| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199842
Identifier: 87199842
GI number: 87199842
Start: 1928289
End: 1928696
Strand: Direct
Name: 87199842
Synonym: Saro_1825
Alternate gene names: NA
Gene position: 1928289-1928696 (Clockwise)
Preceding gene: 87199841
Following gene: 87199843
Centisome position: 54.14
GC content: 63.73
Gene sequence:
>408_bases ATGAAGAGCCCAATGACCGGTGGATGCCTGTGCGGCGCAGTACGTTATGAAGCGAGCGGTCAGCCCGCGATGCAGGGCGT CTGCCATTGCCGCAACTGCCAGAAGCAGGCAGGCACGGCATTCTCGATGATCGTCGGCGTGCCGGAGGCCGCCGTGACAG TCAGCGGAACCCCGGCCACCTACATCGATCATGGCGAAAGCGGAAACGAGGTCCGACGCGAGTTCTGCGCGACATGCGGA TCACCGCTGTTCAGCAAGGTGGCAGCCATGCCGGGCATGGTCTTCATCAAGGCGGGTACGCTTGACGATACCAGCGGCTT TGCGCCCGCGTTCCAGGTGTGGGCGAAGAGCCGGCAGGACTGGATAGACCTTGGCGCGGTGCCTGCGTTCGACACGAATC CGGGCTGA
Upstream 100 bases:
>100_bases CTGAGGCGGCGCTGCCGCCAGACGATCGGTCAGGACTGTCCCCTTGTCCGGGGACAGTCTTGCCGTCATCCTTTGCGAAA GATCGCAGGGAGAGCGGCGG
Downstream 100 bases:
>100_bases TCCGGCAGGCTTCCCAAGCGCCCGGTCGGCTGCCATGGAGGCGGCATGACACCTGCTTCCGATGCCGAACTTGCGATCCG TCTTCGGCGGGCCGAATTCA
Product: glutathione-dependent formaldehyde-activating protein
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating Protein; Glutathione-Dependent Formaldehyde-Activating; Glutathione-Dependent Formaldehyde-Activating Protein GFA; Glutathione-Dependent Formaldehyde-Activating Gfa; Glutathione-Dependent Formaldehyde Activating; Glutathione-Dependent Formaldehyde-Activating Family; Lipoprotein
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MKSPMTGGCLCGAVRYEASGQPAMQGVCHCRNCQKQAGTAFSMIVGVPEAAVTVSGTPATYIDHGESGNEVRREFCATCG SPLFSKVAAMPGMVFIKAGTLDDTSGFAPAFQVWAKSRQDWIDLGAVPAFDTNPG
Sequences:
>Translated_135_residues MKSPMTGGCLCGAVRYEASGQPAMQGVCHCRNCQKQAGTAFSMIVGVPEAAVTVSGTPATYIDHGESGNEVRREFCATCG SPLFSKVAAMPGMVFIKAGTLDDTSGFAPAFQVWAKSRQDWIDLGAVPAFDTNPG >Mature_135_residues MKSPMTGGCLCGAVRYEASGQPAMQGVCHCRNCQKQAGTAFSMIVGVPEAAVTVSGTPATYIDHGESGNEVRREFCATCG SPLFSKVAAMPGMVFIKAGTLDDTSGFAPAFQVWAKSRQDWIDLGAVPAFDTNPG
Specific function: Unknown
COG id: COG3791
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14084; Mature: 14084
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 9.6 %Cys+Met (Translated Protein) 5.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 9.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPMTGGCLCGAVRYEASGQPAMQGVCHCRNCQKQAGTAFSMIVGVPEAAVTVSGTPAT CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCEEEECCCCCE YIDHGESGNEVRREFCATCGSPLFSKVAAMPGMVFIKAGTLDDTSGFAPAFQVWAKSRQD EECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCC WIDLGAVPAFDTNPG HHHCCCCCCCCCCCC >Mature Secondary Structure MKSPMTGGCLCGAVRYEASGQPAMQGVCHCRNCQKQAGTAFSMIVGVPEAAVTVSGTPAT CCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHEEECCCCEEEECCCCCE YIDHGESGNEVRREFCATCGSPLFSKVAAMPGMVFIKAGTLDDTSGFAPAFQVWAKSRQD EECCCCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHCCCC WIDLGAVPAFDTNPG HHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA