| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199677
Identifier: 87199677
GI number: 87199677
Start: 1740175
End: 1740561
Strand: Direct
Name: 87199677
Synonym: Saro_1660
Alternate gene names: NA
Gene position: 1740175-1740561 (Clockwise)
Preceding gene: 87199670
Following gene: 87199680
Centisome position: 48.86
GC content: 62.53
Gene sequence:
>387_bases ATGGACATGCCACGCACGCGCCGGTCCCTGTTGTACCGGCCCTTCATCACCGCCTGCCTGCTTTTTCCGGCAAGCGCCTT GCGGTGCCTGCGGAAGCGGCTGGGCGGGTTCGCATCGAACTCCCAGATACATGGGTATGACAGCGCCCGCGCATTCGGCA AGGCGCGATCGTGCGGGGATTGCGCGGGTACGCGGCTGGATGCGCCAAACGAGGGTCGGCACGACAACGGGATTGCCGGA TCGGACGGTCTGTCCTGCTTCGCTTCCATGCCCCCACCGTGTTTTACTGTGGGGGCCGTTCTAGTCCTAGTTCCCGGCGC TGTCGGCCAGAATACGTCTGCGCATCAGAACATGCGGCGCAAGATGTTGTCCTTGATGACAAAATGA
Upstream 100 bases:
>100_bases GGCGCAGGACGTCGATGATCTGCGCATCGATCTCTGCGGCCCTGGAATTCTTGTCGAGGCTCATGCCGGTCGTCCCACCC TGCCTTGTCCGGAACGGGCG
Downstream 100 bases:
>100_bases TGGTGCAGGGCGGCTGCGACGTGGAGTACGACAAGGCCGGCCATGAGGAAACCGAGCACTTCGTGGCTTTCGCCCGCAGC CTCGGCAAGTGGCGAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MDMPRTRRSLLYRPFITACLLFPASALRCLRKRLGGFASNSQIHGYDSARAFGKARSCGDCAGTRLDAPNEGRHDNGIAG SDGLSCFASMPPPCFTVGAVLVLVPGAVGQNTSAHQNMRRKMLSLMTK
Sequences:
>Translated_128_residues MDMPRTRRSLLYRPFITACLLFPASALRCLRKRLGGFASNSQIHGYDSARAFGKARSCGDCAGTRLDAPNEGRHDNGIAG SDGLSCFASMPPPCFTVGAVLVLVPGAVGQNTSAHQNMRRKMLSLMTK >Mature_128_residues MDMPRTRRSLLYRPFITACLLFPASALRCLRKRLGGFASNSQIHGYDSARAFGKARSCGDCAGTRLDAPNEGRHDNGIAG SDGLSCFASMPPPCFTVGAVLVLVPGAVGQNTSAHQNMRRKMLSLMTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13747; Mature: 13747
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMPRTRRSLLYRPFITACLLFPASALRCLRKRLGGFASNSQIHGYDSARAFGKARSCGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC CAGTRLDAPNEGRHDNGIAGSDGLSCFASMPPPCFTVGAVLVLVPGAVGQNTSAHQNMRR CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH KMLSLMTK HHHHHHCC >Mature Secondary Structure MDMPRTRRSLLYRPFITACLLFPASALRCLRKRLGGFASNSQIHGYDSARAFGKARSCGD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCC CAGTRLDAPNEGRHDNGIAGSDGLSCFASMPPPCFTVGAVLVLVPGAVGQNTSAHQNMRR CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH KMLSLMTK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA