| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200054
Identifier: 87200054
GI number: 87200054
Start: 2173084
End: 2175678
Strand: Direct
Name: 87200054
Synonym: Saro_2038
Alternate gene names: NA
Gene position: 2173084-2175678 (Clockwise)
Preceding gene: 87200049
Following gene: 87200057
Centisome position: 61.01
GC content: 66.32
Gene sequence:
>2595_bases ATGAACGGGGGAACACGGATCATTCCGATCGACGGCGCCGAAACCGGCGGAACCGCAGCAAATCGCCTTGAAGCCGATGC GCCGCCCACGCCGACGCAGGGAAGCGACAGCAACGCAGGCGCGGCAATTCCGGACTGGTCGGACGATGCCGAATCGGCCA TTCCGGATCGCAGCTGGCCGGATCGCAGCTGGCCGGATCGCAGCTGGCCGGATCGTAGCTGGATCGCGCCGTCCCTCGCT TCGCTGGCCATCGCGGGATGGACGGTCTTCTTCGCGATCGCAGTTATCGTGCCCGCCGGGCTGGCCGGGAGCGGGGCGCA GTGGGCTGGCTGGATCGGCCAATGGTCTCTGCCGGTGCTGCTGGTTCTCGTCCTTCTGCTCGTCGTCATGCGCACGAGCC GCCGGGAAGCGGCGCGGTTTTCCGATGTTTCGTCGAGCCTTTCGCGGGAATCGCGGGAACTGGAAAAGCGCCTGTCGAGC GTGAACACCGAACTGTCGCTCGCGCGCGACTTCATGGCCGCCCAAGGCCGCGACCTCGACGCGCTGGGCCGCATAGCAGT AGAGCGCGTCTCCGGCAGCGCGGCACGCCTTGAGGAACTGGTCACACAGAACGGCCTGAAGATCGACCTGATTTCAGAAG TCTCCACCAATGCTTTGGACAACATGGAGAAACTTCGCAGCCAGCTTCCGGTCATCGCCAATTCCGCAAAGGACGTGACA AACAACATCGCGAACGCAGGACGCACGGCGCACCTCCAGCTCGAGGAACTGGTCTCCGGCCTCCAGCGGCTCAACGAGTT CGGCCTGGCGAGCGAACGGCAGGCGGCATCGTTCCGCGAGCGCGTGGAGGCGTCGCTCCAGGCATTTACCGCCTCGGCCG AGGATCTGGCACACCTTGCGGAAGGACGTTTCGAGACACTTGCCCATCACAGCAAGGTGCAGGCCGATGCCGCCGCGCAA GCGGAAGCCGCAGCCATGACGGCATGGGCGGAACGAACCGCCGCGCACACGACGACCTTGCAGCAGGCGCTGGCCCAGCT TGGAAACGACCACGAGAACATTCTCGCGGATGCAGTCGGCAGGCTCGGCAGGTTCGAGGATGCGGCCCGCTCGCTTACCG CGCTGCTCGATGCACAGGCGCGCGATCTCGACGAACAACTGGCGCGCAGGCGCGCTTCGGCGGAGGCGGCGGCGGCAGAG CAGCGCGACGCCCTGTCGCGGCGGCTTGGCGAAATCGACCAGCTCATCGCGGAGCGCCGGACGGCCATGGAAGCATCCGC GGCCCGCGCCGCCGAGACGCTTGCCGCGAAACTGGCCGACCTCGACAACGCGATCGAGGCGCAGCGCCGGACGCAATTGG CCGAAGCCGATCGTCTGGCCGAACAATGCGAGAAAATCAGCAGCAAGGTCAGTAGCTTCTCTGAAGTTCTTCGTAACTCA GGCGAGCAAGGTGAAGCCACTGCCGCAACGATCGACAAGGCAATGGCCGAACTCAACGAACGGCTCGGTGAAATGCGGCA CGCCCTGTCGGGTACGGACCTCCAGATCGGCGAGCTGACCGATTCAGCGGTGCGCCTGCTCGAGCTGATCCAGGCAGGTG GCGACCACACGCGCACCCAGATCCCCGAAGCACTGCGCAGCACCGAAGCGGGGCTGAAAGGCCTCGAGGACAGGGTTTTC ACCTTGCGCGACACGCTGCGGGAAGCGGGTGACGGCGGGCGACTGCTGTCCGAAAGCGTCGGTAGCGCGCACGGAGAGGT GTCTTCCACCCTCACCGAGTTGCAGAAGGCGCAGCAGGCTCTGGCCGAACAGGCTGCTGAACGCGAACGCCAGATCACCG CCCTGCGCGAGGCACTGGCCGGGACGCGCCGCGACAGCGAGGATCTTGGCCGCGAAATCGAGGAACGCCTGTCGGGCGCC ATCGGCCAGCTATCCGCTGCTGCCGGCGAGGCGGGCGAGACCCTTCGCTCCAGCACCGCCGGGGAAATCGAAGCGCTGGC CGAAAAGCTGGGCGAACAGAGCAGTGCCGCGATCGCGCGCGTGCTTCAGGGCCGGGCTGCGGAGCTGGTCGGGAGGCTGG AGGAGGCCATCGACGCCGCCGCAGCGGCAAGCCGCGATACCGCGATCCAGATGCGCGACCAGCTCGCCAAGGTCGACGAA CTTGCCGGCAATCTCGAATCGCGCGTCAACCGCGTGCGCGAGCGAGCCGAGGAGCAGGTCGACAACGACTTCGCCCGCCG CGCCGCGCTCATCACGGAATCGCTCAATTCCTCGGCAATCGACATTGCCAAGGCGCTTTCCACCGACGTTTCGGAAACCG CCTGGGCATCGTACCTGCGCGGCGACCGGGGCATCTTCACCCGCCGCGCGGTCTCGCTGCTGGAGAATGCCGAAGCCAAG GCGGTCCAAGCCCACTACGAGGCCGAGAGCGAGTTCCGCGAACACGTCAACCGCTACATCCACGACTTCGAGACGATGCT GCGCCAGCTCCTCTCGACGCGGGATGGCAACGCGCTTGGCGTCACGCTGCTGTCGTCGGATATGGGCAAGCTCTATGTCG CCCTGGCGCAGGGGATCGAGCGCCTTCGGACCTAG
Upstream 100 bases:
>100_bases GCATCGAGGGAAGCGCCTTCATAGGCCATACGACCGGGCTACGGGCCGAACCGTTAAGGCAGGGTTTATGGCGTCGGATA AATCGTGGTATGGAGCGGCG
Downstream 100 bases:
>100_bases CCGGACGAAATCTGCGAAAGCCGCGCAGCTACCTTCTGCAAGTCATTTGAAAATCTGGCTTCTTCTTCCGAACGCCCGCC GTCGTCCAGGCGCAGGAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Kinesin-Like Protein; ATPase; Chemotaxis Sensory Transducer
Number of amino acids: Translated: 864; Mature: 864
Protein sequence:
>864_residues MNGGTRIIPIDGAETGGTAANRLEADAPPTPTQGSDSNAGAAIPDWSDDAESAIPDRSWPDRSWPDRSWPDRSWIAPSLA SLAIAGWTVFFAIAVIVPAGLAGSGAQWAGWIGQWSLPVLLVLVLLLVVMRTSRREAARFSDVSSSLSRESRELEKRLSS VNTELSLARDFMAAQGRDLDALGRIAVERVSGSAARLEELVTQNGLKIDLISEVSTNALDNMEKLRSQLPVIANSAKDVT NNIANAGRTAHLQLEELVSGLQRLNEFGLASERQAASFRERVEASLQAFTASAEDLAHLAEGRFETLAHHSKVQADAAAQ AEAAAMTAWAERTAAHTTTLQQALAQLGNDHENILADAVGRLGRFEDAARSLTALLDAQARDLDEQLARRRASAEAAAAE QRDALSRRLGEIDQLIAERRTAMEASAARAAETLAAKLADLDNAIEAQRRTQLAEADRLAEQCEKISSKVSSFSEVLRNS GEQGEATAATIDKAMAELNERLGEMRHALSGTDLQIGELTDSAVRLLELIQAGGDHTRTQIPEALRSTEAGLKGLEDRVF TLRDTLREAGDGGRLLSESVGSAHGEVSSTLTELQKAQQALAEQAAERERQITALREALAGTRRDSEDLGREIEERLSGA IGQLSAAAGEAGETLRSSTAGEIEALAEKLGEQSSAAIARVLQGRAAELVGRLEEAIDAAAAASRDTAIQMRDQLAKVDE LAGNLESRVNRVRERAEEQVDNDFARRAALITESLNSSAIDIAKALSTDVSETAWASYLRGDRGIFTRRAVSLLENAEAK AVQAHYEAESEFREHVNRYIHDFETMLRQLLSTRDGNALGVTLLSSDMGKLYVALAQGIERLRT
Sequences:
>Translated_864_residues MNGGTRIIPIDGAETGGTAANRLEADAPPTPTQGSDSNAGAAIPDWSDDAESAIPDRSWPDRSWPDRSWPDRSWIAPSLA SLAIAGWTVFFAIAVIVPAGLAGSGAQWAGWIGQWSLPVLLVLVLLLVVMRTSRREAARFSDVSSSLSRESRELEKRLSS VNTELSLARDFMAAQGRDLDALGRIAVERVSGSAARLEELVTQNGLKIDLISEVSTNALDNMEKLRSQLPVIANSAKDVT NNIANAGRTAHLQLEELVSGLQRLNEFGLASERQAASFRERVEASLQAFTASAEDLAHLAEGRFETLAHHSKVQADAAAQ AEAAAMTAWAERTAAHTTTLQQALAQLGNDHENILADAVGRLGRFEDAARSLTALLDAQARDLDEQLARRRASAEAAAAE QRDALSRRLGEIDQLIAERRTAMEASAARAAETLAAKLADLDNAIEAQRRTQLAEADRLAEQCEKISSKVSSFSEVLRNS GEQGEATAATIDKAMAELNERLGEMRHALSGTDLQIGELTDSAVRLLELIQAGGDHTRTQIPEALRSTEAGLKGLEDRVF TLRDTLREAGDGGRLLSESVGSAHGEVSSTLTELQKAQQALAEQAAERERQITALREALAGTRRDSEDLGREIEERLSGA IGQLSAAAGEAGETLRSSTAGEIEALAEKLGEQSSAAIARVLQGRAAELVGRLEEAIDAAAAASRDTAIQMRDQLAKVDE LAGNLESRVNRVRERAEEQVDNDFARRAALITESLNSSAIDIAKALSTDVSETAWASYLRGDRGIFTRRAVSLLENAEAK AVQAHYEAESEFREHVNRYIHDFETMLRQLLSTRDGNALGVTLLSSDMGKLYVALAQGIERLRT >Mature_864_residues MNGGTRIIPIDGAETGGTAANRLEADAPPTPTQGSDSNAGAAIPDWSDDAESAIPDRSWPDRSWPDRSWPDRSWIAPSLA SLAIAGWTVFFAIAVIVPAGLAGSGAQWAGWIGQWSLPVLLVLVLLLVVMRTSRREAARFSDVSSSLSRESRELEKRLSS VNTELSLARDFMAAQGRDLDALGRIAVERVSGSAARLEELVTQNGLKIDLISEVSTNALDNMEKLRSQLPVIANSAKDVT NNIANAGRTAHLQLEELVSGLQRLNEFGLASERQAASFRERVEASLQAFTASAEDLAHLAEGRFETLAHHSKVQADAAAQ AEAAAMTAWAERTAAHTTTLQQALAQLGNDHENILADAVGRLGRFEDAARSLTALLDAQARDLDEQLARRRASAEAAAAE QRDALSRRLGEIDQLIAERRTAMEASAARAAETLAAKLADLDNAIEAQRRTQLAEADRLAEQCEKISSKVSSFSEVLRNS GEQGEATAATIDKAMAELNERLGEMRHALSGTDLQIGELTDSAVRLLELIQAGGDHTRTQIPEALRSTEAGLKGLEDRVF TLRDTLREAGDGGRLLSESVGSAHGEVSSTLTELQKAQQALAEQAAERERQITALREALAGTRRDSEDLGREIEERLSGA IGQLSAAAGEAGETLRSSTAGEIEALAEKLGEQSSAAIARVLQGRAAELVGRLEEAIDAAAAASRDTAIQMRDQLAKVDE LAGNLESRVNRVRERAEEQVDNDFARRAALITESLNSSAIDIAKALSTDVSETAWASYLRGDRGIFTRRAVSLLENAEAK AVQAHYEAESEFREHVNRYIHDFETMLRQLLSTRDGNALGVTLLSSDMGKLYVALAQGIERLRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92950; Mature: 92950
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGGTRIIPIDGAETGGTAANRLEADAPPTPTQGSDSNAGAAIPDWSDDAESAIPDRSWP CCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC DRSWPDRSWPDRSWIAPSLASLAIAGWTVFFAIAVIVPAGLAGSGAQWAGWIGQWSLPVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH LVLVLLLVVMRTSRREAARFSDVSSSLSRESRELEKRLSSVNTELSLARDFMAAQGRDLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHH ALGRIAVERVSGSAARLEELVTQNGLKIDLISEVSTNALDNMEKLRSQLPVIANSAKDVT HHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH NNIANAGRTAHLQLEELVSGLQRLNEFGLASERQAASFRERVEASLQAFTASAEDLAHLA HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EGRFETLAHHSKVQADAAAQAEAAAMTAWAERTAAHTTTLQQALAQLGNDHENILADAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RLGRFEDAARSLTALLDAQARDLDEQLARRRASAEAAAAEQRDALSRRLGEIDQLIAERR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAMEASAARAAETLAAKLADLDNAIEAQRRTQLAEADRLAEQCEKISSKVSSFSEVLRNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEQGEATAATIDKAMAELNERLGEMRHALSGTDLQIGELTDSAVRLLELIQAGGDHTRTQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH IPEALRSTEAGLKGLEDRVFTLRDTLREAGDGGRLLSESVGSAHGEVSSTLTELQKAQQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LAEQAAERERQITALREALAGTRRDSEDLGREIEERLSGAIGQLSAAAGEAGETLRSSTA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH GEIEALAEKLGEQSSAAIARVLQGRAAELVGRLEEAIDAAAAASRDTAIQMRDQLAKVDE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LAGNLESRVNRVRERAEEQVDNDFARRAALITESLNSSAIDIAKALSTDVSETAWASYLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH GDRGIFTRRAVSLLENAEAKAVQAHYEAESEFREHVNRYIHDFETMLRQLLSTRDGNALG CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VTLLSSDMGKLYVALAQGIERLRT HHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNGGTRIIPIDGAETGGTAANRLEADAPPTPTQGSDSNAGAAIPDWSDDAESAIPDRSWP CCCCCEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCC DRSWPDRSWPDRSWIAPSLASLAIAGWTVFFAIAVIVPAGLAGSGAQWAGWIGQWSLPVL CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHH LVLVLLLVVMRTSRREAARFSDVSSSLSRESRELEKRLSSVNTELSLARDFMAAQGRDLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHH ALGRIAVERVSGSAARLEELVTQNGLKIDLISEVSTNALDNMEKLRSQLPVIANSAKDVT HHHHHHHHHHCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHCCHHHHH NNIANAGRTAHLQLEELVSGLQRLNEFGLASERQAASFRERVEASLQAFTASAEDLAHLA HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH EGRFETLAHHSKVQADAAAQAEAAAMTAWAERTAAHTTTLQQALAQLGNDHENILADAVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH RLGRFEDAARSLTALLDAQARDLDEQLARRRASAEAAAAEQRDALSRRLGEIDQLIAERR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAMEASAARAAETLAAKLADLDNAIEAQRRTQLAEADRLAEQCEKISSKVSSFSEVLRNS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GEQGEATAATIDKAMAELNERLGEMRHALSGTDLQIGELTDSAVRLLELIQAGGDHTRTQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH IPEALRSTEAGLKGLEDRVFTLRDTLREAGDGGRLLSESVGSAHGEVSSTLTELQKAQQA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHH LAEQAAERERQITALREALAGTRRDSEDLGREIEERLSGAIGQLSAAAGEAGETLRSSTA HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCH GEIEALAEKLGEQSSAAIARVLQGRAAELVGRLEEAIDAAAAASRDTAIQMRDQLAKVDE HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LAGNLESRVNRVRERAEEQVDNDFARRAALITESLNSSAIDIAKALSTDVSETAWASYLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHH GDRGIFTRRAVSLLENAEAKAVQAHYEAESEFREHVNRYIHDFETMLRQLLSTRDGNALG CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VTLLSSDMGKLYVALAQGIERLRT HHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA