| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is trpE [H]
Identifier: 87200037
GI number: 87200037
Start: 2154555
End: 2156090
Strand: Direct
Name: trpE [H]
Synonym: Saro_2021
Alternate gene names: 87200037
Gene position: 2154555-2156090 (Clockwise)
Preceding gene: 87200036
Following gene: 87200038
Centisome position: 60.49
GC content: 68.82
Gene sequence:
>1536_bases ATGACCACGATCGACGCATCCGCCGTCTCGCTGCCGGAAAACCACCGCGCCGCGCTTTCCCAGCTTTCCGCCGGAAAGCC GGCGCTGGTCTGGCGCAAGCTGATCGTCGATACCGAGACTCCCGTCGGCGCCGCGCTCAAGCTGATGGAAAGCGGTCGCG GCGATTTCCTGCTCGAATCCGTGCAGGGCGGCGAAGTACGCGGGCGCTACAGCCTGCTCGGGCTCGATCCCGATCTCGTC TTCCGCGCCACCGGCTCGTCGGCAGAGATCAACCGCATCTGGCGGCACGACAAGGCAGCCTTCGCACCGCTACCCGGCGA TGCCCTCGCCGAACTGCGCGCGCTCGTCGCCTCCTGCCGCATCGACGTCCCGGCCGAGCTGCCCTCGGCGCTCGCCTGCC TCGTCGGCTACTTCGGCTACGAGACCATCGGCCTGGTCGAGAAGCTGCCCCGCGCACCGCAGAGCGAGCTTGTCCTGCCC GACATGCTGTTCACCCGCCCGACCGTGGTGCTGGTGTTCGACCGCCTGTCCGACGAACTCTTCGCCATCGCCCCGGTCTG GGCCGAAGGCGGCGATCCGGCGCGCCTGCTCGAAGCCGCGGCGGAGCGCATCGACAATGCCCTGCGCCGGCTGTCCGATC CGGTCCCCGCCGATGCGCGCCTTGCCGAAGCGGTCGACGTCACGCCGCAGCCAGTCATGGCCGCACCCGACTATGCGCGT ATGGTGACTGCCGCCAAGGACTACATCGAGGCGGGCGACATCTTCCAGGTCGTCCTCGCCCAGCGCTTCACCGCGCCCTT CCCGCTGCCGCCCATCGCGCTCTACCGTTCGCTGCGCCGCATCAATCCCTCGCCGTTCCTCTACTTCCTCGACATGCCGG GCTTTGCGCTCACCGGCTCCTCGCCGGAAATCCTGGTCCGCATCCGCGACGGCGAAGTCACGATCCGCCCGATTGCCGGC ACCCGCCCGCGCGGGCGCACCGCCGAGGAAGACCGGGCCAACGAAGAGAGCCTGCTGGCCGATCCCAAGGAACGCGCCGA ACACCTCATGCTGCTCGACCTCGGCCGCAACGACGTCGGCCGCGTGGCCAGGGCCGGCACCGTGAAAGTCACCGAAAGCT ACACGGTCGAACGCTACAGCCACGTGATGCACATCGTCTCGAACGTGGTCGGCCAGCTCGACACGAACCGCGCCGACAGC GTCGACGCCCTCTTCGCCGGGTTCCCCGCCGGCACAGTCTCGGGCGCACCCAAAGTCCGCGCCTGCGAGATCATCGCCGA ACTCGAACCCGAGACGCGCGGCGCCTACGCTGGCGGTGTCGGCTATTTCGCGCCCGACGGCTCTGTCGATAGCTGCATCG TCCTCAGGACCGGCATCCTCAAGGACGGCGTCCTCCATGTCCAGGCTGGCGCCGGCATCGTCGCCGACAGCGACCCCGCC TACGAACAGCGCGAATGCGAAGCCAAGAGCGGCGCCCTCTTCGCCGCCGCGCGCGAAGCCGTCCGTGTCGCCACAGAACC GAAGTTTGGCCAATGA
Upstream 100 bases:
>100_bases GCGATCGGCAAGGACCTTGGCATCGAACGCAACGAATCCGCGATCAAGGCCGTCCGCAACCAGCTGACCGGCGCGAACAA CCAGTAAGTCCACAAAGACG
Downstream 100 bases:
>100_bases TCCTCGTCATCGACAACTACGACAGCTTCACCTGGAACCTCGTCCACTACCTGATGGAGATGGGCGCCGAGGTCGAAGTC GTGCGCAACGATGCGCTGAC
Product: anthranilate synthase, component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTTIDASAVSLPENHRAALSQLSAGKPALVWRKLIVDTETPVGAALKLMESGRGDFLLESVQGGEVRGRYSLLGLDPDLV FRATGSSAEINRIWRHDKAAFAPLPGDALAELRALVASCRIDVPAELPSALACLVGYFGYETIGLVEKLPRAPQSELVLP DMLFTRPTVVLVFDRLSDELFAIAPVWAEGGDPARLLEAAAERIDNALRRLSDPVPADARLAEAVDVTPQPVMAAPDYAR MVTAAKDYIEAGDIFQVVLAQRFTAPFPLPPIALYRSLRRINPSPFLYFLDMPGFALTGSSPEILVRIRDGEVTIRPIAG TRPRGRTAEEDRANEESLLADPKERAEHLMLLDLGRNDVGRVARAGTVKVTESYTVERYSHVMHIVSNVVGQLDTNRADS VDALFAGFPAGTVSGAPKVRACEIIAELEPETRGAYAGGVGYFAPDGSVDSCIVLRTGILKDGVLHVQAGAGIVADSDPA YEQRECEAKSGALFAAAREAVRVATEPKFGQ
Sequences:
>Translated_511_residues MTTIDASAVSLPENHRAALSQLSAGKPALVWRKLIVDTETPVGAALKLMESGRGDFLLESVQGGEVRGRYSLLGLDPDLV FRATGSSAEINRIWRHDKAAFAPLPGDALAELRALVASCRIDVPAELPSALACLVGYFGYETIGLVEKLPRAPQSELVLP DMLFTRPTVVLVFDRLSDELFAIAPVWAEGGDPARLLEAAAERIDNALRRLSDPVPADARLAEAVDVTPQPVMAAPDYAR MVTAAKDYIEAGDIFQVVLAQRFTAPFPLPPIALYRSLRRINPSPFLYFLDMPGFALTGSSPEILVRIRDGEVTIRPIAG TRPRGRTAEEDRANEESLLADPKERAEHLMLLDLGRNDVGRVARAGTVKVTESYTVERYSHVMHIVSNVVGQLDTNRADS VDALFAGFPAGTVSGAPKVRACEIIAELEPETRGAYAGGVGYFAPDGSVDSCIVLRTGILKDGVLHVQAGAGIVADSDPA YEQRECEAKSGALFAAAREAVRVATEPKFGQ >Mature_510_residues TTIDASAVSLPENHRAALSQLSAGKPALVWRKLIVDTETPVGAALKLMESGRGDFLLESVQGGEVRGRYSLLGLDPDLVF RATGSSAEINRIWRHDKAAFAPLPGDALAELRALVASCRIDVPAELPSALACLVGYFGYETIGLVEKLPRAPQSELVLPD MLFTRPTVVLVFDRLSDELFAIAPVWAEGGDPARLLEAAAERIDNALRRLSDPVPADARLAEAVDVTPQPVMAAPDYARM VTAAKDYIEAGDIFQVVLAQRFTAPFPLPPIALYRSLRRINPSPFLYFLDMPGFALTGSSPEILVRIRDGEVTIRPIAGT RPRGRTAEEDRANEESLLADPKERAEHLMLLDLGRNDVGRVARAGTVKVTESYTVERYSHVMHIVSNVVGQLDTNRADSV DALFAGFPAGTVSGAPKVRACEIIAELEPETRGAYAGGVGYFAPDGSVDSCIVLRTGILKDGVLHVQAGAGIVADSDPAY EQRECEAKSGALFAAAREAVRVATEPKFGQ
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=395, Percent_Identity=36.7088607594937, Blast_Score=226, Evalue=4e-60, Organism=Escherichia coli, GI1788114, Length=352, Percent_Identity=36.0795454545455, Blast_Score=199, Evalue=5e-52, Organism=Escherichia coli, GI87082077, Length=296, Percent_Identity=29.7297297297297, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786809, Length=216, Percent_Identity=32.4074074074074, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=473, Percent_Identity=36.1522198731501, Blast_Score=260, Evalue=3e-70, Organism=Saccharomyces cerevisiae, GI6324361, Length=387, Percent_Identity=27.1317829457364, Blast_Score=104, Evalue=4e-23,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54903; Mature: 54772
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIDASAVSLPENHRAALSQLSAGKPALVWRKLIVDTETPVGAALKLMESGRGDFLLES CCCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEC VQGGEVRGRYSLLGLDPDLVFRATGSSAEINRIWRHDKAAFAPLPGDALAELRALVASCR CCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC IDVPAELPSALACLVGYFGYETIGLVEKLPRAPQSELVLPDMLFTRPTVVLVFDRLSDEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEEHHCCCE FAIAPVWAEGGDPARLLEAAAERIDNALRRLSDPVPADARLAEAVDVTPQPVMAAPDYAR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHH MVTAAKDYIEAGDIFQVVLAQRFTAPFPLPPIALYRSLRRINPSPFLYFLDMPGFALTGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECC SPEILVRIRDGEVTIRPIAGTRPRGRTAEEDRANEESLLADPKERAEHLMLLDLGRNDVG CCEEEEEEECCCEEEEECCCCCCCCCCCHHHCCCCHHHCCCHHHHHCEEEEEECCCCCHH RVARAGTVKVTESYTVERYSHVMHIVSNVVGQLDTNRADSVDALFAGFPAGTVSGAPKVR HHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHH ACEIIAELEPETRGAYAGGVGYFAPDGSVDSCIVLRTGILKDGVLHVQAGAGIVADSDPA HHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEECCCCC YEQRECEAKSGALFAAAREAVRVATEPKFGQ HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TTIDASAVSLPENHRAALSQLSAGKPALVWRKLIVDTETPVGAALKLMESGRGDFLLES CCCCCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEC VQGGEVRGRYSLLGLDPDLVFRATGSSAEINRIWRHDKAAFAPLPGDALAELRALVASCR CCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCC IDVPAELPSALACLVGYFGYETIGLVEKLPRAPQSELVLPDMLFTRPTVVLVFDRLSDEL CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCEEEEEEEHHCCCE FAIAPVWAEGGDPARLLEAAAERIDNALRRLSDPVPADARLAEAVDVTPQPVMAAPDYAR EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHH MVTAAKDYIEAGDIFQVVLAQRFTAPFPLPPIALYRSLRRINPSPFLYFLDMPGFALTGS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECC SPEILVRIRDGEVTIRPIAGTRPRGRTAEEDRANEESLLADPKERAEHLMLLDLGRNDVG CCEEEEEEECCCEEEEECCCCCCCCCCCHHHCCCCHHHCCCHHHHHCEEEEEECCCCCHH RVARAGTVKVTESYTVERYSHVMHIVSNVVGQLDTNRADSVDALFAGFPAGTVSGAPKVR HHHCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHH ACEIIAELEPETRGAYAGGVGYFAPDGSVDSCIVLRTGILKDGVLHVQAGAGIVADSDPA HHHHHHHCCCCCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCEEEEECCCCEEECCCCC YEQRECEAKSGALFAAAREAVRVATEPKFGQ HHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA