| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199995
Identifier: 87199995
GI number: 87199995
Start: 2095976
End: 2096539
Strand: Direct
Name: 87199995
Synonym: Saro_1978
Alternate gene names: NA
Gene position: 2095976-2096539 (Clockwise)
Preceding gene: 87199989
Following gene: 87199997
Centisome position: 58.85
GC content: 64.54
Gene sequence:
>564_bases GTGAAGAATTCCACTCTGTCGCTTGCCCTTCTCGTCGCATCCCTCCCATTCGCCCCTTCGGCCATCGCCCAGGAAGCCGC CGCCAGCGCAGCACCTGCGGCTGCCGCAACGCCGACCGTGGGGACCAAGGTCTATGATGCCGCCGGCGCCGAAGTCGGCA CCATCAAGAGCGTCAACGCCCCCAACTTCGTCATCGACACCGGCAAGAATGCTGCCACGCTTGCCCTGACTTCGCTCGGC TCAGGTCCGAAAGGCCCTGTTCTCGGAATGACGAAGGAGCAGCTTGATGCCGCTGCCGAAAAGGCTGCAGCCGACGCTGC TGCCGTGCTTGCCGCCGCCATCGTGGTCGATGCGCCGGTCCATGCCTCGGACGGCACGACCGTTCTGGGCAAGATCGCCG AGGTGACCGAAACGGACTTCGTTCTCGACACCGGCAAGGCCCGCGTGAAGTTGCCGAAGACGTCGGTGGCAAAGGGTACG AACGGTCTTGTGATCGGCATGACCGCCGAAGCCTTTGCCGACGCGACGAAGAGCGCGTCGCCCGCCGCCAAGACCAGCAA GTAA
Upstream 100 bases:
>100_bases CCTGAAAAGTGCAGAAAAGACCGCATTCGGGTTTGCGCGGTGGGATCTTGTTTCCAGTTTTGCAGAGGTCAGCCCTTCAA CTGGACAGGAGCCCTCGTTC
Downstream 100 bases:
>100_bases TCCCATCAGGGAGGGGGCGGCGCGTTTCCCCTTTTTCGCGTCGCCCCATCCCTTTCGGCGCTAACCGCCGCGCAGTAACT GGACGCCCCAGTCGCGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MKNSTLSLALLVASLPFAPSAIAQEAAASAAPAAAATPTVGTKVYDAAGAEVGTIKSVNAPNFVIDTGKNAATLALTSLG SGPKGPVLGMTKEQLDAAAEKAAADAAAVLAAAIVVDAPVHASDGTTVLGKIAEVTETDFVLDTGKARVKLPKTSVAKGT NGLVIGMTAEAFADATKSASPAAKTSK
Sequences:
>Translated_187_residues MKNSTLSLALLVASLPFAPSAIAQEAAASAAPAAAATPTVGTKVYDAAGAEVGTIKSVNAPNFVIDTGKNAATLALTSLG SGPKGPVLGMTKEQLDAAAEKAAADAAAVLAAAIVVDAPVHASDGTTVLGKIAEVTETDFVLDTGKARVKLPKTSVAKGT NGLVIGMTAEAFADATKSASPAAKTSK >Mature_187_residues MKNSTLSLALLVASLPFAPSAIAQEAAASAAPAAAATPTVGTKVYDAAGAEVGTIKSVNAPNFVIDTGKNAATLALTSLG SGPKGPVLGMTKEQLDAAAEKAAADAAAVLAAAIVVDAPVHASDGTTVLGKIAEVTETDFVLDTGKARVKLPKTSVAKGT NGLVIGMTAEAFADATKSASPAAKTSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18229; Mature: 18229
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSTLSLALLVASLPFAPSAIAQEAAASAAPAAAATPTVGTKVYDAAGAEVGTIKSVNA CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEECCC PNFVIDTGKNAATLALTSLGSGPKGPVLGMTKEQLDAAAEKAAADAAAVLAAAIVVDAPV CCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HASDGTTVLGKIAEVTETDFVLDTGKARVKLPKTSVAKGTNGLVIGMTAEAFADATKSAS CCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCHHCCCCCCEEEEEEHHHHHHHHCCCC PAAKTSK CCCCCCC >Mature Secondary Structure MKNSTLSLALLVASLPFAPSAIAQEAAASAAPAAAATPTVGTKVYDAAGAEVGTIKSVNA CCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCEEEECCC PNFVIDTGKNAATLALTSLGSGPKGPVLGMTKEQLDAAAEKAAADAAAVLAAAIVVDAPV CCEEEECCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HASDGTTVLGKIAEVTETDFVLDTGKARVKLPKTSVAKGTNGLVIGMTAEAFADATKSAS CCCCCCHHHHHHHHHHCCCEEEECCCCEEECCCCHHCCCCCCEEEEEEHHHHHHHHCCCC PAAKTSK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA