Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 87200121

GI number: 87200121

Start: 2241329

End: 2243131

Strand: Reverse

Name: mmgC [H]

Synonym: Saro_2105

Alternate gene names: 87200121

Gene position: 2243131-2241329 (Counterclockwise)

Preceding gene: 87200122

Following gene: 87200115

Centisome position: 62.98

GC content: 66.5

Gene sequence:

>1803_bases
ATGCCCGTCTACAACGCCCCCACGCGCGACACGCGCTTCGTCGTCAATGAACTGCTCCGTCTCGAATCGTTCGGCAACCT
GCCCGGCTTCGAAAGCGCGACGCAGGACATGACCGACGCGATCATCGAGGAAGCCGGCCGCTTCGTCTCCGAAGTGATCG
CACCGCTGAACCTGCCGGGCGACCGCGAGGGCTGCACTCGCCATCCCGACGGCAGCGTGACCACGCCCGCGGGCTTCAAG
GACGCCTACCGCCAGTACGTCGAGGGTGGATGGGGCACGCTCTCCGCGCCCGAGGAGTTCGGCGGGCAGGGGCTGCCGCA
CGTGATGGGCTTCATCATGGAGAAGTACCTCGCCACCGCCAACCAGGCCTTCGCGATGTACCCCGGCCTTGCCAACGGCG
CGATCTCCGCGATCCGCGCCAAGGGCTCGCCCGAACAGCAGGCGAAGTACCTGCCGAGGATGGTGACCGGCGAATGGCTC
GGCACGATGAACCTCACCGAGCCGCACTGCGGCACCGACCTCGGCATGATCCGTACCCGGGCGGAGCCCCAGGTCGACGG
TTCCTATGCGATCACCGGTACCAAGATCTTCATCTCGGCGGGCGACCATGACCTGACCGAAAACATTATCCACCTCGTCC
TCGCCAAGACGCCCGGCGCGCCCGAATCGAGCAAGGGCATCTCGCTGTTCATCGTGCCCAAGTTCATCGTCAACGATGAC
GGCTCGCTGGGCGAGAGGAACGCTGTCTCCGTCGGCGCCATCGAGGAGAAGATGGGCATCCACGGCAACGCCACCTGCGT
GATGAACTACGACGGGGCCAAGGGCTGGATGGTCGGCGAGGAGAACAAGGGCCTCGCCGCGATGTTCATCATGATGAACG
CGGCGCGCCTTGGCGTCGGCATGCAGGGGCTCGCCCAGGCGGAAGTGGCCTACCAGAACGGTCTCGCCTACGCGCTCGAC
CGCCGCCAGGGCCGCGCGCTCACCGGTCCGGCCGATCCGCAGGCCAAGGCCGACCCGATCATCGTCCATCCCGACGTGCG
CCGCATGTTGATGGACGGCAAGACCTTCGTTGAAGGCATGCGCGCGCTGTGCCTGTGGGGTGCGCTCCAGGTCGACCTTT
CGCACAAGGCCGCGACCGAGGAAGAGCGCCAGGAAGCCGATGACCTAATCAGCCTGCTGACCCCGGTGATCAAGGGCTAC
GGCACCGACATGGGCTACAAGGTCGCCACCGACATGCAGCAGGTCTGGGGCGGTCACGGCTACATCGCCGAGAACGGCAT
GGAGCAATTCGTCCGCGATGCCCGCATCGCGATGATCTACGAGGGCACCAACGGCGTCCAGGCGATGGACCTTGCCGGCC
GCAAGCTGGCGCTCAACGGCGGCCGCGCGGTGCAGCGTTTCTTCGCGCTCGTCGATGGGGAGTGCGCCGAGGAGACCGCC
GACGAGACGGTGAAGCTCGTTGCCGAGCGCCTGTCCAAGGCCACCGGCGAGATGAAGGCCGCGACGATGTGGTTCATGCA
GAACGCCATGGCCAACCCCAACAATCTTGGCGCGGGCGCCTATGCCTACATGACGCTGACCGGCATCGTCTCGCTCGGCC
TGATGTGGCTGCGCATGGCCAAGGTCGCCGCCGCGGCCATTGCCGATGGGGCAGAGGACAAGGCGTTCTACGAAGCCAAG
CTGACTTGCGCACGCCACTGGGCTACCCGCTACACCACCGAAGCGGGCGCCCTGCGCCGCCAGGTCGAGGCGGGCAGCGA
CACGATCATGGCGCTGACGCCGGAGCAACTTGCCATCGCGTGA

Upstream 100 bases:

>100_bases
CCGCGACGATCGAGGAACTCACCAGCTTCGTCGAACTCGTCGTCCAGAAGGAGCGGTCCGAAGGCCGCGATCCGGACACA
TACAGCAAGGGATAGGACCG

Downstream 100 bases:

>100_bases
TGCGGTGATCTGGTAAATCGGCTCGCATGACGGGCTGCGCGCTGCTGATGCCTGATCCCCCTATCCGGGGGTGAGATGCA
TTGACCAGACGCAGCCCGAA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MPVYNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPGDREGCTRHPDGSVTTPAGFK
DAYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATANQAFAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWL
GTMNLTEPHCGTDLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIVPKFIVNDD
GSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMMNAARLGVGMQGLAQAEVAYQNGLAYALD
RRQGRALTGPADPQAKADPIIVHPDVRRMLMDGKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGY
GTDMGYKVATDMQQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFALVDGECAEETA
DETVKLVAERLSKATGEMKAATMWFMQNAMANPNNLGAGAYAYMTLTGIVSLGLMWLRMAKVAAAAIADGAEDKAFYEAK
LTCARHWATRYTTEAGALRRQVEAGSDTIMALTPEQLAIA

Sequences:

>Translated_600_residues
MPVYNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPGDREGCTRHPDGSVTTPAGFK
DAYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATANQAFAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWL
GTMNLTEPHCGTDLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIVPKFIVNDD
GSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMMNAARLGVGMQGLAQAEVAYQNGLAYALD
RRQGRALTGPADPQAKADPIIVHPDVRRMLMDGKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGY
GTDMGYKVATDMQQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFALVDGECAEETA
DETVKLVAERLSKATGEMKAATMWFMQNAMANPNNLGAGAYAYMTLTGIVSLGLMWLRMAKVAAAAIADGAEDKAFYEAK
LTCARHWATRYTTEAGALRRQVEAGSDTIMALTPEQLAIA
>Mature_599_residues
PVYNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPGDREGCTRHPDGSVTTPAGFKD
AYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATANQAFAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLG
TMNLTEPHCGTDLGMIRTRAEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIVPKFIVNDDG
SLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMMNAARLGVGMQGLAQAEVAYQNGLAYALDR
RQGRALTGPADPQAKADPIIVHPDVRRMLMDGKTFVEGMRALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYG
TDMGYKVATDMQQVWGGHGYIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFALVDGECAEETAD
ETVKLVAERLSKATGEMKAATMWFMQNAMANPNNLGAGAYAYMTLTGIVSLGLMWLRMAKVAAAAIADGAEDKAFYEAKL
TCARHWATRYTTEAGALRRQVEAGSDTIMALTPEQLAIA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI7656849, Length=370, Percent_Identity=27.027027027027, Blast_Score=102, Evalue=9e-22,
Organism=Homo sapiens, GI21361497, Length=412, Percent_Identity=25.7281553398058, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958412, Length=410, Percent_Identity=24.390243902439, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI226958414, Length=363, Percent_Identity=25.3443526170799, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI4501857, Length=351, Percent_Identity=25.9259259259259, Blast_Score=98, Evalue=3e-20,
Organism=Homo sapiens, GI4557233, Length=374, Percent_Identity=26.4705882352941, Blast_Score=97, Evalue=6e-20,
Organism=Homo sapiens, GI4557235, Length=434, Percent_Identity=27.4193548387097, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI76496475, Length=434, Percent_Identity=27.4193548387097, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI4501859, Length=426, Percent_Identity=23.4741784037559, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI187960098, Length=418, Percent_Identity=25.1196172248804, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI4557231, Length=418, Percent_Identity=25.1196172248804, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI87082384, Length=338, Percent_Identity=26.9230769230769, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI87081958, Length=413, Percent_Identity=26.1501210653753, Blast_Score=69, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17508101, Length=442, Percent_Identity=25.5656108597285, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=370, Percent_Identity=25.6756756756757, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17569725, Length=357, Percent_Identity=26.3305322128852, Blast_Score=96, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17533517, Length=440, Percent_Identity=23.6363636363636, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17534899, Length=369, Percent_Identity=26.5582655826558, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=380, Percent_Identity=27.3684210526316, Blast_Score=92, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=368, Percent_Identity=26.9021739130435, Blast_Score=91, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI32563615, Length=236, Percent_Identity=28.3898305084746, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71990804, Length=240, Percent_Identity=28.75, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=22.4867724867725, Blast_Score=80, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI86563383, Length=350, Percent_Identity=24, Blast_Score=76, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI86563381, Length=350, Percent_Identity=24, Blast_Score=76, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=224, Percent_Identity=30.8035714285714, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355753, Length=378, Percent_Identity=28.042328042328, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI21356377, Length=380, Percent_Identity=27.8947368421053, Blast_Score=105, Evalue=7e-23,
Organism=Drosophila melanogaster, GI281363737, Length=447, Percent_Identity=25.9507829977629, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24666513, Length=374, Percent_Identity=25.668449197861, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24646207, Length=391, Percent_Identity=26.0869565217391, Blast_Score=96, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24660351, Length=317, Percent_Identity=26.813880126183, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19920834, Length=347, Percent_Identity=26.2247838616715, Blast_Score=73, Evalue=5e-13,
Organism=Drosophila melanogaster, GI221473076, Length=369, Percent_Identity=23.8482384823848, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI45550141, Length=368, Percent_Identity=23.9130434782609, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64623; Mature: 64491

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVYNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPG
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DREGCTRHPDGSVTTPAGFKDAYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATA
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
NQAFAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLGTMNLTEPHCGTDLGMIRTR
CCHHEECCCCCCCHHHHHCCCCCHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHCCC
AEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIVPKFIVNDD
CCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCC
GSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMMNAARLGVG
CCCCCCCCEEECCHHHHHCCCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
MQGLAQAEVAYQNGLAYALDRRQGRALTGPADPQAKADPIIVHPDVRRMLMDGKTFVEGM
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHH
RALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYGTDMGYKVATDMQQVWGGHG
HHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
YIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFALVDGECAEETA
EEHHHHHHHHHHCCEEEEEEECCCCCEEHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHH
DETVKLVAERLSKATGEMKAATMWFMQNAMANPNNLGAGAYAYMTLTGIVSLGLMWLRMA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVAAAAIADGAEDKAFYEAKLTCARHWATRYTTEAGALRRQVEAGSDTIMALTPEQLAIA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHCCC
>Mature Secondary Structure 
PVYNAPTRDTRFVVNELLRLESFGNLPGFESATQDMTDAIIEEAGRFVSEVIAPLNLPG
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
DREGCTRHPDGSVTTPAGFKDAYRQYVEGGWGTLSAPEEFGGQGLPHVMGFIMEKYLATA
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHH
NQAFAMYPGLANGAISAIRAKGSPEQQAKYLPRMVTGEWLGTMNLTEPHCGTDLGMIRTR
CCHHEECCCCCCCHHHHHCCCCCHHHHHHHCCHHHCCCHHCCCCCCCCCCCCCHHHHCCC
AEPQVDGSYAITGTKIFISAGDHDLTENIIHLVLAKTPGAPESSKGISLFIVPKFIVNDD
CCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCC
GSLGERNAVSVGAIEEKMGIHGNATCVMNYDGAKGWMVGEENKGLAAMFIMMNAARLGVG
CCCCCCCCEEECCHHHHHCCCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHHHHCCC
MQGLAQAEVAYQNGLAYALDRRQGRALTGPADPQAKADPIIVHPDVRRMLMDGKTFVEGM
HHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECHHHHHHHHCCHHHHHHH
RALCLWGALQVDLSHKAATEEERQEADDLISLLTPVIKGYGTDMGYKVATDMQQVWGGHG
HHHHHHHHHEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC
YIAENGMEQFVRDARIAMIYEGTNGVQAMDLAGRKLALNGGRAVQRFFALVDGECAEETA
EEHHHHHHHHHHCCEEEEEEECCCCCEEHCCCCCEEEECCCHHHHHHHHHHCCCHHHHHH
DETVKLVAERLSKATGEMKAATMWFMQNAMANPNNLGAGAYAYMTLTGIVSLGLMWLRMA
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KVAAAAIADGAEDKAFYEAKLTCARHWATRYTTEAGALRRQVEAGSDTIMALTPEQLAIA
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]