Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200015

Identifier: 87200015

GI number: 87200015

Start: 2132808

End: 2133530

Strand: Reverse

Name: 87200015

Synonym: Saro_1999

Alternate gene names: NA

Gene position: 2133530-2132808 (Counterclockwise)

Preceding gene: 87200016

Following gene: 87200014

Centisome position: 59.9

GC content: 66.25

Gene sequence:

>723_bases
ATGAGCAAGGCCCTTGCAAGCGATGTCGCGATGGTGCTGTCGGCGGGCCTGGGCAAGAGGATGCGGCCGTTGACGGCGAC
GCGCCCGAAGCCGCTGGTCCATGTGGCGGGCAAGCCCCTGATCGACCATTCTCTCGACAAGCTCCAGGAACCTGGCGTGG
CGCGGGCGGTGGTCAACGTCCACTACCTTGCCGATGCGATGGAAGCCTATCTGGCGCAACGCAAGGACCCGCAGATCCTC
ATCTCGGACGAGCGGGAGGAGCTGCTCGAGACCGGCGGGGGCATGGTCAAGGCCTTGCCGCTGATCGGGACCGACCCGTT
CTTTGCGCTTAACAGCGACAACATCTGGCTCGACGGTCCGCGCAACGTGTTCCAGCACCTGTCGGACCATTGGGACGCGG
AACGGATGGACGCGCTGCTCCTGCTGGTTCCCCACGCCCGCGCGTTCAACTATCGCGGCAAGGGCGATTTTCACATGGAT
GCCCTCGGCCGCATCTCGCGGCGACGCAGCGGCCGTGTCGCCCCGTTCATCTATAGCGGTATCCAGCTCGTGTCCCACCG
TCTCCTGCGCGATGCACCCGAGGGCGCCTTCGGCACGATGAAGCTGTGGGAGCGTGCGATAGGGGAAGGGCGCCTGTTCG
GCGTGTCGCACCTCGGCCTGTGGTACGAGGTCGGCGAACCCGGCATGATCGCCCCGACCGAGGCGGCGTTGCGGCAGGAC
TGA

Upstream 100 bases:

>100_bases
AGCGCGATCTGGCCCATCCGGCGCTGGCTCCCGTGGCCGAGTGGTTCGACCGGAACATCCCCGCGGAGCTTCGCGAGGCG
CGCGGGGGCGCGTTCGAGGC

Downstream 100 bases:

>100_bases
TGGACGACGCCCGCGCCCGCCCGCGCGTCTGGTCGATCGCGGCGCATCGCGGCTTTGCCGACGCGCTCGTCGCGGGTCTC
GTCCCGCGTTATCGCGAGGA

Product: nucleotidyl transferase

Products: NA

Alternate protein names: Nucleotidyltransferase Family Protein; Nucleotidyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase; Mannose-1-Phosphate Guanyltransferase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; Nucleotidyl Transferase Superfamily; Nucleotidyltransferase; Sugar-Phosphate Nucleotidyl Transferase; Nucleotidyl Transferase Protein; Mannose-1-Phosphate Guanyltransferase-Related Protein; Nucleotidyltransferase Protein; Transaldolase AB; ADP-Glucose Pyrophosphorylase; Aminoglycoside Phosphotransferase; Nucleotidyl Transferase Superfamily Protein

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MSKALASDVAMVLSAGLGKRMRPLTATRPKPLVHVAGKPLIDHSLDKLQEPGVARAVVNVHYLADAMEAYLAQRKDPQIL
ISDEREELLETGGGMVKALPLIGTDPFFALNSDNIWLDGPRNVFQHLSDHWDAERMDALLLLVPHARAFNYRGKGDFHMD
ALGRISRRRSGRVAPFIYSGIQLVSHRLLRDAPEGAFGTMKLWERAIGEGRLFGVSHLGLWYEVGEPGMIAPTEAALRQD

Sequences:

>Translated_240_residues
MSKALASDVAMVLSAGLGKRMRPLTATRPKPLVHVAGKPLIDHSLDKLQEPGVARAVVNVHYLADAMEAYLAQRKDPQIL
ISDEREELLETGGGMVKALPLIGTDPFFALNSDNIWLDGPRNVFQHLSDHWDAERMDALLLLVPHARAFNYRGKGDFHMD
ALGRISRRRSGRVAPFIYSGIQLVSHRLLRDAPEGAFGTMKLWERAIGEGRLFGVSHLGLWYEVGEPGMIAPTEAALRQD
>Mature_239_residues
SKALASDVAMVLSAGLGKRMRPLTATRPKPLVHVAGKPLIDHSLDKLQEPGVARAVVNVHYLADAMEAYLAQRKDPQILI
SDEREELLETGGGMVKALPLIGTDPFFALNSDNIWLDGPRNVFQHLSDHWDAERMDALLLLVPHARAFNYRGKGDFHMDA
LGRISRRRSGRVAPFIYSGIQLVSHRLLRDAPEGAFGTMKLWERAIGEGRLFGVSHLGLWYEVGEPGMIAPTEAALRQD

Specific function: Unknown

COG id: COG1208

COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI11761619, Length=226, Percent_Identity=30.9734513274336, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI11761621, Length=226, Percent_Identity=30.9734513274336, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI133931050, Length=225, Percent_Identity=30.2222222222222, Blast_Score=78, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355443, Length=126, Percent_Identity=36.5079365079365, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI24644084, Length=126, Percent_Identity=36.5079365079365, Blast_Score=74, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26549; Mature: 26418

Theoretical pI: Translated: 8.02; Mature: 8.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKALASDVAMVLSAGLGKRMRPLTATRPKPLVHVAGKPLIDHSLDKLQEPGVARAVVNV
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHH
HYLADAMEAYLAQRKDPQILISDEREELLETGGGMVKALPLIGTDPFFALNSDNIWLDGP
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEECCH
RNVFQHLSDHWDAERMDALLLLVPHARAFNYRGKGDFHMDALGRISRRRSGRVAPFIYSG
HHHHHHHHHCCCHHHHCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
IQLVSHRLLRDAPEGAFGTMKLWERAIGEGRLFGVSHLGLWYEVGEPGMIAPTEAALRQD
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHCCEEEEECCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SKALASDVAMVLSAGLGKRMRPLTATRPKPLVHVAGKPLIDHSLDKLQEPGVARAVVNV
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHH
HYLADAMEAYLAQRKDPQILISDEREELLETGGGMVKALPLIGTDPFFALNSDNIWLDGP
HHHHHHHHHHHHHCCCCCEEECCCHHHHHHCCCCEEEEEEEECCCCEEEECCCCEEECCH
RNVFQHLSDHWDAERMDALLLLVPHARAFNYRGKGDFHMDALGRISRRRSGRVAPFIYSG
HHHHHHHHHCCCHHHHCEEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
IQLVSHRLLRDAPEGAFGTMKLWERAIGEGRLFGVSHLGLWYEVGEPGMIAPTEAALRQD
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEHHCCEEEEECCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA