| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199723
Identifier: 87199723
GI number: 87199723
Start: 1791549
End: 1792616
Strand: Direct
Name: 87199723
Synonym: Saro_1706
Alternate gene names: NA
Gene position: 1791549-1792616 (Clockwise)
Preceding gene: 87199722
Following gene: 87199724
Centisome position: 50.3
GC content: 66.67
Gene sequence:
>1068_bases ATGAGCGCCGCAGCGCAGGACGCCAATGCCGGCACCACCCCGGTGCGCGAGGGCTATCGCTTCGATGAAGCGGCGCTGGC GCGGTGGATGGAAGCCGAGGTCGAGGGCTTTTCCGGTCCGCTGACCGTCGAGCAGTTCAAGGGCGGGCAATCCAACCCGA CCTACAAGCTGGTGACGCCGGGGCGCAGCTATGTGCTGCGCCGCAAGCCGCCGGGGCCGGTGCTGAAGGGCGCCCACGCT GTGGAACGCGAGGCGCAGGTGCTTTCCGCGCTGGGTTCGGTGGGGTTTCCGGTCGCGCACGTGCATGGGCTGTGCACCGA CGAGAGCGTGATCGGGAGCTGGTTCTACGTGATGGAAATGGTGGAGGGGCGCATCTTCTGGGATGCGACTTTCCCCGAGG TGAGCCGCGAGGAGCGGCCTGCCTATTTCGACGCCATGAACGCCACGATCGCGCAGCTGCATTCCATCGACCACGTGGCG GTGGGTCTGGCTGACTACGGCAAGCCGGGCAACTACTTCGCACGGCAGGTCGGGCGCTGGTCGAGGCAGTATCTCGAGGA TGAGCTGGCCGGGCGCGATCCCAACATGGACGCGCTGGTCGAATGGCTGCCGACGGCCATTCCCGAAGGCGACGAGACAA GCGTCGTCCACGGGGACTTCCGCTGCGACAACATGATCTTTCATCCCACCGAGCCGCGTGTGATCGCGGTGCTGGACTGG GAGCTTTCGACGCTGGGTCACCCGCTGGCGGACTTTGCCTACCACGCGATGATGTACCACATGCCGCCGAATATCGTGGC GGGGCTCGAGGGCGCGGACCTTGCCACGCTGAACATCCCGTCAGAGGCGGAATACGTCGCGGCCTATTGCCGCAGGACCG GGCGCGAGGGCATTGCCTCGTGGGACTTCTACATGGCGTTCAACTTCTTCCGGCTGGCCGCGATCTTCCACGGAATCAAG GGGCGCTACCTGCGCGGGACCGCCGCTTCGGCCCACGCCAAGGCTCGGGCCGAGGCGTTTCCCGTGCTCGCAAGACTGGC CCGCGAGGCGATGGAGCGGTGCCGCTGA
Upstream 100 bases:
>100_bases TCCGCGAAGTGCGTGCGTTCCGCATCTATGACGGCCCGACCGAGGTCCACAAGTGGAGCCTTGCAAAGAAGATCCGTCGC GAATGGCGCGAGGCGACGGC
Downstream 100 bases:
>100_bases ATTAGCGGGGGCGGCAATTCGTTCCGGTTCGGAACGTTAACGCCGCTGACAGGCAGGACCGAACGCGGACGCCGAATCGC GTTTCGAACGGTTTAGGGGC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-CoA Dehydrogenase; Phosphotransferase Family; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Tyrosine Protein Kinase/Aminoglycoside Phosphotransferase; Acyl-CoA Dehydrogenase Family Member; Acyl-CoA Dehydrogenase Domain-Containing Protein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MSAAAQDANAGTTPVREGYRFDEAALARWMEAEVEGFSGPLTVEQFKGGQSNPTYKLVTPGRSYVLRRKPPGPVLKGAHA VEREAQVLSALGSVGFPVAHVHGLCTDESVIGSWFYVMEMVEGRIFWDATFPEVSREERPAYFDAMNATIAQLHSIDHVA VGLADYGKPGNYFARQVGRWSRQYLEDELAGRDPNMDALVEWLPTAIPEGDETSVVHGDFRCDNMIFHPTEPRVIAVLDW ELSTLGHPLADFAYHAMMYHMPPNIVAGLEGADLATLNIPSEAEYVAAYCRRTGREGIASWDFYMAFNFFRLAAIFHGIK GRYLRGTAASAHAKARAEAFPVLARLAREAMERCR
Sequences:
>Translated_355_residues MSAAAQDANAGTTPVREGYRFDEAALARWMEAEVEGFSGPLTVEQFKGGQSNPTYKLVTPGRSYVLRRKPPGPVLKGAHA VEREAQVLSALGSVGFPVAHVHGLCTDESVIGSWFYVMEMVEGRIFWDATFPEVSREERPAYFDAMNATIAQLHSIDHVA VGLADYGKPGNYFARQVGRWSRQYLEDELAGRDPNMDALVEWLPTAIPEGDETSVVHGDFRCDNMIFHPTEPRVIAVLDW ELSTLGHPLADFAYHAMMYHMPPNIVAGLEGADLATLNIPSEAEYVAAYCRRTGREGIASWDFYMAFNFFRLAAIFHGIK GRYLRGTAASAHAKARAEAFPVLARLAREAMERCR >Mature_354_residues SAAAQDANAGTTPVREGYRFDEAALARWMEAEVEGFSGPLTVEQFKGGQSNPTYKLVTPGRSYVLRRKPPGPVLKGAHAV EREAQVLSALGSVGFPVAHVHGLCTDESVIGSWFYVMEMVEGRIFWDATFPEVSREERPAYFDAMNATIAQLHSIDHVAV GLADYGKPGNYFARQVGRWSRQYLEDELAGRDPNMDALVEWLPTAIPEGDETSVVHGDFRCDNMIFHPTEPRVIAVLDWE LSTLGHPLADFAYHAMMYHMPPNIVAGLEGADLATLNIPSEAEYVAAYCRRTGREGIASWDFYMAFNFFRLAAIFHGIKG RYLRGTAASAHAKARAEAFPVLARLAREAMERCR
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=341, Percent_Identity=44.8680351906158, Blast_Score=307, Evalue=1e-83, Organism=Homo sapiens, GI211971008, Length=341, Percent_Identity=44.8680351906158, Blast_Score=307, Evalue=1e-83, Organism=Homo sapiens, GI38505218, Length=342, Percent_Identity=41.812865497076, Blast_Score=271, Evalue=8e-73, Organism=Caenorhabditis elegans, GI17562446, Length=322, Percent_Identity=37.2670807453416, Blast_Score=212, Evalue=3e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39349; Mature: 39218
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: PS00109 PROTEIN_KINASE_TYR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAQDANAGTTPVREGYRFDEAALARWMEAEVEGFSGPLTVEQFKGGQSNPTYKLVTP CCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCEEEECC GRSYVLRRKPPGPVLKGAHAVEREAQVLSALGSVGFPVAHVHGLCTDESVIGSWFYVMEM CCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH VEGRIFWDATFPEVSREERPAYFDAMNATIAQLHSIDHVAVGLADYGKPGNYFARQVGRW HCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHH SRQYLEDELAGRDPNMDALVEWLPTAIPEGDETSVVHGDFRCDNMIFHPTEPRVIAVLDW HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEEC ELSTLGHPLADFAYHAMMYHMPPNIVAGLEGADLATLNIPSEAEYVAAYCRRTGREGIAS CHHHHCCHHHHHHHHHHHHCCCCHHEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC WDFYMAFNFFRLAAIFHGIKGRYLRGTAASAHAKARAEAFPVLARLAREAMERCR HHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SAAAQDANAGTTPVREGYRFDEAALARWMEAEVEGFSGPLTVEQFKGGQSNPTYKLVTP CCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCEEEECC GRSYVLRRKPPGPVLKGAHAVEREAQVLSALGSVGFPVAHVHGLCTDESVIGSWFYVMEM CCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHH VEGRIFWDATFPEVSREERPAYFDAMNATIAQLHSIDHVAVGLADYGKPGNYFARQVGRW HCCEEEEECCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHH SRQYLEDELAGRDPNMDALVEWLPTAIPEGDETSVVHGDFRCDNMIFHPTEPRVIAVLDW HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEECCCCCCEEEEEEC ELSTLGHPLADFAYHAMMYHMPPNIVAGLEGADLATLNIPSEAEYVAAYCRRTGREGIAS CHHHHCCHHHHHHHHHHHHCCCCHHEECCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCC WDFYMAFNFFRLAAIFHGIKGRYLRGTAASAHAKARAEAFPVLARLAREAMERCR HHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA