| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is gutB [H]
Identifier: 87199891
GI number: 87199891
Start: 1975363
End: 1976370
Strand: Direct
Name: gutB [H]
Synonym: Saro_1874
Alternate gene names: 87199891
Gene position: 1975363-1976370 (Clockwise)
Preceding gene: 87199890
Following gene: 87199892
Centisome position: 55.46
GC content: 66.47
Gene sequence:
>1008_bases ATGCGCGCCGCCGTGATGCAGGGCCTGCACAAGCCGCTGGCCATCGATACGATCCCCGATCCGACGCCGGGCGAGGGTGA TGTCGTGGTCAAGGTCGGGCGCTGCGGCATCTGCGGGTCCGACCTGCACATGACCGAGGACCCGGCATACGGGCAGGGCG CGGGTTCGGTGCTGGGTCACGAGTTTGCGGGCGAAGTCGTTGCGCTGGGCAAGGGCGTGGAGGGCCTCAGGACCGGGGAT CTCGTCTCGGTCATCCCGTTACAAAGTTGCGGTCAATGTCATTCGTGTCGCACGGGCGAAGTGCAGTGGTGCGAGAGGTT CGGTCTTCAGGGTGGCGGCTATGCCGAATTTGCCCTGACGCGGCCGAACCAGTGCGTGCGCCTGCCGGCAAGCGCCAGCA TGGCTGATGGCGCCATCGTCGAACCGCTAGCCGTGGCTCTGCACGGCCTGGCGCTTAGCCGGATGAAGATCGGCGACAAG GTGCTGGTGCTGGGCGCGGGACCGATCGGTCTCGCCGTCGCGTTCTGGGCCCGGCGCTTCGGGGCTGGGCGCGTGGTGGT GCAGGACCTGGCGGAGTGGCAGCGCGACCGCGCTTTGCAGATGGGCGCGCACGATTTCGTCGTCGATGCGGCCGATCCGG TGGGGAGCGCCGGGCGCGCGCTGGGCGGCAAGGCCGATATAGTATTCGAATGCGTGGGCGTGCCGGGACTGATCGCGCAG GCTGTGGAGCAGGTGCGCAATGACGGGACCATCACGCTGCTTGGCCTGTGTACGCGGCCCGATACGTTCAACAGCTTCGC GATGCTGTCCAAGCAGGTGAAGCTGGTGACGTCCGCGTTCTTCACCAGGCAGGAATACGAAGCGGCGCTCGACGCCCTCG TCCGTGGTGCGGTGGAGCCGCGCCTTCTGGTAACCGACACCATTTCGCTCGATGCAACGCCGGACGTGTTCGAGAGCCTG CGCAAGCGCACGCATCAGTGCAAGGTGCTGATAAATCCGGGCGAATGA
Upstream 100 bases:
>100_bases GGCGCTGCTGCTGGCGTCGGACGCTTCGGACTACATGACCGGCAGCCACGTGGTGATCGATGGCGGCATGATGCTCGGCA AGTACAAGTAAGGAAACCCC
Downstream 100 bases:
>100_bases TCGATCCCCGGCAAGCTGGAGCAGGGGCCCATGGGCATTGAAACCTTCGCGGGACGAACCGCATTCGTCACCGGTGGAGC ATCCGGAATAGGCCTGGGCA
Product: GroES-related
Products: NA
Alternate protein names: Glucitol dehydrogenase; L-iditol 2-dehydrogenase [H]
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MRAAVMQGLHKPLAIDTIPDPTPGEGDVVVKVGRCGICGSDLHMTEDPAYGQGAGSVLGHEFAGEVVALGKGVEGLRTGD LVSVIPLQSCGQCHSCRTGEVQWCERFGLQGGGYAEFALTRPNQCVRLPASASMADGAIVEPLAVALHGLALSRMKIGDK VLVLGAGPIGLAVAFWARRFGAGRVVVQDLAEWQRDRALQMGAHDFVVDAADPVGSAGRALGGKADIVFECVGVPGLIAQ AVEQVRNDGTITLLGLCTRPDTFNSFAMLSKQVKLVTSAFFTRQEYEAALDALVRGAVEPRLLVTDTISLDATPDVFESL RKRTHQCKVLINPGE
Sequences:
>Translated_335_residues MRAAVMQGLHKPLAIDTIPDPTPGEGDVVVKVGRCGICGSDLHMTEDPAYGQGAGSVLGHEFAGEVVALGKGVEGLRTGD LVSVIPLQSCGQCHSCRTGEVQWCERFGLQGGGYAEFALTRPNQCVRLPASASMADGAIVEPLAVALHGLALSRMKIGDK VLVLGAGPIGLAVAFWARRFGAGRVVVQDLAEWQRDRALQMGAHDFVVDAADPVGSAGRALGGKADIVFECVGVPGLIAQ AVEQVRNDGTITLLGLCTRPDTFNSFAMLSKQVKLVTSAFFTRQEYEAALDALVRGAVEPRLLVTDTISLDATPDVFESL RKRTHQCKVLINPGE >Mature_335_residues MRAAVMQGLHKPLAIDTIPDPTPGEGDVVVKVGRCGICGSDLHMTEDPAYGQGAGSVLGHEFAGEVVALGKGVEGLRTGD LVSVIPLQSCGQCHSCRTGEVQWCERFGLQGGGYAEFALTRPNQCVRLPASASMADGAIVEPLAVALHGLALSRMKIGDK VLVLGAGPIGLAVAFWARRFGAGRVVVQDLAEWQRDRALQMGAHDFVVDAADPVGSAGRALGGKADIVFECVGVPGLIAQ AVEQVRNDGTITLLGLCTRPDTFNSFAMLSKQVKLVTSAFFTRQEYEAALDALVRGAVEPRLLVTDTISLDATPDVFESL RKRTHQCKVLINPGE
Specific function: Reduces glucitol to fructose [H]
COG id: COG1063
COG function: function code ER; Threonine dehydrogenase and related Zn-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI156627571, Length=329, Percent_Identity=29.1793313069909, Blast_Score=131, Evalue=7e-31, Organism=Homo sapiens, GI262073058, Length=286, Percent_Identity=25.1748251748252, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI71743840, Length=286, Percent_Identity=25.1748251748252, Blast_Score=79, Evalue=8e-15, Organism=Homo sapiens, GI4501933, Length=264, Percent_Identity=25.3787878787879, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI4501929, Length=262, Percent_Identity=24.0458015267176, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI156523966, Length=363, Percent_Identity=21.763085399449, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI4501939, Length=363, Percent_Identity=21.763085399449, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI34577061, Length=264, Percent_Identity=24.2424242424242, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI71565154, Length=274, Percent_Identity=27.007299270073, Blast_Score=73, Evalue=3e-13, Organism=Escherichia coli, GI1787863, Length=337, Percent_Identity=29.3768545994065, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1790045, Length=315, Percent_Identity=28.8888888888889, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1788073, Length=320, Percent_Identity=30.625, Blast_Score=124, Evalue=7e-30, Organism=Escherichia coli, GI226510992, Length=305, Percent_Identity=27.8688524590164, Blast_Score=120, Evalue=1e-28, Organism=Escherichia coli, GI1790718, Length=305, Percent_Identity=28.8524590163934, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI87082125, Length=352, Percent_Identity=26.9886363636364, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788075, Length=329, Percent_Identity=26.4437689969605, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1788407, Length=327, Percent_Identity=27.82874617737, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1786825, Length=401, Percent_Identity=24.1895261845387, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1786552, Length=367, Percent_Identity=28.8828337874659, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI87081918, Length=309, Percent_Identity=25.2427184466019, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1786518, Length=280, Percent_Identity=28.5714285714286, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87082401, Length=329, Percent_Identity=25.8358662613982, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562876, Length=342, Percent_Identity=30.9941520467836, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17562878, Length=330, Percent_Identity=31.5151515151515, Blast_Score=124, Evalue=5e-29, Organism=Caenorhabditis elegans, GI71988145, Length=340, Percent_Identity=28.8235294117647, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17562584, Length=343, Percent_Identity=25.6559766763848, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17562582, Length=337, Percent_Identity=26.1127596439169, Blast_Score=80, Evalue=1e-15, Organism=Caenorhabditis elegans, GI25146526, Length=279, Percent_Identity=27.2401433691756, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71997431, Length=281, Percent_Identity=27.0462633451957, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17565904, Length=221, Percent_Identity=26.6968325791855, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319955, Length=323, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6322619, Length=323, Percent_Identity=29.4117647058824, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6319257, Length=351, Percent_Identity=26.4957264957265, Blast_Score=127, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6323099, Length=328, Percent_Identity=27.7439024390244, Blast_Score=119, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6319258, Length=325, Percent_Identity=25.8461538461538, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6324486, Length=329, Percent_Identity=27.0516717325228, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319621, Length=321, Percent_Identity=27.1028037383178, Blast_Score=89, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6323961, Length=343, Percent_Identity=25.3644314868805, Blast_Score=87, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6323729, Length=321, Percent_Identity=26.791277258567, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320033, Length=275, Percent_Identity=26.9090909090909, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17137530, Length=332, Percent_Identity=28.9156626506024, Blast_Score=133, Evalue=1e-31, Organism=Drosophila melanogaster, GI17737897, Length=334, Percent_Identity=29.0419161676647, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI45551930, Length=338, Percent_Identity=28.698224852071, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI45550770, Length=338, Percent_Identity=28.698224852071, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI221457811, Length=338, Percent_Identity=28.698224852071, Blast_Score=103, Evalue=2e-22, Organism=Drosophila melanogaster, GI17737895, Length=301, Percent_Identity=28.2392026578073, Blast_Score=86, Evalue=5e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.14 [H]
Molecular weight: Translated: 35327; Mature: 35327
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAAVMQGLHKPLAIDTIPDPTPGEGDVVVKVGRCGICGSDLHMTEDPAYGQGAGSVLGH CCCHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH EFAGEVVALGKGVEGLRTGDLVSVIPLQSCGQCHSCRTGEVQWCERFGLQGGGYAEFALT HHCCCEEEECCCCCCCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEE RPNQCVRLPASASMADGAIVEPLAVALHGLALSRMKIGDKVLVLGAGPIGLAVAFWARRF CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHH GAGRVVVQDLAEWQRDRALQMGAHDFVVDAADPVGSAGRALGGKADIVFECVGVPGLIAQ CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHH AVEQVRNDGTITLLGLCTRPDTFNSFAMLSKQVKLVTSAFFTRQEYEAALDALVRGAVEP HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLLVTDTISLDATPDVFESLRKRTHQCKVLINPGE EEEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCC >Mature Secondary Structure MRAAVMQGLHKPLAIDTIPDPTPGEGDVVVKVGRCGICGSDLHMTEDPAYGQGAGSVLGH CCCHHHHHCCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH EFAGEVVALGKGVEGLRTGDLVSVIPLQSCGQCHSCRTGEVQWCERFGLQGGGYAEFALT HHCCCEEEECCCCCCCCCCCEEEEECCHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEE RPNQCVRLPASASMADGAIVEPLAVALHGLALSRMKIGDKVLVLGAGPIGLAVAFWARRF CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCEEEEEECCHHHHHHHHHHHHH GAGRVVVQDLAEWQRDRALQMGAHDFVVDAADPVGSAGRALGGKADIVFECVGVPGLIAQ CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCHHHHH AVEQVRNDGTITLLGLCTRPDTFNSFAMLSKQVKLVTSAFFTRQEYEAALDALVRGAVEP HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RLLVTDTISLDATPDVFESLRKRTHQCKVLINPGE EEEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10086842; 11058132 [H]