| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is qor [H]
Identifier: 87199684
GI number: 87199684
Start: 1747042
End: 1748031
Strand: Direct
Name: qor [H]
Synonym: Saro_1667
Alternate gene names: 87199684
Gene position: 1747042-1748031 (Clockwise)
Preceding gene: 87199682
Following gene: 87199685
Centisome position: 49.05
GC content: 67.58
Gene sequence:
>990_bases ATGACGACCATGTGTGCGCTCCAGGTGCGGGCGTTGAGCGAAGATCTGGGCGGGCTCGCTCTTGTCGATCTGCCAATGCC TGTGCCTTCAGCAGGCGAGGCGCTGGTGCGGATCGAGGCCGCTGCGCTCGGCTTTCCCGATCTCCTGATGACGAAGGGGC GCTACCAGGCCCGGCCGCCACTGCCGTTCGTGCCTGGTATGGAAGGCGCGGGCGTCGTGGTCGAAGCAGGCGAGGGGTGT CAGTTCAAGCCGGGCGACGAAGTCATCGTGGGCGGTCTGACCGGCGGCGTGGCGCAATACGGCTGTTTCGCCAGCGGCGC GATGATGCCCAAGCCCGCAAGTCTGGACATGGGCCAGGCCGCTTCGCTGCGTGCTGCATACCTCACGGCATGGGTGGCGC TCGTGCGCAGGGGTATGGCCCAGCCGGGCGAGACCTTGCTGGTCCACGGGGCAGCGGGAGGCGTGGGGCTGGCAGCGGTG GACCTTGGCAAGGCGCTCGGCCTGCGGGTGATCGCGGCCGCATCCAGCGACGAGAAGCGCGCGGCGATACAGCAACTCTA TGCACCGGATCACGTGATCGACAGTGCGCCGGGATTTCGCGACCGTGTGCTGGCGATCACCGAGGGGCGCGGCGCGGACC TCGTCTACGACCCGGTCGGGGGCGACGTGTTCGACGAATCCACGCGCTGCATCGCCTTCGACGGGCGCCTGCTAGTCATC GGTTTTGCCGGAGGGCGCATTCCGCAGATCGGGGTCAACATCGCGCTGATCAAGGGGTTTTCGGTGGTTGGTGTCAGGGC TGGCGAATACGGCCGCCGCTTCCCGGAGCGGGGGGCGGAGAACCTGGCGCAGGTCCAGCGGCTGGCAAGCGATGGTCGGA TCCGGCCGCATGTCCATGCGCGGTACGCGCTTGCGGACTGGAAGCAGGCCTTTGCCGGAATGGAATCGCGTTCCGTGATC GGGCGAAGCGTGATTCTCCCGCACGGATGA
Upstream 100 bases:
>100_bases CGCAACGCAGCATTGCGGCGTCCGTCGTGGAGCGATTTGTCACGTTCAGCCACCTTGGTCGGGCGCCGGGTTTGCGCCAC AACTTGGCGGGGAGAACGAA
Downstream 100 bases:
>100_bases AGCGCAAAAAAATGGGCCGCACCGTTGCCGGGCGGCCCTGAAAAGTTTGGGAGAGGATGCCTGAAAGGCCCGTCCCAAAT GGTCCCCACGCCGGTTTTGC
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NADPH:quinone reductase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGC QFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAV DLGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVI GRSVILPHG
Sequences:
>Translated_329_residues MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGC QFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAV DLGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVI GRSVILPHG >Mature_328_residues TTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGCQ FKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVD LGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVIG FAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVIG RSVILPHG
Specific function: Unknown
COG id: COG0604
COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI22538446, Length=321, Percent_Identity=29.2834890965732, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI22538444, Length=321, Percent_Identity=29.2834890965732, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI194239674, Length=294, Percent_Identity=26.530612244898, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI13236495, Length=294, Percent_Identity=26.530612244898, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI18379349, Length=309, Percent_Identity=29.126213592233, Blast_Score=120, Evalue=2e-27, Organism=Homo sapiens, GI194239676, Length=165, Percent_Identity=33.9393939393939, Blast_Score=108, Evalue=5e-24, Organism=Homo sapiens, GI41872631, Length=303, Percent_Identity=30.3630363036304, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI28557745, Length=225, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI24308257, Length=332, Percent_Identity=25.9036144578313, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI47519420, Length=341, Percent_Identity=27.5659824046921, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI67078404, Length=289, Percent_Identity=25.6055363321799, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI67078406, Length=285, Percent_Identity=25.6140350877193, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1790485, Length=315, Percent_Identity=28.8888888888889, Blast_Score=96, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17556000, Length=328, Percent_Identity=27.4390243902439, Blast_Score=91, Evalue=9e-19, Organism=Caenorhabditis elegans, GI17507255, Length=221, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=8e-16, Organism=Caenorhabditis elegans, GI71988145, Length=189, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212642053, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6319520, Length=333, Percent_Identity=29.4294294294294, Blast_Score=107, Evalue=3e-24, Organism=Saccharomyces cerevisiae, GI6319621, Length=346, Percent_Identity=26.0115606936416, Blast_Score=79, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6324486, Length=287, Percent_Identity=26.1324041811847, Blast_Score=73, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6323961, Length=292, Percent_Identity=25.3424657534247, Blast_Score=68, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323729, Length=202, Percent_Identity=26.7326732673267, Blast_Score=63, Evalue=6e-11, Organism=Drosophila melanogaster, GI24581345, Length=326, Percent_Identity=26.3803680981595, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI19920632, Length=298, Percent_Identity=28.1879194630872, Blast_Score=86, Evalue=4e-17, Organism=Drosophila melanogaster, GI221330659, Length=298, Percent_Identity=28.1879194630872, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.6.5.5 [H]
Molecular weight: Translated: 34267; Mature: 34136
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPP CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCC LPFVPGMEGAGVVVEAGEGCQFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQA CCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCH ASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVDLGKALGLRVIAAASSDEKR HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHCEEEEEECCCCHHH AAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI HHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCEEEEE GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHA EECCCCCCCCCCEEEEEECCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE RYALADWKQAFAGMESRSVIGRSVILPHG EHHHHHHHHHHCCCCHHHHCCCEEECCCC >Mature Secondary Structure TTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPP CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCC LPFVPGMEGAGVVVEAGEGCQFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQA CCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCH ASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVDLGKALGLRVIAAASSDEKR HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHCEEEEEECCCCHHH AAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI HHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCEEEEE GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHA EECCCCCCCCCCEEEEEECCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE RYALADWKQAFAGMESRSVIGRSVILPHG EHHHHHHHHHHCCCCHHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]