| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mauD [H]
Identifier: 87199704
GI number: 87199704
Start: 1771093
End: 1771683
Strand: Direct
Name: mauD [H]
Synonym: Saro_1687
Alternate gene names: 87199704
Gene position: 1771093-1771683 (Clockwise)
Preceding gene: 87199703
Following gene: 87199705
Centisome position: 49.73
GC content: 66.33
Gene sequence:
>591_bases ATGCTGACGTCCCAGATCCTGTTGTGGACCGCCGTTATCGTCGAGGGCCTGCTGATCGCGGCGCTTGCCCGTCAGGTCGG CATTCTCCACGAACGCATTGCCCCGGCAGGGGCCCTGACACTGCACCAGAATGTGAAGATCGGCGAGACCGCCAGCCCGA TGACGGTCACCACCATCGAGGGCGCCCCGGTCGAGATCGGTGGCAAGCGGGACGGGCGCAGCCAGCTTCTGTTCTTCGCC TCGCCCGACTGCCCGGTGTGCAAGTCGCTGCTCCCCGTGGTCCGTTCTGCGGCAACCGCCGAGGCCGACTGGCTGGACAT CGTGATCGCTGGCGACGGTTCCAAGGCGGAGTACCAGCGCCTGCGTGACCTGAACGGCCTCGAAAATGTTCCGACCGTCC TTTCCGAAGCCCTTGGCCGCGCCTTCGGCGTCTCGAAGCTGCCCTACGCGGTCCTGCTCGACGAAGCCGGGCGCGTTGCT TCGCTCGGCCTCGTCAACAGCCGCGAACACCTTGAAAGCCTTTTCGAGGCCAAGGAGCGGGGCGTGGCCTCGATCCAGGA TTTCCTCGCCCGCCGCCAGAAGGAGGCCTGA
Upstream 100 bases:
>100_bases TCGGGCTCGACGCTCCGTTCGCCGCCGCCGGACTTCTTGCGCTCTATCTGGGCGCTTCGGAAATCCTTGCCATTCCCCAT CCTCGCTGGAGGAAGTCGTG
Downstream 100 bases:
>100_bases CCCATGGCCGGTTTCGACAAGTGGACTGAACGCCTTGCCCGCGGCGTCGCCCGCCGCAGTTCTCGCCGCAGCACGCTAGC CTGGCTGGGCGCCGCGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLTSQILLWTAVIVEGLLIAALARQVGILHERIAPAGALTLHQNVKIGETASPMTVTTIEGAPVEIGGKRDGRSQLLFFA SPDCPVCKSLLPVVRSAATAEADWLDIVIAGDGSKAEYQRLRDLNGLENVPTVLSEALGRAFGVSKLPYAVLLDEAGRVA SLGLVNSREHLESLFEAKERGVASIQDFLARRQKEA
Sequences:
>Translated_196_residues MLTSQILLWTAVIVEGLLIAALARQVGILHERIAPAGALTLHQNVKIGETASPMTVTTIEGAPVEIGGKRDGRSQLLFFA SPDCPVCKSLLPVVRSAATAEADWLDIVIAGDGSKAEYQRLRDLNGLENVPTVLSEALGRAFGVSKLPYAVLLDEAGRVA SLGLVNSREHLESLFEAKERGVASIQDFLARRQKEA >Mature_196_residues MLTSQILLWTAVIVEGLLIAALARQVGILHERIAPAGALTLHQNVKIGETASPMTVTTIEGAPVEIGGKRDGRSQLLFFA SPDCPVCKSLLPVVRSAATAEADWLDIVIAGDGSKAEYQRLRDLNGLENVPTVLSEALGRAFGVSKLPYAVLLDEAGRVA SLGLVNSREHLESLFEAKERGVASIQDFLARRQKEA
Specific function: May be specifically involved in the processing, transport, and/or maturation of the MADH beta-subunit [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR013478 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 20965; Mature: 20965
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTSQILLWTAVIVEGLLIAALARQVGILHERIAPAGALTLHQNVKIGETASPMTVTTIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEC GAPVEIGGKRDGRSQLLFFASPDCPVCKSLLPVVRSAATAEADWLDIVIAGDGSKAEYQR CCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH LRDLNGLENVPTVLSEALGRAFGVSKLPYAVLLDEAGRVASLGLVNSREHLESLFEAKER HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECCCCCCHHHHHHHHHHHHC GVASIQDFLARRQKEA CHHHHHHHHHHHHCCC >Mature Secondary Structure MLTSQILLWTAVIVEGLLIAALARQVGILHERIAPAGALTLHQNVKIGETASPMTVTTIE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEC GAPVEIGGKRDGRSQLLFFASPDCPVCKSLLPVVRSAATAEADWLDIVIAGDGSKAEYQR CCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHH LRDLNGLENVPTVLSEALGRAFGVSKLPYAVLLDEAGRVASLGLVNSREHLESLFEAKER HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHEEECCCCCEEECCCCCCHHHHHHHHHHHHC GVASIQDFLARRQKEA CHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9403107; 1590782 [H]