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The map label for this gene is copB [H]

Identifier: 87200151

GI number: 87200151

Start: 2274494

End: 2275549

Strand: Reverse

Name: copB [H]

Synonym: Saro_2135

Alternate gene names: 87200151

Gene position: 2275549-2274494 (Counterclockwise)

Preceding gene: 87200152

Following gene: 87200150

Centisome position: 63.89

GC content: 62.78

Gene sequence:

>1056_bases
ATGAAGGCGACCCTTCTCATCAGCGCTGCTGTCTTGCTGGCAACGCCCGGCTTTGCGGGGGCTCAATCCACCATGCCAGG
CATGGAAATGAAGGATGCGCCCGGCACAGTTGCTCGAGCCGAGGCCCCGCCGGCTGCAATGGACCATTCCGGCCATAGTC
AGCCCGAAGCTGCAGTTCCCGCGCCTGTCGCAGTCGATCCCCATGCCGGACACGCTGCCGAGCCTAAGCCAGCCGGTCCG
CCACGGCCTGAAGCCATCGATCACTCCGGCCATGATATGAATGCCATGGCGGGCATGTCCGAGGGTGATCCGGCTATCGG
AACTGCTCCCGCCCCTGCGCCGCCAGGCGACCATGCCGCGGATACCGTGTTCGATCCCGCTGAGATGGCGCGCGCACGCG
AAGCCCTACGGCGAGAGAATGGAGCCTTCAGCGGGTCGATGGTACTCTTCGATCTCGCCGAATTCCAGGCGCGCAAGGGC
AGGGACGGTTATCGTTGGGCAGGCGAGGCCTGGTTCGGCGGTGACGTCGATCGCCTCCTGATCAAAACAGAGGGCGAGGG
CGCATTCGGCGAGCCGATCGAGGATCTGGAAATCCAGGCACTCTATTCACGTGCCATCTCGCCGTTCTGGAATGCCCATG
TCGGCTTGCGGCACGATATAGTGCCCAATCCCTCGCGGACTTATGCCGTGCTCGGGGTAGAGGGGATCGCGCCTTACTGG
TTCCATTTGACGGGGCAGATGTTCCTCTCCGACAAGGGGGACATCCGGGCTCGCCTTGAGGGAAGCTACGATGAGCGGAT
CACCCAGCGCCTTATCTTCCAGCCTCGAGCGGAACTTAATTTCTCCGCTCAGGACATGCCCGTGATCGGGGTCGGATCAG
GACTCACCGACTTCGAACTGGGTGCGCGCTTGCGCTATGAGATCCGACGCGAGCTCGCGCCCTATGTTGGCGTGGAATGG
AGCCGGAAGGCGGGTGACACCGCGCGTTTGTCACGGCTCGCAGGAGAAGATCCAGATGCGGTCAGTTTTGTCGCTGGCGT
CAGGGTCTGGTTCTGA

Upstream 100 bases:

>100_bases
CCGATGAACTCGGCGACTGGGCATTTCACTGTCACATGCTGCTGCACATGATGTCGGGGATGTTCCGGGTCGTGACCGTG
CGCCATGAGGAGGACGCGGC

Downstream 100 bases:

>100_bases
TTCTGATGGCAATGCACAATGACTTTGGCTGGACCGACGGGTCGCAACGGAGCAGGACTTGATCCTATGAAATCGGTCGT
CGCTTTCATTGTTGCGCTAG

Product: copper resistance B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MKATLLISAAVLLATPGFAGAQSTMPGMEMKDAPGTVARAEAPPAAMDHSGHSQPEAAVPAPVAVDPHAGHAAEPKPAGP
PRPEAIDHSGHDMNAMAGMSEGDPAIGTAPAPAPPGDHAADTVFDPAEMARAREALRRENGAFSGSMVLFDLAEFQARKG
RDGYRWAGEAWFGGDVDRLLIKTEGEGAFGEPIEDLEIQALYSRAISPFWNAHVGLRHDIVPNPSRTYAVLGVEGIAPYW
FHLTGQMFLSDKGDIRARLEGSYDERITQRLIFQPRAELNFSAQDMPVIGVGSGLTDFELGARLRYEIRRELAPYVGVEW
SRKAGDTARLSRLAGEDPDAVSFVAGVRVWF

Sequences:

>Translated_351_residues
MKATLLISAAVLLATPGFAGAQSTMPGMEMKDAPGTVARAEAPPAAMDHSGHSQPEAAVPAPVAVDPHAGHAAEPKPAGP
PRPEAIDHSGHDMNAMAGMSEGDPAIGTAPAPAPPGDHAADTVFDPAEMARAREALRRENGAFSGSMVLFDLAEFQARKG
RDGYRWAGEAWFGGDVDRLLIKTEGEGAFGEPIEDLEIQALYSRAISPFWNAHVGLRHDIVPNPSRTYAVLGVEGIAPYW
FHLTGQMFLSDKGDIRARLEGSYDERITQRLIFQPRAELNFSAQDMPVIGVGSGLTDFELGARLRYEIRRELAPYVGVEW
SRKAGDTARLSRLAGEDPDAVSFVAGVRVWF
>Mature_351_residues
MKATLLISAAVLLATPGFAGAQSTMPGMEMKDAPGTVARAEAPPAAMDHSGHSQPEAAVPAPVAVDPHAGHAAEPKPAGP
PRPEAIDHSGHDMNAMAGMSEGDPAIGTAPAPAPPGDHAADTVFDPAEMARAREALRRENGAFSGSMVLFDLAEFQARKG
RDGYRWAGEAWFGGDVDRLLIKTEGEGAFGEPIEDLEIQALYSRAISPFWNAHVGLRHDIVPNPSRTYAVLGVEGIAPYW
FHLTGQMFLSDKGDIRARLEGSYDERITQRLIFQPRAELNFSAQDMPVIGVGSGLTDFELGARLRYEIRRELAPYVGVEW
SRKAGDTARLSRLAGEDPDAVSFVAGVRVWF

Specific function: Exact function not known. Possibly mediates copper resistance by its sequestration in the outer membrane [H]

COG id: COG3667

COG function: function code P; Uncharacterized protein involved in copper resistance

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007939 [H]

Pfam domain/function: PF05275 CopB [H]

EC number: NA

Molecular weight: Translated: 37632; Mature: 37632

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKATLLISAAVLLATPGFAGAQSTMPGMEMKDAPGTVARAEAPPAAMDHSGHSQPEAAVP
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
APVAVDPHAGHAAEPKPAGPPRPEAIDHSGHDMNAMAGMSEGDPAIGTAPAPAPPGDHAA
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
DTVFDPAEMARAREALRRENGAFSGSMVLFDLAEFQARKGRDGYRWAGEAWFGGDVDRLL
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCEECCCCCCCCCCEEEE
IKTEGEGAFGEPIEDLEIQALYSRAISPFWNAHVGLRHDIVPNPSRTYAVLGVEGIAPYW
EEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCCEEEEEEECCCCCEE
FHLTGQMFLSDKGDIRARLEGSYDERITQRLIFQPRAELNFSAQDMPVIGVGSGLTDFEL
EEEECEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH
GARLRYEIRRELAPYVGVEWSRKAGDTARLSRLAGEDPDAVSFVAGVRVWF
HHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHEECC
>Mature Secondary Structure
MKATLLISAAVLLATPGFAGAQSTMPGMEMKDAPGTVARAEAPPAAMDHSGHSQPEAAVP
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCC
APVAVDPHAGHAAEPKPAGPPRPEAIDHSGHDMNAMAGMSEGDPAIGTAPAPAPPGDHAA
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
DTVFDPAEMARAREALRRENGAFSGSMVLFDLAEFQARKGRDGYRWAGEAWFGGDVDRLL
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCCCCEECCCCCCCCCCEEEE
IKTEGEGAFGEPIEDLEIQALYSRAISPFWNAHVGLRHDIVPNPSRTYAVLGVEGIAPYW
EEECCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCCEEECCCCCCCCEEEEEEECCCCCEE
FHLTGQMFLSDKGDIRARLEGSYDERITQRLIFQPRAELNFSAQDMPVIGVGSGLTDFEL
EEEECEEEECCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHH
GARLRYEIRRELAPYVGVEWSRKAGDTARLSRLAGEDPDAVSFVAGVRVWF
HHHHHHHHHHHHCHHCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3372485; 1924351 [H]