| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is hisI [H]
Identifier: 87200123
GI number: 87200123
Start: 2243640
End: 2243975
Strand: Reverse
Name: hisI [H]
Synonym: Saro_2107
Alternate gene names: 87200123
Gene position: 2243975-2243640 (Counterclockwise)
Preceding gene: 87200124
Following gene: 87200122
Centisome position: 63.0
GC content: 64.29
Gene sequence:
>336_bases ATGCCGAAGTTCGATGCCAATGGCCTCGTCACCGCCGTCGCGGTCGACCATGCCACCGGTGCGCTGCTGATGCTTGCCCA CATGGATGCGCAAGCCATCGCCAAAACGCGCGAGACCGGCTTTGCCCATTTCCATTCCCGCTCGCGCGGGCGCCTGTGGA TGAAGGGGGAAAGCTCCGGCCACGTGCTGAGGATCGTCGAGATCCGCGTCGATTGCGACCAGGATGCGCTCGAACTGCGC GTCGAGGCGGCAGGCCCTGCGTGCCATACTCTTGCGCCGACGTGCTTCTACCGCCGTCTTGACCATCGCGGCCAACTCGA ACGCATCGTCGATTGA
Upstream 100 bases:
>100_bases TTATCCTGCAACAATTCCGCAATCCCCATGCGGGATCGAAAGGTTGCGTTCCTTGGACAGAGTTACTGAAACCGCCCGCC GCGAGCAGGGCACCGAATTC
Downstream 100 bases:
>100_bases CGCTTACGTAAGGGGCAGGTAGCAAGATCGGCATGTCACAGTACGATGCCGCCACGACTCACGACCACACCGGGCACCTC GATCAGCCTGACGCGCTGAA
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH [H]
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MPKFDANGLVTAVAVDHATGALLMLAHMDAQAIAKTRETGFAHFHSRSRGRLWMKGESSGHVLRIVEIRVDCDQDALELR VEAAGPACHTLAPTCFYRRLDHRGQLERIVD
Sequences:
>Translated_111_residues MPKFDANGLVTAVAVDHATGALLMLAHMDAQAIAKTRETGFAHFHSRSRGRLWMKGESSGHVLRIVEIRVDCDQDALELR VEAAGPACHTLAPTCFYRRLDHRGQLERIVD >Mature_110_residues PKFDANGLVTAVAVDHATGALLMLAHMDAQAIAKTRETGFAHFHSRSRGRLWMKGESSGHVLRIVEIRVDCDQDALELRV EAAGPACHTLAPTCFYRRLDHRGQLERIVD
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family [H]
Homologues:
Organism=Escherichia coli, GI2367128, Length=91, Percent_Identity=40.6593406593407, Blast_Score=85, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6319819, Length=91, Percent_Identity=37.3626373626374, Blast_Score=64, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002496 - ProDom: PD002610 [H]
Pfam domain/function: PF01502 PRA-CH [H]
EC number: =3.5.4.19 [H]
Molecular weight: Translated: 12306; Mature: 12175
Theoretical pI: Translated: 7.64; Mature: 7.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKFDANGLVTAVAVDHATGALLMLAHMDAQAIAKTRETGFAHFHSRSRGRLWMKGESSG CCCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCC HVLRIVEIRVDCDQDALELRVEAAGPACHTLAPTCFYRRLDHRGQLERIVD CEEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCC >Mature Secondary Structure PKFDANGLVTAVAVDHATGALLMLAHMDAQAIAKTRETGFAHFHSRSRGRLWMKGESSG CCCCCCCEEEEEEECCCCCEEEEEECCCHHHHHHHHHCCCCEECCCCCCEEEEECCCCC HVLRIVEIRVDCDQDALELRVEAAGPACHTLAPTCFYRRLDHRGQLERIVD CEEEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA