Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is fda [H]

Identifier: 87199981

GI number: 87199981

Start: 2081972

End: 2082877

Strand: Reverse

Name: fda [H]

Synonym: Saro_1964

Alternate gene names: 87199981

Gene position: 2082877-2081972 (Counterclockwise)

Preceding gene: 87199982

Following gene: 87199979

Centisome position: 58.48

GC content: 61.7

Gene sequence:

>906_bases
ATGAACACGACCGAAATGACCGCGAAGATGGCCTCTGGCGATGGTTTCATTGCCGCTCTCGACCAGTCAGGCGGTTCGAC
GCCGAAGGCGCTCAAGGGCTACGGCATCGAAGAGGGGGCCTGGAATTCCGAAGAGGAAATGTTCGGCCTGATCCACGAGA
TGCGCGCCCGTATTATCCGTTCGGCCGCATTCGACGGCAGCAAGGTCATCGGAGCCATCCTGTTCGAGCGCACGATGGAC
GGGGCGGTCGACGGCAAGCCGGTCCCCGCTGCGCTGATCGAAAAGGGCGTCGTGCCCTTCATCAAGATCGACAAGGGCCT
CGAGGATGAGGCGAACGGCGTCCAGCTCATGAAGCCGATGCCTACCCTCGACGACCTGCTCATGCGGTCCAAGGCTCTCG
GTGTCTACGGGACCAAGGAGCGCTCGGTCATCAATTCGGCCAATCGCGAAGGCATTGCAGCCGTGGTCGCGCAGCAGTTC
GAAGTGGGCAAGCAGGTCCTGTCGCACGGCATGATGCCGATCATCGAGCCCGAGGTGAACATCAAGAGCGAGACCCGCGC
CGAATGCGACGCGATCCTGCTCGACGAGATCCTGAAGAACCTCGACGCGCTGCCTGAAGGCACCCAGGTCATGCTCAAGC
TCTCGCTGCCGGTCGTTGCTGGCACTTTCGATCCGCTGGTCTCGCACCCCAAGGTTTTGCGCGTCGTGGCGCTTTCGGGC
GGATACAAGCGCCCCGAAGCGTGCGTCGAACTTGCGAAGAACAATGGCATCATCGCCAGCTTCAGCCGTGCGCTCCTCGA
AGATCTGCGGCATCAGATGAGCGATGCGGAATTCGACGCTGCGCTGGGCGCGGCAATTGACGAGATTTACACTGGCTCGA
CGCAGAAGACGCTCGTCGCTGCCTGA

Upstream 100 bases:

>100_bases
CAGACGCCCGGTTGGTTTGCCGAGCGTCTTTTTCCGGCGGATTTACGCATAGGTATGCGGAGCCCGTATTCTGGGCCTTC
CGCAAGAACAGGACAGGCTG

Downstream 100 bases:

>100_bases
CACATCCGTTTGAGAGGACGGAAAGGCCGCCCCGCCGCCGGTACAGCCGGGGTGGGGCGTTTTGCTTGTGCTGTTGCTGC
GTGCCTTACTGCGCCACGCT

Product: fructose-1,6-bisphosphate aldolase

Products: NA

Alternate protein names: Fructose-biphosphate aldolase class I; FBP aldolase [H]

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD
GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF
EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG
GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA

Sequences:

>Translated_301_residues
MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD
GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF
EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG
GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA
>Mature_301_residues
MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIRSAAFDGSKVIGAILFERTMD
GAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPMPTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQF
EVGKQVLSHGMMPIIEPEVNIKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG
GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVAA

Specific function: Unknown

COG id: COG3588

COG function: function code G; Fructose-1,6-bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class I fructose-bisphosphate aldolase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000741
- InterPro:   IPR013785
- InterPro:   IPR023014 [H]

Pfam domain/function: PF00274 Glycolytic [H]

EC number: =4.1.2.13 [H]

Molecular weight: Translated: 32200; Mature: 32200

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIR
CCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SAAFDGSKVIGAILFERTMDGAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPM
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCC
PTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQFEVGKQVLSHGMMPIIEPEVN
CCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
IKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCCHHEEEEEECC
GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC
A
C
>Mature Secondary Structure
MNTTEMTAKMASGDGFIAALDQSGGSTPKALKGYGIEEGAWNSEEEMFGLIHEMRARIIR
CCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SAAFDGSKVIGAILFERTMDGAVDGKPVPAALIEKGVVPFIKIDKGLEDEANGVQLMKPM
HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCEEEECCC
PTLDDLLMRSKALGVYGTKERSVINSANREGIAAVVAQQFEVGKQVLSHGMMPIIEPEVN
CCHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCC
IKSETRAECDAILLDEILKNLDALPEGTQVMLKLSLPVVAGTFDPLVSHPKVLRVVALSG
CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHCCHHHHHCCCHHEEEEEECC
GYKRPEACVELAKNNGIIASFSRALLEDLRHQMSDAEFDAALGAAIDEIYTGSTQKTLVA
CCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11889109 [H]