: 12667

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPGALAGERPCDTDLKGNRLCTPVTAETWEYAFSPAESAFYETPSAFILDGRAYASIL
CCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHCCCCEEEECCHHHHHHH
DGWAQSARMHSLIALQTLAASSIAAIQSALTKCLPTVADSMTRPGIRSEMMLLPDQNADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure 
SVPGALAGERPCDTDLKGNRLCTPVTAETWEYAFSPAESAFYETPSAFILDGRAYASIL
CCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHCCCHHHHHHCCCCEEEECCHHHHHHH
DGWAQSARMHSLIALQTLAASSIAAIQSALTKCLPTVADSMTRPGIRSEMMLLPDQNADT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA