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The map label for this gene is bkdR [H]

Identifier: 87199700

GI number: 87199700

Start: 1768151

End: 1768621

Strand: Direct

Name: bkdR [H]

Synonym: Saro_1683

Alternate gene names: 87199700

Gene position: 1768151-1768621 (Clockwise)

Preceding gene: 87199698

Following gene: 87199702

Centisome position: 49.65

GC content: 63.48

Gene sequence:

>471_bases
ATGGATCGTGCTGACCTCGCTCTGCTTGAAGCGATCCAGGCCGACTCGGCGCTGTCCATCTCCGACCTCGCCGAAAAGGT
CTCGCTCTCTCCTTCGGCGTGTCATCGCCGCATCAAGGCTCTGGAACAGTCAGGCGTGATCGCCAGCTATGGCGCCCGCC
TCGAGCCGCGGCTGCTGGGCCTTACGGTGGAAGTCTTTGTCGAGATCACGCTCACCAGCCAGAGTCGCGAGGTGATGGAC
AGGTTCGAGCGTGCGGTGGGGGACTTCGACGACATTCTCGAATGCCACCTCATGTCGGGCGCGGCGGACTATCTCCTGCG
CGTGGCTGCCTGCGATCTCGATCAGTACGACCGCATTCACCGCGATTGCCTGGCGCGGTTGCCGGGCGTGTCCGCCATGC
GCTCCAGTTTCTCGCTACGGCGCATCAAGAAGATGCAGGGCTATCCCGTCAGGCGGTTGCCAACCCCCTGA

Upstream 100 bases:

>100_bases
TATCGCGATGGTCCCGGCAGTTCTTGCCTATTTGCAGCCTTGCGATGTGGCTGTTTGGTGATATTTTTCGGATTTCACCG
CATAATCGGGAAGAATTTTC

Downstream 100 bases:

>100_bases
TCTGTTCGGAAGTGATCGTCTTCACCAGGTTGCAGAAGGCATGGACCGCCACTCGCTCGATCTGCGGCATGCGCGGTTCG
AACGGCTTTTCGTGGCCCGC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDRADLALLEAIQADSALSISDLAEKVSLSPSACHRRIKALEQSGVIASYGARLEPRLLGLTVEVFVEITLTSQSREVMD
RFERAVGDFDDILECHLMSGAADYLLRVAACDLDQYDRIHRDCLARLPGVSAMRSSFSLRRIKKMQGYPVRRLPTP

Sequences:

>Translated_156_residues
MDRADLALLEAIQADSALSISDLAEKVSLSPSACHRRIKALEQSGVIASYGARLEPRLLGLTVEVFVEITLTSQSREVMD
RFERAVGDFDDILECHLMSGAADYLLRVAACDLDQYDRIHRDCLARLPGVSAMRSSFSLRRIKKMQGYPVRRLPTP
>Mature_156_residues
MDRADLALLEAIQADSALSISDLAEKVSLSPSACHRRIKALEQSGVIASYGARLEPRLLGLTVEVFVEITLTSQSREVMD
RFERAVGDFDDILECHLMSGAADYLLRVAACDLDQYDRIHRDCLARLPGVSAMRSSFSLRRIKKMQGYPVRRLPTP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=144, Percent_Identity=38.1944444444444, Blast_Score=110, Evalue=4e-26,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=34.6666666666667, Blast_Score=100, Evalue=6e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17380; Mature: 17380

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRADLALLEAIQADSALSISDLAEKVSLSPSACHRRIKALEQSGVIASYGARLEPRLLG
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHH
LTVEVFVEITLTSQSREVMDRFERAVGDFDDILECHLMSGAADYLLRVAACDLDQYDRIH
EEEHHHEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RDCLARLPGVSAMRSSFSLRRIKKMQGYPVRRLPTP
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDRADLALLEAIQADSALSISDLAEKVSLSPSACHRRIKALEQSGVIASYGARLEPRLLG
CCHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHCCCCCCHHHHH
LTVEVFVEITLTSQSREVMDRFERAVGDFDDILECHLMSGAADYLLRVAACDLDQYDRIH
EEEHHHEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
RDCLARLPGVSAMRSSFSLRRIKKMQGYPVRRLPTP
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8320210 [H]