Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199918

Identifier: 87199918

GI number: 87199918

Start: 2013392

End: 2015284

Strand: Direct

Name: 87199918

Synonym: Saro_1901

Alternate gene names: NA

Gene position: 2013392-2015284 (Clockwise)

Preceding gene: 87199915

Following gene: 87199919

Centisome position: 56.53

GC content: 65.61

Gene sequence:

>1893_bases
ATGAAGCTGCGCATTCCGCTCCTTTCGGGTGCAGCAGCTCTGGTCGTGGTGTCGGGCACGCTGCTTGCCCAGGAATCGCT
CCTTCCGCCGGGTTTCGACAGTCCCGCCACGCCTGCCCGGCCTGCGCAGCAGCGCTCCACGGCGCCCGCCGCCCCGCGAC
TTGCCACGCCTGCAGCACGGCCCAGCGCGGCGTCGGCTCCTTCTTCGCCGGCCGCCACTTCGAGCCCGGTCGTACAGCCG
ATCCCGGTCTCTTCAGCTCCGCCTCCGGTCCAGTCCCCGCTAGGGGTAAGCGATCAGGCCCTGCTGGATTCGCTCGATCC
GGCGCTTCTTGCCAAACTGATCGAATCCGCCCGCCCGAAGTACGACATCCCTCCCTCCGGGCAGCGCAGCCTCGATATCG
TCGGTGTCATCGACGCAAGCGACGGCGGCCTGCCCGCCGGCTCGACGCATTATCTCAACGGCCCGTTCGTGGAAGGTGTC
ATCAACAAGATGCACGGGCGGTTCGTTTCGCGCTGGGGGCACATCCTTGCGCGGCGTGCAGTTGCCAGCAGGCTTGCCAC
GCCCGTTGGAATGAATGGCGCCGACTGGGCGGCAATCCGGGCCCAGCTCTTGCTGCGCATGGGCGAGGCTGACGTTGCGC
GCGCGATGGTGCAATCCGTGGACAGCGGCAATTTCACCCGCAGTCTCGAAGACGCCGCGATGGCAAGCTTCCTTGCCACC
GCCGATCCCGTCGGCTTGTGTCCGATTACCGCCCTTACCGCTGCTAGCCGCCCCGGGTGGGACTGGGACCTTGTTCGCGC
CATCTGTTCGGCATTCACAGACGAAGGCTCCCCGGCGATGGCGCAGCTTGATCGCGCGATGCGGCGCGGCGCCGGCAGCA
AGATCGACATTCTCCTTGCCCAGAAGTTCGCTGGTGCGGCCACCAATGCTCGGCGAGCGGTCAAGATCGAATGGGACGAC
GTCGAAGCGCTGACGCCCTGGAGCATCGGCATGTCCTTCGCGACCGGGCTTGAGCCTCCGGAAGCGCTGAGGGCCAAGGC
CGGAATCGGCTATGTGCTGCTTGCCGCCCGCGCCCCGATGCTGCCCATTTCGTCCCGCGCAGCGGGAGCCGACGAAGCCG
CGGCCCGAGGCGTGATGTCGAGCGAGGCGATGATCGACCTCTATTCGCAGATCTACGCCCTGCGCGAGGATGACGGCGGC
AGTTCACAAGCCGACGAATGGAGCCGCCGCGCCGAAACGCTGCGGACGGCCTACGTCGCGGAGGCAGCATCAGACCGGCT
CGATGCGATCCGCTCGTTGTGGGGGGACAGCAGCGACCCGAACAAGGCTTATGCAGGACTTGTGCTCACTTCGCATGCTG
CAGCCCGCATTGCGCCCGAAGAGGGGCTTTCCGACAGTGCCGAAGCACTGATCGCGGCAATGCTTGCAGCCGGATTGGAT
CGCAATGCCCTGAAATGGGCGCCGTACCTTCCGGTTGGAAGCGAAGGGTGGGGACTTCTGGTCCTCGCCAATCCGGGCCG
GACAAATCGCGTTGGCACCGAAGGCCTCGATGCATTCGCCGGCGAGGACGATTCCGAGGGTACGTTGCGCAGCCGTTTTC
TCGTGGCAGGGCTTATGGGACTGGAGCGGGTCGACGATGCCGCTGCCCGCGATTTCGCAAAAAAGCTTGGTGTCGATTTC
AACCGACAGACGCGATGGACCCGCGCCATCGAAAGTGCGGCATCGTCGAACAATCCGGCACTCGTGGCGTTGCTCGCAGC
ATTCGGCATGCAGGGAGATCGCTGGGACAAGATGACCCCGCTGCACCTATATCACATCGTGTCCGCGCTCCATCGCGTCG
GTCTCGACGGAGAGGCGAGAATGATCGCGGCCGAAGCGGTCGCCCGCGTCTGA

Upstream 100 bases:

>100_bases
CACTCCTGCTGGTTGCTATTCTCTTGTTGGCATGGATGAAGGGTGGGACGCAGCCGATGCGCTGGATCGAACAACCGGTC
GGTAACGGAAGCCCCAGCCA

Downstream 100 bases:

>100_bases
ACTGTGCGTCGCACGGTCGAACCCGCCGTCGAGAACTTCCTGGCGATGCTGGCGGCGCAACGCGGCGCGGCGGCCAATAC
GCTCGCGGCATACCGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 630; Mature: 630

Protein sequence:

>630_residues
MKLRIPLLSGAAALVVVSGTLLAQESLLPPGFDSPATPARPAQQRSTAPAAPRLATPAARPSAASAPSSPAATSSPVVQP
IPVSSAPPPVQSPLGVSDQALLDSLDPALLAKLIESARPKYDIPPSGQRSLDIVGVIDASDGGLPAGSTHYLNGPFVEGV
INKMHGRFVSRWGHILARRAVASRLATPVGMNGADWAAIRAQLLLRMGEADVARAMVQSVDSGNFTRSLEDAAMASFLAT
ADPVGLCPITALTAASRPGWDWDLVRAICSAFTDEGSPAMAQLDRAMRRGAGSKIDILLAQKFAGAATNARRAVKIEWDD
VEALTPWSIGMSFATGLEPPEALRAKAGIGYVLLAARAPMLPISSRAAGADEAAARGVMSSEAMIDLYSQIYALREDDGG
SSQADEWSRRAETLRTAYVAEAASDRLDAIRSLWGDSSDPNKAYAGLVLTSHAAARIAPEEGLSDSAEALIAAMLAAGLD
RNALKWAPYLPVGSEGWGLLVLANPGRTNRVGTEGLDAFAGEDDSEGTLRSRFLVAGLMGLERVDDAAARDFAKKLGVDF
NRQTRWTRAIESAASSNNPALVALLAAFGMQGDRWDKMTPLHLYHIVSALHRVGLDGEARMIAAEAVARV

Sequences:

>Translated_630_residues
MKLRIPLLSGAAALVVVSGTLLAQESLLPPGFDSPATPARPAQQRSTAPAAPRLATPAARPSAASAPSSPAATSSPVVQP
IPVSSAPPPVQSPLGVSDQALLDSLDPALLAKLIESARPKYDIPPSGQRSLDIVGVIDASDGGLPAGSTHYLNGPFVEGV
INKMHGRFVSRWGHILARRAVASRLATPVGMNGADWAAIRAQLLLRMGEADVARAMVQSVDSGNFTRSLEDAAMASFLAT
ADPVGLCPITALTAASRPGWDWDLVRAICSAFTDEGSPAMAQLDRAMRRGAGSKIDILLAQKFAGAATNARRAVKIEWDD
VEALTPWSIGMSFATGLEPPEALRAKAGIGYVLLAARAPMLPISSRAAGADEAAARGVMSSEAMIDLYSQIYALREDDGG
SSQADEWSRRAETLRTAYVAEAASDRLDAIRSLWGDSSDPNKAYAGLVLTSHAAARIAPEEGLSDSAEALIAAMLAAGLD
RNALKWAPYLPVGSEGWGLLVLANPGRTNRVGTEGLDAFAGEDDSEGTLRSRFLVAGLMGLERVDDAAARDFAKKLGVDF
NRQTRWTRAIESAASSNNPALVALLAAFGMQGDRWDKMTPLHLYHIVSALHRVGLDGEARMIAAEAVARV
>Mature_630_residues
MKLRIPLLSGAAALVVVSGTLLAQESLLPPGFDSPATPARPAQQRSTAPAAPRLATPAARPSAASAPSSPAATSSPVVQP
IPVSSAPPPVQSPLGVSDQALLDSLDPALLAKLIESARPKYDIPPSGQRSLDIVGVIDASDGGLPAGSTHYLNGPFVEGV
INKMHGRFVSRWGHILARRAVASRLATPVGMNGADWAAIRAQLLLRMGEADVARAMVQSVDSGNFTRSLEDAAMASFLAT
ADPVGLCPITALTAASRPGWDWDLVRAICSAFTDEGSPAMAQLDRAMRRGAGSKIDILLAQKFAGAATNARRAVKIEWDD
VEALTPWSIGMSFATGLEPPEALRAKAGIGYVLLAARAPMLPISSRAAGADEAAARGVMSSEAMIDLYSQIYALREDDGG
SSQADEWSRRAETLRTAYVAEAASDRLDAIRSLWGDSSDPNKAYAGLVLTSHAAARIAPEEGLSDSAEALIAAMLAAGLD
RNALKWAPYLPVGSEGWGLLVLANPGRTNRVGTEGLDAFAGEDDSEGTLRSRFLVAGLMGLERVDDAAARDFAKKLGVDF
NRQTRWTRAIESAASSNNPALVALLAAFGMQGDRWDKMTPLHLYHIVSALHRVGLDGEARMIAAEAVARV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66020; Mature: 66020

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRIPLLSGAAALVVVSGTLLAQESLLPPGFDSPATPARPAQQRSTAPAAPRLATPAAR
CEEEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
PSAASAPSSPAATSSPVVQPIPVSSAPPPVQSPLGVSDQALLDSLDPALLAKLIESARPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCC
YDIPPSGQRSLDIVGVIDASDGGLPAGSTHYLNGPFVEGVINKMHGRFVSRWGHILARRA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VASRLATPVGMNGADWAAIRAQLLLRMGEADVARAMVQSVDSGNFTRSLEDAAMASFLAT
HHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ADPVGLCPITALTAASRPGWDWDLVRAICSAFTDEGSPAMAQLDRAMRRGAGSKIDILLA
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEH
QKFAGAATNARRAVKIEWDDVEALTPWSIGMSFATGLEPPEALRAKAGIGYVLLAARAPM
HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCC
LPISSRAAGADEAAARGVMSSEAMIDLYSQIYALREDDGGSSQADEWSRRAETLRTAYVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAASDRLDAIRSLWGDSSDPNKAYAGLVLTSHAAARIAPEEGLSDSAEALIAAMLAAGLD
HHHHHHHHHHHHHHCCCCCCCHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCC
RNALKWAPYLPVGSEGWGLLVLANPGRTNRVGTEGLDAFAGEDDSEGTLRSRFLVAGLMG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
LERVDDAAARDFAKKLGVDFNRQTRWTRAIESAASSNNPALVALLAAFGMQGDRWDKMTP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCH
LHLYHIVSALHRVGLDGEARMIAAEAVARV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKLRIPLLSGAAALVVVSGTLLAQESLLPPGFDSPATPARPAQQRSTAPAAPRLATPAAR
CEEEEEECCCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCC
PSAASAPSSPAATSSPVVQPIPVSSAPPPVQSPLGVSDQALLDSLDPALLAKLIESARPK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCCCC
YDIPPSGQRSLDIVGVIDASDGGLPAGSTHYLNGPFVEGVINKMHGRFVSRWGHILARRA
CCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VASRLATPVGMNGADWAAIRAQLLLRMGEADVARAMVQSVDSGNFTRSLEDAAMASFLAT
HHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ADPVGLCPITALTAASRPGWDWDLVRAICSAFTDEGSPAMAQLDRAMRRGAGSKIDILLA
CCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEH
QKFAGAATNARRAVKIEWDDVEALTPWSIGMSFATGLEPPEALRAKAGIGYVLLAARAPM
HHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCCC
LPISSRAAGADEAAARGVMSSEAMIDLYSQIYALREDDGGSSQADEWSRRAETLRTAYVA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EAASDRLDAIRSLWGDSSDPNKAYAGLVLTSHAAARIAPEEGLSDSAEALIAAMLAAGLD
HHHHHHHHHHHHHHCCCCCCCHHHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHHHHCCC
RNALKWAPYLPVGSEGWGLLVLANPGRTNRVGTEGLDAFAGEDDSEGTLRSRFLVAGLMG
CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHH
LERVDDAAARDFAKKLGVDFNRQTRWTRAIESAASSNNPALVALLAAFGMQGDRWDKMTP
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCH
LHLYHIVSALHRVGLDGEARMIAAEAVARV
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA