| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200008
Identifier: 87200008
GI number: 87200008
Start: 2122230
End: 2122520
Strand: Reverse
Name: 87200008
Synonym: Saro_1991
Alternate gene names: NA
Gene position: 2122520-2122230 (Counterclockwise)
Preceding gene: 87200012
Following gene: 87200007
Centisome position: 59.59
GC content: 70.1
Gene sequence:
>291_bases ATGGAATGCCTATCTGGTGCGGTGATGCGCATTCTGCTCGCCCTGCTGGCCATGATTACGGGCCTTTCCCTGCCGGAGGT GGCGTTCGCCGTCTCGCGCACGGAAGTTGCGGATGCGGGCGTTTCGGCCAGCGCGACGGCCTCGGCGGAGCAGCGGCAGC AGCGCTGCGCCGGTCGGGGTGGCGCGGTCCCGCAAAAGCGCACGAGCGCCCGCCGCAAGACGGTGTGGCTTCCCGCCCCG GCACTGATCCGGCCCTGCGGCATTGAACTGAGCGACCGCGCGCGCGAATAG
Upstream 100 bases:
>100_bases TGCCGACGGCAAGGCGGTGGCGAAGAGGGTGATCATGAAGTCTTCACTCGAACTCGAAGATGTCGCGAAGTAAATCAGCT TTCGCGATGGACGAACCGCG
Downstream 100 bases:
>100_bases CGCCGATCGATCGCATAGGTTTTCCGGCAATTTGCATTGCCTGCAACGGCGCGTCCGATGCGCGCCGGCTATCCATATCT CATTTTCGACAGGATTGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MECLSGAVMRILLALLAMITGLSLPEVAFAVSRTEVADAGVSASATASAEQRQQRCAGRGGAVPQKRTSARRKTVWLPAP ALIRPCGIELSDRARE
Sequences:
>Translated_96_residues MECLSGAVMRILLALLAMITGLSLPEVAFAVSRTEVADAGVSASATASAEQRQQRCAGRGGAVPQKRTSARRKTVWLPAP ALIRPCGIELSDRARE >Mature_96_residues MECLSGAVMRILLALLAMITGLSLPEVAFAVSRTEVADAGVSASATASAEQRQQRCAGRGGAVPQKRTSARRKTVWLPAP ALIRPCGIELSDRARE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10120; Mature: 10120
Theoretical pI: Translated: 10.68; Mature: 10.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MECLSGAVMRILLALLAMITGLSLPEVAFAVSRTEVADAGVSASATASAEQRQQRCAGRG CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GAVPQKRTSARRKTVWLPAPALIRPCGIELSDRARE CCCCCHHHHHHHCEECCCCHHHHCCCCCCCCCCCCC >Mature Secondary Structure MECLSGAVMRILLALLAMITGLSLPEVAFAVSRTEVADAGVSASATASAEQRQQRCAGRG CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCC GAVPQKRTSARRKTVWLPAPALIRPCGIELSDRARE CCCCCHHHHHHHCEECCCCHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA