| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is fda [H]
Identifier: 87199981
GI number: 87199981
Start: 2081972
End: 2082877
Strand: Reverse
Name: fda [H]
Synonym: Saro_1964
Alternate gene names: 87199981
Gene position: 2082877-2081972 (Counterclockwise)
Preceding gene: 87199982
Following gene: 87199979
Centisome position: 58.48
GC content: 61.7
Gene sequence:
>906_bases ATGAACACGACCGAAATGACCGCGAAGATGGCCTCTGGCGATGGTTTCATTGCCGCTCTCGACCAGTCAGGCGGTTCGAC GCCGAAGGCGCTCAAGGGCTACGGCATCGAAGAGGGGGCCTGGAATTCCGAAGAGGAAATGTTCGGCCTGATCCACGAGA TGCGCGCCCGTATTATCCGTTCGGCCGCATTCGACGGCAGCAAGGTCATCGGAGCCATCCTGTTCGAGCGCACGATGGAC GGGGCGGTCGACGGCAAGCCGGTCCCCGCTGCGCTGATCGAAAAGGGCGTCGTGCCCTTCATCAAGATCGACAAGGGCCT CGAGGATGAGGCGAACGGCGTCCAGCTCATGAAGCCGATGCCTACCCTCGACGACCTGCTCATGCGGTCCAAGGCTCTCG GTGTCTACGGGACCAAGGAGCGCTCGGTCATCAATTCGGCCAATCGCGAAGGCATTGCAGCCGTGGTCGCGCAGCAGTTC GAAGTGGGCAAGCAGGTCCTGTCGCACGGCATGATGCCGATCATCGAGCCCGAGGTGAACATCAAGAGCGAGACCCGCGC CGAATGCGACGCGATCCTGCTCGACGAGATCCTGAAGAACCTCGACGCGCTGCCTGAAGGCACCCAGGTCATGCTCAAGC TCTCGCTGCCGGTCGTTGCTGGCACTTTCGATCCGCTGGTCTCGCACCCCAAGGTTTTGCGCGTCGTGGCGCTTTCGGGC GGATACAAGCGCCCCGAAGCGTGCGTCGAACTTGCGAAGAACAATGGCATCATCGCCAGCTTCAGCCGTGCGCTCCTCGA AGATCTGCGGCATCAGATGAGCGATGCGGAATTCGACGCTGCGCTGGGCGCGGCAATTGACGAGATTTACACTGGCTCGA CGCAGAAGACGCTCGTCGCTGCCTGA
Upstream 100 bases:
>100_bases CAGACGCCCGGTTGGTTTGCCGAGCGTCTTTTTCCGGCGGATTTACGCATAGGTATGCGGAGCCCGTATTCTGGGCCTTC CGCAAGAACAGGACAGGCTG
Downstream 100 bases:
>100_bases CACATCCGTTTGAGAGGACGGAAAGGCCGCCCCGCCGCCGGTACAGCCGGGGTGGGGCGTTTTGCTTGTGCTGTTGCTGC GTGCCTTACTGCGCCACGCT
Product: fructose-1,6-bisphosphate aldolase
Products: NA
Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA
Sequences:
>Translated_301_residues MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA >Mature_301_residues MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA
Specific function: Unknown
COG id: COG3588
COG function: function code G; Fructose-1,6-bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000741 - InterPro: IPR013785 - InterPro: IPR023014 [H]
Pfam domain/function: PF00274 Glycolytic [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 32200; Mature: 32200
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIR CCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH SAAFDGSKVIGAILFERTMDGAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPM HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCC PTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQFEVGKQVLSHGMMPIIEPEVN CCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCC IKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCCHHEEEEEECC GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVA CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC A C >Mature Secondary Structure MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIR CCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH SAAFDGSKVIGAILFERTMDGAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPM HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCC PTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQFEVGKQVLSHGMMPIIEPEVN CCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCC IKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCCHHEEEEEECC GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVA CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC A C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11889109 [H]