Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200027

Identifier: 87200027

GI number: 87200027

Start: 2144540

End: 2145019

Strand: Reverse

Name: 87200027

Synonym: Saro_2011

Alternate gene names: NA

Gene position: 2145019-2144540 (Counterclockwise)

Preceding gene: 87200028

Following gene: 87200026

Centisome position: 60.23

GC content: 66.04

Gene sequence:

>480_bases
ATGATTGTCTTTGATCTGCAATGCGGGCCGATGGGGCACCGTTTCGAGGGGTGGTTCGGCTCTTCGACGGATTTCGACGA
CCAATGCGCGCGCGGACTGGTGTCGTGTCCGACTTGCGGATCGCCCGAAGTGACCAAGGCCGTGATGGCGCCGAACGTGG
GGCGCAAGGGCAACCAGTTGCCGGCAGTTCCGCGTGGTGGAGCCGAGGTCGCGCCCCAGGCAGCGACGAACGCCCCGCTC
CCGCCCGAAGCGGTCGCGATGCTCAAGGCGGTTGCGGCGATGCAGGCCGAGGCGATCAAGTCCTCGACCTGGGTCGGCGA
GAATTTCGCCGACGATGCCCGCGCCATGCATTATGGCGAGAAGGACACCGTCGCGATCCACGGCAAGGCCACGCTGGACG
AGGCGCGCGAGCTAGTCGAGGAAGGCATTCCCGTCGCACCGCTGCTTTTCCCGGTGGTGCCGCCCGAGGAAACCAACTGA

Upstream 100 bases:

>100_bases
CGTCGCTGGGCTATGCCGTGATCGATCCTGCCCGAACGGACGAGGTCAGGGCACAGCTTCCCAGTCTTGCCAACAAGCGC
GAAATCCCTAGATCGGCCCC

Downstream 100 bases:

>100_bases
AAGAGCGTTGCCAGCGCCGTGCCCGCTGCCTAAAGGGAGCGCGGGCGCCCGTAGCTCAGCAGGATAGAGCACCAGATTCC
TAATCTGGGGGCCACAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MIVFDLQCGPMGHRFEGWFGSSTDFDDQCARGLVSCPTCGSPEVTKAVMAPNVGRKGNQLPAVPRGGAEVAPQAATNAPL
PPEAVAMLKAVAAMQAEAIKSSTWVGENFADDARAMHYGEKDTVAIHGKATLDEARELVEEGIPVAPLLFPVVPPEETN

Sequences:

>Translated_159_residues
MIVFDLQCGPMGHRFEGWFGSSTDFDDQCARGLVSCPTCGSPEVTKAVMAPNVGRKGNQLPAVPRGGAEVAPQAATNAPL
PPEAVAMLKAVAAMQAEAIKSSTWVGENFADDARAMHYGEKDTVAIHGKATLDEARELVEEGIPVAPLLFPVVPPEETN
>Mature_159_residues
MIVFDLQCGPMGHRFEGWFGSSTDFDDQCARGLVSCPTCGSPEVTKAVMAPNVGRKGNQLPAVPRGGAEVAPQAATNAPL
PPEAVAMLKAVAAMQAEAIKSSTWVGENFADDARAMHYGEKDTVAIHGKATLDEARELVEEGIPVAPLLFPVVPPEETN

Specific function: Unknown

COG id: COG5319

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16744; Mature: 16744

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVFDLQCGPMGHRFEGWFGSSTDFDDQCARGLVSCPTCGSPEVTKAVMAPNVGRKGNQL
CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PAVPRGGAEVAPQAATNAPLPPEAVAMLKAVAAMQAEAIKSSTWVGENFADDARAMHYGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
KDTVAIHGKATLDEARELVEEGIPVAPLLFPVVPPEETN
CCCEEEECCCCHHHHHHHHHCCCCCCHHEECCCCCCCCC
>Mature Secondary Structure
MIVFDLQCGPMGHRFEGWFGSSTDFDDQCARGLVSCPTCGSPEVTKAVMAPNVGRKGNQL
CEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCC
PAVPRGGAEVAPQAATNAPLPPEAVAMLKAVAAMQAEAIKSSTWVGENFADDARAMHYGE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
KDTVAIHGKATLDEARELVEEGIPVAPLLFPVVPPEETN
CCCEEEECCCCHHHHHHHHHCCCCCCHHEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA