| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200165
Identifier: 87200165
GI number: 87200165
Start: 2291907
End: 2292542
Strand: Direct
Name: 87200165
Synonym: Saro_2149
Alternate gene names: NA
Gene position: 2291907-2292542 (Clockwise)
Preceding gene: 87200160
Following gene: 87200168
Centisome position: 64.35
GC content: 59.43
Gene sequence:
>636_bases GTGCCTTGCGAACCATCGCTTTTGACGAACATAACCGCTGACAAGGGTGCGTTCACCGTCAGCACGAACCTTGACCCAGA GAACATAGACGGACGAATTTGGGTCGATCTCGACCGGAACATCCACGCGAACGGGACGCGCGTCGGCGGGAGTAGCGGCG ATAAGTGCCGCAGGCGCAATTGCGCCGAGATAGAACAGTCGCATGTTGGCAGAATCCTGAGAATGCCAGAATCAGCGTCA GCGTTGCTGGCGCGCGAAGCTGGAAACTCAGGCTGCCGGTGGCTCGGTGAGCGGAGCGAGCGCGATCGAGCGCATCGGCT GAACGACAAGTGGTATGACAACGGCCTTGCCGGTCCAGACCGTCAAGGCAGCGGCGTCTGGATCAGCCGCCAGTGCGATA CCGCAATGGTGATGAACGAGGGCATGGCAGGGCGTGGCGCCCTTTTGCTGTTGCTCGTCCTGATCTTCGCCTTCGGCATG ATCATGCGTGTCGAGGACTTCGATGCCATGCTCACTCAGCAAACTCTCGGCATGAGCAGTCTCGGGCGCGACAAAGCTGC CAAACAAGATGACAAACACCAGCAGCATAGAGATGAGGCGGCCCCGCATGGAACTTCGGCTACCAGTCCTTGCTGA
Upstream 100 bases:
>100_bases GCCACTGCCCGTGTGAATGATACCGATATTTCTCCCATTCCGTTTCCTGACAGGCGACCTGCTGCCCACCCCTCAGAAAC GTAATGTGGAGATCGCCCCT
Downstream 100 bases:
>100_bases AATCGGCAAGTACATGGTCATCGTTTACCGTTCATTCTGGCAAGGAGATCGCGCGGAATTGGCATAGGCAGGAAGGCACT CACATTCGAACGACCGGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPCEPSLLTNITADKGAFTVSTNLDPENIDGRIWVDLDRNIHANGTRVGGSSGDKCRRRNCAEIEQSHVGRILRMPESAS ALLAREAGNSGCRWLGERSERDRAHRLNDKWYDNGLAGPDRQGSGVWISRQCDTAMVMNEGMAGRGALLLLLVLIFAFGM IMRVEDFDAMLTQQTLGMSSLGRDKAAKQDDKHQQHRDEAAPHGTSATSPC
Sequences:
>Translated_211_residues MPCEPSLLTNITADKGAFTVSTNLDPENIDGRIWVDLDRNIHANGTRVGGSSGDKCRRRNCAEIEQSHVGRILRMPESAS ALLAREAGNSGCRWLGERSERDRAHRLNDKWYDNGLAGPDRQGSGVWISRQCDTAMVMNEGMAGRGALLLLLVLIFAFGM IMRVEDFDAMLTQQTLGMSSLGRDKAAKQDDKHQQHRDEAAPHGTSATSPC >Mature_210_residues PCEPSLLTNITADKGAFTVSTNLDPENIDGRIWVDLDRNIHANGTRVGGSSGDKCRRRNCAEIEQSHVGRILRMPESASA LLAREAGNSGCRWLGERSERDRAHRLNDKWYDNGLAGPDRQGSGVWISRQCDTAMVMNEGMAGRGALLLLLVLIFAFGMI MRVEDFDAMLTQQTLGMSSLGRDKAAKQDDKHQQHRDEAAPHGTSATSPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23151; Mature: 23020
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCEPSLLTNITADKGAFTVSTNLDPENIDGRIWVDLDRNIHANGTRVGGSSGDKCRRRN CCCCCCHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCHHHHCC CAEIEQSHVGRILRMPESASALLAREAGNSGCRWLGERSERDRAHRLNDKWYDNGLAGPD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCC RQGSGVWISRQCDTAMVMNEGMAGRGALLLLLVLIFAFGMIMRVEDFDAMLTQQTLGMSS CCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LGRDKAAKQDDKHQQHRDEAAPHGTSATSPC HCCCHHHCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PCEPSLLTNITADKGAFTVSTNLDPENIDGRIWVDLDRNIHANGTRVGGSSGDKCRRRN CCCCCHHHCCCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCCCEECCCCCCHHHHCC CAEIEQSHVGRILRMPESASALLAREAGNSGCRWLGERSERDRAHRLNDKWYDNGLAGPD HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHCCCHHHCCCCCCCC RQGSGVWISRQCDTAMVMNEGMAGRGALLLLLVLIFAFGMIMRVEDFDAMLTQQTLGMSS CCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LGRDKAAKQDDKHQQHRDEAAPHGTSATSPC HCCCHHHCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA