| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is accC [H]
Identifier: 87200095
GI number: 87200095
Start: 2217156
End: 2218502
Strand: Direct
Name: accC [H]
Synonym: Saro_2079
Alternate gene names: 87200095
Gene position: 2217156-2218502 (Clockwise)
Preceding gene: 87200094
Following gene: 87200098
Centisome position: 62.25
GC content: 64.51
Gene sequence:
>1347_bases ATGGCCATCAAGCGCCTGCTGATCGCCAATCGCGGCGAGATCGCGCTGCGCATCCATCGCGCGGCTCACGAAATGGGCAT CGAGACGGTCGCGGTGCACTCCACCGCCGATGCCGATGCGATGCACGTGCGCCTTGCCGACCATGCGGTCTGCATCGGCC CGCCCGCCGCGAAGGACAGCTATCTCAACGTCGCCGCGATCATCTCGGCTGCCGAGATCACCCATGCCGACGCGATCCAT CCGGGCTACGGCTTCCTTTCGGAAAACGCCAAGTTCGCGGAAATCGTCGAAGCGCACGGTATCACCTGGGTCGGTCCCAA GCCAGAACACATCCGCACGATGGGCGACAAGGTCGAGGCCAAGCGCACCGCGGGCGCGCTCGGCCTGCCGCTGGTCCCCG GTTCCGACGGCGCGGTGTCCGAAATCGACGAGGCCAAGAAGATCGCCGATGCCATCGGCTATCCGGTGATCATCAAGGCA GCCTCGGGCGGCGGCGGTCGCGGCATGAAGGTTTGCAACAGCGCCGACCAGCTCGAAACGCTGATGCAGCAAGCCGGCAG CGAGGCGAAGGCCGCGTTCGGCGATGCCACCGTCTATATCGAGAAGTATCTCGGCAACCCGCGCCACATCGAATTCCAGA TCTTCGGTGACGGCAACGGCAACGCGATCCACCTGGGCGAGCGCGACTGCTCGCTCCAGCGCCGCCACCAGAAGGTGCTC GAGGAAGCGCCCTCGCCCGTCATCTCGGCCGACGAACGTGCGCGCATGGGCGGCATCGTCGCCAAGGCCATGGCCGACAT GGGGTATCGCGGCGCGGGCACGATCGAGTTCCTGTGGGAGAACGGCGAGTTCTACTTCATCGAGATGAACACCCGCCTTC AGGTGGAACATCCGGTGACCGAGGCGATCACCGGCGTCGACCTGGTGCGCGAACAGATCCGCATTGCCGATGGCAAGCCG CTTTCGGTCACGCAGGACGAGATCGAGTTCAAGGGACACGCGATCGAGTGCCGCATCAATGCGGAAGACCCGTTCACATT TGCCCCCTCGCCGGGACTGGTGAAGAGCTATCACGCAGCGGGCGGCATGCACGTGCGCGTCGATTCAGGTCTCTACGCCG GGTACAAGATCCCGCCGTACTATGACTCGATGATTGCCAAGCTGATCGTCTACGGCCGGACCCGCGAAGGCTGCATCATG CGGCTGAAGCGCGCGCTCGAGGAAATGGTGATCGAAGGCCCCAAGACCTCGATCCCGCTCCACCAGCGCCTGCTGAGCCA GCCCGACTTCCTCAGCGGCGACTACACGATCAAGTGGCTCGAGGAATGGCTGGCCAAGGACGCCTGA
Upstream 100 bases:
>100_bases CGCGCCGGCTGCCGGCGTCGTGAAGGCCATCCTCGTCGAGAACGCGCAGCCGGTCGAATTCGACCAGCCGCTGGTCGTGA TCGCGTAAGGCGCTAGCGAA
Downstream 100 bases:
>100_bases GGCCCACGCCACGGGCCCGCGCCACGGCAAAGAATCAAGCCCCTGCCTCGGCGGGGGCTTTTTTCGTTCAGCCTCTGGGC TTCCATACGATGACGCGCCA
Product: biotin carboxylase / acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha
Products: NA
Alternate protein names: Acetyl-CoA carboxylase subunit A; ACC [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MAIKRLLIANRGEIALRIHRAAHEMGIETVAVHSTADADAMHVRLADHAVCIGPPAAKDSYLNVAAIISAAEITHADAIH PGYGFLSENAKFAEIVEAHGITWVGPKPEHIRTMGDKVEAKRTAGALGLPLVPGSDGAVSEIDEAKKIADAIGYPVIIKA ASGGGGRGMKVCNSADQLETLMQQAGSEAKAAFGDATVYIEKYLGNPRHIEFQIFGDGNGNAIHLGERDCSLQRRHQKVL EEAPSPVISADERARMGGIVAKAMADMGYRGAGTIEFLWENGEFYFIEMNTRLQVEHPVTEAITGVDLVREQIRIADGKP LSVTQDEIEFKGHAIECRINAEDPFTFAPSPGLVKSYHAAGGMHVRVDSGLYAGYKIPPYYDSMIAKLIVYGRTREGCIM RLKRALEEMVIEGPKTSIPLHQRLLSQPDFLSGDYTIKWLEEWLAKDA
Sequences:
>Translated_448_residues MAIKRLLIANRGEIALRIHRAAHEMGIETVAVHSTADADAMHVRLADHAVCIGPPAAKDSYLNVAAIISAAEITHADAIH PGYGFLSENAKFAEIVEAHGITWVGPKPEHIRTMGDKVEAKRTAGALGLPLVPGSDGAVSEIDEAKKIADAIGYPVIIKA ASGGGGRGMKVCNSADQLETLMQQAGSEAKAAFGDATVYIEKYLGNPRHIEFQIFGDGNGNAIHLGERDCSLQRRHQKVL EEAPSPVISADERARMGGIVAKAMADMGYRGAGTIEFLWENGEFYFIEMNTRLQVEHPVTEAITGVDLVREQIRIADGKP LSVTQDEIEFKGHAIECRINAEDPFTFAPSPGLVKSYHAAGGMHVRVDSGLYAGYKIPPYYDSMIAKLIVYGRTREGCIM RLKRALEEMVIEGPKTSIPLHQRLLSQPDFLSGDYTIKWLEEWLAKDA >Mature_447_residues AIKRLLIANRGEIALRIHRAAHEMGIETVAVHSTADADAMHVRLADHAVCIGPPAAKDSYLNVAAIISAAEITHADAIHP GYGFLSENAKFAEIVEAHGITWVGPKPEHIRTMGDKVEAKRTAGALGLPLVPGSDGAVSEIDEAKKIADAIGYPVIIKAA SGGGGRGMKVCNSADQLETLMQQAGSEAKAAFGDATVYIEKYLGNPRHIEFQIFGDGNGNAIHLGERDCSLQRRHQKVLE EAPSPVISADERARMGGIVAKAMADMGYRGAGTIEFLWENGEFYFIEMNTRLQVEHPVTEAITGVDLVREQIRIADGKPL SVTQDEIEFKGHAIECRINAEDPFTFAPSPGLVKSYHAAGGMHVRVDSGLYAGYKIPPYYDSMIAKLIVYGRTREGCIMR LKRALEEMVIEGPKTSIPLHQRLLSQPDFLSGDYTIKWLEEWLAKDA
Specific function: This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA [H]
COG id: COG0439
COG function: function code I; Biotin carboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotin carboxylation domain [H]
Homologues:
Organism=Homo sapiens, GI65506442, Length=445, Percent_Identity=47.6404494382022, Blast_Score=400, Evalue=1e-112, Organism=Homo sapiens, GI189095269, Length=445, Percent_Identity=47.6404494382022, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI295821183, Length=445, Percent_Identity=47.6404494382022, Blast_Score=400, Evalue=1e-111, Organism=Homo sapiens, GI116805327, Length=435, Percent_Identity=45.9770114942529, Blast_Score=391, Evalue=1e-109, Organism=Homo sapiens, GI106049528, Length=447, Percent_Identity=45.1901565995526, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI106049295, Length=447, Percent_Identity=45.1901565995526, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI106049292, Length=447, Percent_Identity=45.1901565995526, Blast_Score=380, Evalue=1e-105, Organism=Homo sapiens, GI38679977, Length=507, Percent_Identity=31.3609467455621, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI38679967, Length=507, Percent_Identity=31.3609467455621, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI38679960, Length=507, Percent_Identity=31.3609467455621, Blast_Score=237, Evalue=1e-62, Organism=Homo sapiens, GI38679974, Length=507, Percent_Identity=31.3609467455621, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI38679971, Length=507, Percent_Identity=31.3609467455621, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI134142062, Length=508, Percent_Identity=31.496062992126, Blast_Score=232, Evalue=5e-61, Organism=Escherichia coli, GI1789654, Length=443, Percent_Identity=60.2708803611738, Blast_Score=524, Evalue=1e-150, Organism=Escherichia coli, GI1786216, Length=244, Percent_Identity=25.4098360655738, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17567343, Length=445, Percent_Identity=45.8426966292135, Blast_Score=391, Evalue=1e-109, Organism=Caenorhabditis elegans, GI71987519, Length=436, Percent_Identity=47.0183486238532, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17562816, Length=449, Percent_Identity=43.652561247216, Blast_Score=363, Evalue=1e-100, Organism=Caenorhabditis elegans, GI133931226, Length=492, Percent_Identity=30.8943089430894, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI71997168, Length=509, Percent_Identity=26.3261296660118, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI71997163, Length=509, Percent_Identity=26.3261296660118, Blast_Score=192, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6319695, Length=448, Percent_Identity=45.7589285714286, Blast_Score=363, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6321376, Length=448, Percent_Identity=46.2053571428571, Blast_Score=357, Evalue=2e-99, Organism=Saccharomyces cerevisiae, GI6319685, Length=430, Percent_Identity=43.0232558139535, Blast_Score=344, Evalue=1e-95, Organism=Saccharomyces cerevisiae, GI6323863, Length=467, Percent_Identity=31.0492505353319, Blast_Score=222, Evalue=1e-58, Organism=Saccharomyces cerevisiae, GI6324343, Length=513, Percent_Identity=29.8245614035088, Blast_Score=221, Evalue=2e-58, Organism=Drosophila melanogaster, GI281363050, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652224, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652222, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652220, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652218, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652212, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652210, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652214, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI19921944, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24652216, Length=449, Percent_Identity=46.5478841870824, Blast_Score=379, Evalue=1e-105, Organism=Drosophila melanogaster, GI24651757, Length=446, Percent_Identity=43.9461883408072, Blast_Score=372, Evalue=1e-103, Organism=Drosophila melanogaster, GI24651759, Length=408, Percent_Identity=43.3823529411765, Blast_Score=335, Evalue=5e-92, Organism=Drosophila melanogaster, GI24586458, Length=501, Percent_Identity=30.7385229540918, Blast_Score=222, Evalue=3e-58, Organism=Drosophila melanogaster, GI161076409, Length=501, Percent_Identity=30.7385229540918, Blast_Score=222, Evalue=5e-58, Organism=Drosophila melanogaster, GI161076407, Length=501, Percent_Identity=30.7385229540918, Blast_Score=221, Evalue=6e-58, Organism=Drosophila melanogaster, GI24586460, Length=501, Percent_Identity=30.7385229540918, Blast_Score=221, Evalue=6e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004549 - InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14; =6.4.1.2 [H]
Molecular weight: Translated: 48701; Mature: 48570
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIKRLLIANRGEIALRIHRAAHEMGIETVAVHSTADADAMHVRLADHAVCIGPPAAKDS CCCCEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCCCCEEEEEEECCEEEECCCCCCCC YLNVAAIISAAEITHADAIHPGYGFLSENAKFAEIVEAHGITWVGPKPEHIRTMGDKVEA CEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHH KRTAGALGLPLVPGSDGAVSEIDEAKKIADAIGYPVIIKAASGGGGRGMKVCNSADQLET HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCHHHHHH LMQQAGSEAKAAFGDATVYIEKYLGNPRHIEFQIFGDGNGNAIHLGERDCSLQRRHQKVL HHHHCCCHHHHHCCCCEEEEEHHCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHH EEAPSPVISADERARMGGIVAKAMADMGYRGAGTIEFLWENGEFYFIEMNTRLQVEHPVT HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH EAITGVDLVREQIRIADGKPLSVTQDEIEFKGHAIECRINAEDPFTFAPSPGLVKSYHAA HHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCEEEEEEECCCCCEEECCCCCHHHHHHCC GGMHVRVDSGLYAGYKIPPYYDSMIAKLIVYGRTREGCIMRLKRALEEMVIEGPKTSIPL CCEEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCH HQRLLSQPDFLSGDYTIKWLEEWLAKDA HHHHCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AIKRLLIANRGEIALRIHRAAHEMGIETVAVHSTADADAMHVRLADHAVCIGPPAAKDS CCCEEEECCCCCEEEEEEHHHHHCCCEEEEEECCCCCCEEEEEEECCEEEECCCCCCCC YLNVAAIISAAEITHADAIHPGYGFLSENAKFAEIVEAHGITWVGPKPEHIRTMGDKVEA CEEHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHH KRTAGALGLPLVPGSDGAVSEIDEAKKIADAIGYPVIIKAASGGGGRGMKVCNSADQLET HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCHHHHHH LMQQAGSEAKAAFGDATVYIEKYLGNPRHIEFQIFGDGNGNAIHLGERDCSLQRRHQKVL HHHHCCCHHHHHCCCCEEEEEHHCCCCEEEEEEEEECCCCCEEEECCCCHHHHHHHHHHH EEAPSPVISADERARMGGIVAKAMADMGYRGAGTIEFLWENGEFYFIEMNTRLQVEHPVT HHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEECCEEEECCCHH EAITGVDLVREQIRIADGKPLSVTQDEIEFKGHAIECRINAEDPFTFAPSPGLVKSYHAA HHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCEEEEEEECCCCCEEECCCCCHHHHHHCC GGMHVRVDSGLYAGYKIPPYYDSMIAKLIVYGRTREGCIMRLKRALEEMVIEGPKTSIPL CCEEEEECCCEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCH HQRLLSQPDFLSGDYTIKWLEEWLAKDA HHHHCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]