| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200073
Identifier: 87200073
GI number: 87200073
Start: 2198561
End: 2198818
Strand: Reverse
Name: 87200073
Synonym: Saro_2057
Alternate gene names: NA
Gene position: 2198818-2198561 (Counterclockwise)
Preceding gene: 87200075
Following gene: 87200070
Centisome position: 61.74
GC content: 70.16
Gene sequence:
>258_bases ATGCGCAAGTTCATCATTGCATCGCTCATCCTCGGCTCGGCGGCGACGCTGGGCGGCTGTGCGCGCAACTATGCGGCTGA AGGAACCGCGGTTGGCGCCGCAGCCGGCGCTGGCGTCGCGGCGGCGACGGGCGGCGACATCGCCACAGGTGCCGCGATCG GCGGGGCCGTCGGCGCGGTCGGCGGATCGCAGATCAAGAAGGATAACGACCGCTGCTGGCGCTACGACCGCAACGGCGAC CGTTACTGGGCCTGCTGA
Upstream 100 bases:
>100_bases GGCATTTCGGCAGGAGAAACGTGCGGGCGCACCGCTTCGCCGCAGGACCGGGAACCGTCCGCCGCCGAGGTCGTCCTTCC CGTGAAAATGGAGAAAGACC
Downstream 100 bases:
>100_bases GCAGGCGCGAACTGCGGGAACTGCCGAAACGGTAGGATCGCTTGCAGCAGTTCCGGCGGCGGGGCCCCCGGCGACGGGTG GCCCCGCTTTGCCATGAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MRKFIIASLILGSAATLGGCARNYAAEGTAVGAAAGAGVAAATGGDIATGAAIGGAVGAVGGSQIKKDNDRCWRYDRNGD RYWAC
Sequences:
>Translated_85_residues MRKFIIASLILGSAATLGGCARNYAAEGTAVGAAAGAGVAAATGGDIATGAAIGGAVGAVGGSQIKKDNDRCWRYDRNGD RYWAC >Mature_85_residues MRKFIIASLILGSAATLGGCARNYAAEGTAVGAAAGAGVAAATGGDIATGAAIGGAVGAVGGSQIKKDNDRCWRYDRNGD RYWAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8379; Mature: 8379
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKFIIASLILGSAATLGGCARNYAAEGTAVGAAAGAGVAAATGGDIATGAAIGGAVGAV CCHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCC GGSQIKKDNDRCWRYDRNGDRYWAC CCCCCCCCCCCEEEECCCCCEEECC >Mature Secondary Structure MRKFIIASLILGSAATLGGCARNYAAEGTAVGAAAGAGVAAATGGDIATGAAIGGAVGAV CCHHHHHHHHHCCCCHHCHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCHHCCC GGSQIKKDNDRCWRYDRNGDRYWAC CCCCCCCCCCCEEEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA