Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is qor [H]

Identifier: 87199684

GI number: 87199684

Start: 1747042

End: 1748031

Strand: Direct

Name: qor [H]

Synonym: Saro_1667

Alternate gene names: 87199684

Gene position: 1747042-1748031 (Clockwise)

Preceding gene: 87199682

Following gene: 87199685

Centisome position: 49.05

GC content: 67.58

Gene sequence:

>990_bases
ATGACGACCATGTGTGCGCTCCAGGTGCGGGCGTTGAGCGAAGATCTGGGCGGGCTCGCTCTTGTCGATCTGCCAATGCC
TGTGCCTTCAGCAGGCGAGGCGCTGGTGCGGATCGAGGCCGCTGCGCTCGGCTTTCCCGATCTCCTGATGACGAAGGGGC
GCTACCAGGCCCGGCCGCCACTGCCGTTCGTGCCTGGTATGGAAGGCGCGGGCGTCGTGGTCGAAGCAGGCGAGGGGTGT
CAGTTCAAGCCGGGCGACGAAGTCATCGTGGGCGGTCTGACCGGCGGCGTGGCGCAATACGGCTGTTTCGCCAGCGGCGC
GATGATGCCCAAGCCCGCAAGTCTGGACATGGGCCAGGCCGCTTCGCTGCGTGCTGCATACCTCACGGCATGGGTGGCGC
TCGTGCGCAGGGGTATGGCCCAGCCGGGCGAGACCTTGCTGGTCCACGGGGCAGCGGGAGGCGTGGGGCTGGCAGCGGTG
GACCTTGGCAAGGCGCTCGGCCTGCGGGTGATCGCGGCCGCATCCAGCGACGAGAAGCGCGCGGCGATACAGCAACTCTA
TGCACCGGATCACGTGATCGACAGTGCGCCGGGATTTCGCGACCGTGTGCTGGCGATCACCGAGGGGCGCGGCGCGGACC
TCGTCTACGACCCGGTCGGGGGCGACGTGTTCGACGAATCCACGCGCTGCATCGCCTTCGACGGGCGCCTGCTAGTCATC
GGTTTTGCCGGAGGGCGCATTCCGCAGATCGGGGTCAACATCGCGCTGATCAAGGGGTTTTCGGTGGTTGGTGTCAGGGC
TGGCGAATACGGCCGCCGCTTCCCGGAGCGGGGGGCGGAGAACCTGGCGCAGGTCCAGCGGCTGGCAAGCGATGGTCGGA
TCCGGCCGCATGTCCATGCGCGGTACGCGCTTGCGGACTGGAAGCAGGCCTTTGCCGGAATGGAATCGCGTTCCGTGATC
GGGCGAAGCGTGATTCTCCCGCACGGATGA

Upstream 100 bases:

>100_bases
CGCAACGCAGCATTGCGGCGTCCGTCGTGGAGCGATTTGTCACGTTCAGCCACCTTGGTCGGGCGCCGGGTTTGCGCCAC
AACTTGGCGGGGAGAACGAA

Downstream 100 bases:

>100_bases
AGCGCAAAAAAATGGGCCGCACCGTTGCCGGGCGGCCCTGAAAAGTTTGGGAGAGGATGCCTGAAAGGCCCGTCCCAAAT
GGTCCCCACGCCGGTTTTGC

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NADPH:quinone reductase [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGC
QFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAV
DLGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI
GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVI
GRSVILPHG

Sequences:

>Translated_329_residues
MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGC
QFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAV
DLGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI
GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVI
GRSVILPHG
>Mature_328_residues
TTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPPLPFVPGMEGAGVVVEAGEGCQ
FKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQAASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVD
LGKALGLRVIAAASSDEKRAAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVIG
FAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHARYALADWKQAFAGMESRSVIG
RSVILPHG

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI22538446, Length=321, Percent_Identity=29.2834890965732, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI22538444, Length=321, Percent_Identity=29.2834890965732, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI194239674, Length=294, Percent_Identity=26.530612244898, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI13236495, Length=294, Percent_Identity=26.530612244898, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI18379349, Length=309, Percent_Identity=29.126213592233, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI194239676, Length=165, Percent_Identity=33.9393939393939, Blast_Score=108, Evalue=5e-24,
Organism=Homo sapiens, GI41872631, Length=303, Percent_Identity=30.3630363036304, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI28557745, Length=225, Percent_Identity=33.3333333333333, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI24308257, Length=332, Percent_Identity=25.9036144578313, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI47519420, Length=341, Percent_Identity=27.5659824046921, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI67078404, Length=289, Percent_Identity=25.6055363321799, Blast_Score=72, Evalue=8e-13,
Organism=Homo sapiens, GI67078406, Length=285, Percent_Identity=25.6140350877193, Blast_Score=70, Evalue=2e-12,
Organism=Escherichia coli, GI1790485, Length=315, Percent_Identity=28.8888888888889, Blast_Score=96, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17556000, Length=328, Percent_Identity=27.4390243902439, Blast_Score=91, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17507255, Length=221, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI71988145, Length=189, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212642053, Length=230, Percent_Identity=28.695652173913, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6319520, Length=333, Percent_Identity=29.4294294294294, Blast_Score=107, Evalue=3e-24,
Organism=Saccharomyces cerevisiae, GI6319621, Length=346, Percent_Identity=26.0115606936416, Blast_Score=79, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324486, Length=287, Percent_Identity=26.1324041811847, Blast_Score=73, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6323961, Length=292, Percent_Identity=25.3424657534247, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323729, Length=202, Percent_Identity=26.7326732673267, Blast_Score=63, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581345, Length=326, Percent_Identity=26.3803680981595, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19920632, Length=298, Percent_Identity=28.1879194630872, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI221330659, Length=298, Percent_Identity=28.1879194630872, Blast_Score=86, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040
- InterPro:   IPR002364 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: =1.6.5.5 [H]

Molecular weight: Translated: 34267; Mature: 34136

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPP
CCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCC
LPFVPGMEGAGVVVEAGEGCQFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQA
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCH
ASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVDLGKALGLRVIAAASSDEKR
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHCEEEEEECCCCHHH
AAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI
HHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCEEEEE
GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHA
EECCCCCCCCCCEEEEEECCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE
RYALADWKQAFAGMESRSVIGRSVILPHG
EHHHHHHHHHHCCCCHHHHCCCEEECCCC
>Mature Secondary Structure 
TTMCALQVRALSEDLGGLALVDLPMPVPSAGEALVRIEAAALGFPDLLMTKGRYQARPP
CCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHCCCCHHHHCCCCCCCCCC
LPFVPGMEGAGVVVEAGEGCQFKPGDEVIVGGLTGGVAQYGCFASGAMMPKPASLDMGQA
CCCCCCCCCCCEEEECCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCH
ASLRAAYLTAWVALVRRGMAQPGETLLVHGAAGGVGLAAVDLGKALGLRVIAAASSDEKR
HHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEHHHHHHHHHCEEEEEECCCCHHH
AAIQQLYAPDHVIDSAPGFRDRVLAITEGRGADLVYDPVGGDVFDESTRCIAFDGRLLVI
HHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCCCCCCCEEEEECCEEEEE
GFAGGRIPQIGVNIALIKGFSVVGVRAGEYGRRFPERGAENLAQVQRLASDGRIRPHVHA
EECCCCCCCCCCEEEEEECCEEEEEECCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE
RYALADWKQAFAGMESRSVIGRSVILPHG
EHHHHHHHHHHCCCCHHHHCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]