Click here to switch to the map view.

The map label for this gene is nylB [H]

Identifier: 87199810

GI number: 87199810

Start: 1890515

End: 1891741

Strand: Direct

Name: nylB [H]

Synonym: Saro_1793

Alternate gene names: 87199810

Gene position: 1890515-1891741 (Clockwise)

Preceding gene: 87199809

Following gene: 87199811

Centisome position: 53.08

GC content: 66.42

Gene sequence:

>1227_bases
ATGGCAGGCGAACTGCTCGACGGGCTGACGAGCGATCCGGTGCGTATGGGCTGGATGCAGGGCTCGCCGCCGCCGCCGGA
AAAGGTCCTGCTTGCCGCTCGCGCGGATCACATGCGCTTTCCGATGATCCGTTGGTCATATTCCAACATGCGCCAGTTCG
TGCCCACGCGCCGCGTCGCCGCTTCGGGCGAGGGACGGCCGTTCGAGCGCGCCTTGCGTCCCGATCTCGCGGACGTCTCG
TTCGTGCCGCTCGGCGGCGATGATCCGGTCGCATTCGGACAATCGCTGGCCGAGGCCTTTACTGATGGCATCCTTGTCCT
TCACCGCGGCAAGGTCGTGCTCGAACGCTGGCTCGGCGTGACCGGACCCCAGACCCGCCACATTGCCTTTTCCGTGACCA
AGAGCTTCGTCGGCACAATTGTAGAAATGCTGGCGGATGAAGGGCGCATCGATCCGGCGGCAATGATTTCCGCCTACCTG
CCCGAAATGGCCGGCAGCGGCTTTGCCGACGCGACGGTGCGGCAGGTGCTCGACATGACCACCGCGCTCGATTTCTCCGA
GGACTACGCCGATCCCGAATCCGGCATCGGCGCCTACAGCGCAGCGCTCGGCCTGACCCCGCGCAAGCCCGACTACGCGG
GGCCGGCCGACTTGTGGAGTTTCCTGCCGTCGGTGGCGAAGTCGGGCGATCATGGCCGTGGCTTCACCTACCGCACGCCC
AATACCGACGTTCTTGCGTGGCTGGTCAGCCGGGTAGAGGGCCGGCACTTCGCCGATGTCCTGACCGAGCGTTTGTGGCA
GCCGCTCGGAATGCTGGGTGATGCCGACCTGATCGTTGACCAGGCGGGCTCGCCCTTTGCCGGCGGCGGCCTCAACCTCC
GTCTGGAAGACCTTGCCCGCTTTGGCGAGGCCATGCGTCTGGGTGGCCTTGGCGTCATTCCCGCCGGCGTCGTCGCGCGC
ATCGCCAGCGGCGGCGATCCAGCGCATTTCGACCGCACCCGCTACCCGCAACTTCCGGGGTGGAGCTATGGCAGCCAGTG
GTGGATCAGCAACAATGCCCATGGATGCTTCTCCGCACGGGGCATCCACGGGCAGACGCTCTGGGTCGACCCGGCGGCTG
AAATGACCATCGCTCGATTCGCGTCGCATCCCACTGCCGCCAACGGCGCGAACGACCCGCTATCCCTGCCTGCGTGGGCC
GCACTGGCCGATGCTCTAAGTCGCTGA

Upstream 100 bases:

>100_bases
GACGATCTGGAGAAGGTGCGCACCTTCTCCTACGAGGACTTCCGCGACCGCCTTTCCTGATGCATCCTCCCGCCAACGAC
AATCGAGGCGGGAGAATGGC

Downstream 100 bases:

>100_bases
TAAATAGCGATCTGTCTGGAATTGTTCCGCTTTTTTGCCAGGCCGTTGCGGCGGGGTCCTTTTTCACTTGAGATTCATCG
CAACGGCCTTATTTACCCCC

Product: 6-aminohexanoate-dimer hydrolase

Products: NA

Alternate protein names: Nylon oligomers-degrading enzyme EII [H]

Number of amino acids: Translated: 408; Mature: 407

Protein sequence:

>408_residues
MAGELLDGLTSDPVRMGWMQGSPPPPEKVLLAARADHMRFPMIRWSYSNMRQFVPTRRVAASGEGRPFERALRPDLADVS
FVPLGGDDPVAFGQSLAEAFTDGILVLHRGKVVLERWLGVTGPQTRHIAFSVTKSFVGTIVEMLADEGRIDPAAMISAYL
PEMAGSGFADATVRQVLDMTTALDFSEDYADPESGIGAYSAALGLTPRKPDYAGPADLWSFLPSVAKSGDHGRGFTYRTP
NTDVLAWLVSRVEGRHFADVLTERLWQPLGMLGDADLIVDQAGSPFAGGGLNLRLEDLARFGEAMRLGGLGVIPAGVVAR
IASGGDPAHFDRTRYPQLPGWSYGSQWWISNNAHGCFSARGIHGQTLWVDPAAEMTIARFASHPTAANGANDPLSLPAWA
ALADALSR

Sequences:

>Translated_408_residues
MAGELLDGLTSDPVRMGWMQGSPPPPEKVLLAARADHMRFPMIRWSYSNMRQFVPTRRVAASGEGRPFERALRPDLADVS
FVPLGGDDPVAFGQSLAEAFTDGILVLHRGKVVLERWLGVTGPQTRHIAFSVTKSFVGTIVEMLADEGRIDPAAMISAYL
PEMAGSGFADATVRQVLDMTTALDFSEDYADPESGIGAYSAALGLTPRKPDYAGPADLWSFLPSVAKSGDHGRGFTYRTP
NTDVLAWLVSRVEGRHFADVLTERLWQPLGMLGDADLIVDQAGSPFAGGGLNLRLEDLARFGEAMRLGGLGVIPAGVVAR
IASGGDPAHFDRTRYPQLPGWSYGSQWWISNNAHGCFSARGIHGQTLWVDPAAEMTIARFASHPTAANGANDPLSLPAWA
ALADALSR
>Mature_407_residues
AGELLDGLTSDPVRMGWMQGSPPPPEKVLLAARADHMRFPMIRWSYSNMRQFVPTRRVAASGEGRPFERALRPDLADVSF
VPLGGDDPVAFGQSLAEAFTDGILVLHRGKVVLERWLGVTGPQTRHIAFSVTKSFVGTIVEMLADEGRIDPAAMISAYLP
EMAGSGFADATVRQVLDMTTALDFSEDYADPESGIGAYSAALGLTPRKPDYAGPADLWSFLPSVAKSGDHGRGFTYRTPN
TDVLAWLVSRVEGRHFADVLTERLWQPLGMLGDADLIVDQAGSPFAGGGLNLRLEDLARFGEAMRLGGLGVIPAGVVARI
ASGGDPAHFDRTRYPQLPGWSYGSQWWISNNAHGCFSARGIHGQTLWVDPAAEMTIARFASHPTAANGANDPLSLPAWAA
LADALSR

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: =3.5.1.46 [H]

Molecular weight: Translated: 43841; Mature: 43710

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGELLDGLTSDPVRMGWMQGSPPPPEKVLLAARADHMRFPMIRWSYSNMRQFVPTRRVA
CCCCHHCCCCCCCHHCCCCCCCCCCHHHEEEEHHHCCCCCCEEEECHHHHHHHCCHHHHH
ASGEGRPFERALRPDLADVSFVPLGGDDPVAFGQSLAEAFTDGILVLHRGKVVLERWLGV
CCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCC
TGPQTRHIAFSVTKSFVGTIVEMLADEGRIDPAAMISAYLPEMAGSGFADATVRQVLDMT
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TALDFSEDYADPESGIGAYSAALGLTPRKPDYAGPADLWSFLPSVAKSGDHGRGFTYRTP
HHHCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC
NTDVLAWLVSRVEGRHFADVLTERLWQPLGMLGDADLIVDQAGSPFAGGGLNLRLEDLAR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCCEEHHHHHH
FGEAMRLGGLGVIPAGVVARIASGGDPAHFDRTRYPQLPGWSYGSQWWISNNAHGCFSAR
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEC
GIHGQTLWVDPAAEMTIARFASHPTAANGANDPLSLPAWAALADALSR
CCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AGELLDGLTSDPVRMGWMQGSPPPPEKVLLAARADHMRFPMIRWSYSNMRQFVPTRRVA
CCCHHCCCCCCCHHCCCCCCCCCCHHHEEEEHHHCCCCCCEEEECHHHHHHHCCHHHHH
ASGEGRPFERALRPDLADVSFVPLGGDDPVAFGQSLAEAFTDGILVLHRGKVVLERWLGV
CCCCCCCHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEECCHHHHHHHHCC
TGPQTRHIAFSVTKSFVGTIVEMLADEGRIDPAAMISAYLPEMAGSGFADATVRQVLDMT
CCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
TALDFSEDYADPESGIGAYSAALGLTPRKPDYAGPADLWSFLPSVAKSGDHGRGFTYRTP
HHHCCHHHCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECC
NTDVLAWLVSRVEGRHFADVLTERLWQPLGMLGDADLIVDQAGSPFAGGGLNLRLEDLAR
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCCCCCCCCEEHHHHHH
FGEAMRLGGLGVIPAGVVARIASGGDPAHFDRTRYPQLPGWSYGSQWWISNNAHGCFSAR
HHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEC
GIHGQTLWVDPAAEMTIARFASHPTAANGANDPLSLPAWAALADALSR
CCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6646204; 6389532; 2512123 [H]