| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199641
Identifier: 87199641
GI number: 87199641
Start: 1697762
End: 1698775
Strand: Direct
Name: 87199641
Synonym: Saro_1624
Alternate gene names: NA
Gene position: 1697762-1698775 (Clockwise)
Preceding gene: 87199640
Following gene: 87199642
Centisome position: 47.67
GC content: 64.99
Gene sequence:
>1014_bases ATGCAAATCAAGTCGCTGCTGCTTGGCATTCCCCCCGCCGGAGAAAACGTCTCGCCCGGCATGCGCACATCCGGCCTTCG CCCGGCCAATGCTACCAGCGCGCGCCCGTTCGTGGAAACGCTCCTGTTCTTCGTCCTCCTGGTCGTGGTCGATCATGCGG TTGCGGCTGGCGATGCATTCGCCGCGCTTGAGCCGCATCCGTTCTGGTTGCCGGTTATCCTGATGGCTGTTGCCTATGGT AGCGGGCCGGGGCTGTTGGCGGCGATCCTCGCCTCGTTGATCTGGGTTCTGGACGGCGAGCAGGTGCAGACTGGCGACCA CCTCGAGAGGATGCTTTCCCTCTCCATCCTGCCCATGCTCTGGGTCACCACGGCGCTCGTCACAGGCGAGATCACATCTT CGCACCTTGGTGCAATGCGCAGGCTGGCGCGCCACCGGAACCGTCTCACGCGCGAACAGAACAAGCTGACCGAGATCATC GGCGAGCTTGCAGAAACGAACCGCGCTCTCCAGGTCCGGATCGCGCTTGAAGAGCGCACCATTGCCGATGCGATCGCCGC GGCGGTCGAACTGGTCGACATGCGACCCTCGCAGCAACTTGCCGGCATCGAGCGCCTCGTCAACGTGGCGACGAAAGGCG GGGCATTCACCTTCTACGTCGTGGTCGGCGATCAGTTGCTGCCGCTCCTGCGCGGAAATGGCGCGCGCGGCGATCTGCGC TCCGACGGCGTGATCGCGGACATCTGGCGGGGCGCAATCCCCGGCGATCAGCCCATCGTGCAGGTTTCGCCGCGCTGCGC GGTCGTGCCAGTCTACGCCGATGGCGATCCCTACCTGCGCGGCCTGCTTTCGTTGGAAGGGATGGGCGAGGAGGTTCTTA CGCAATCCATGCGCGCCGCCCTCATCCACATCGCATATTCGCTCGGACAACTCGCCAACGAGGTTCCGGCGCCCGCCGAA CCCATGAAGCTGCCCCAGCGCCCCTGGCTGCTTGCGCAGGAACACGCTGCGTGA
Upstream 100 bases:
>100_bases TCGAGGCTGGCGGCGGAGTCAGCTCCATTTCCCGACCGGTGGTGTCCGGTCGGCAGTATTTCCTGCGCCTGTCGATCTCG CGCGCACTCGGGAGACGGTG
Downstream 100 bases:
>100_bases CGCTTCTGCTTGCCCTGGCCATTGCGGACGTGATCCTGCTTGGTGGCTGGGCAGGCGCGGGGCTTTCTGCTTCCCCTTGG TATTCGGTCGTCCATGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 337
Protein sequence:
>337_residues MQIKSLLLGIPPAGENVSPGMRTSGLRPANATSARPFVETLLFFVLLVVVDHAVAAGDAFAALEPHPFWLPVILMAVAYG SGPGLLAAILASLIWVLDGEQVQTGDHLERMLSLSILPMLWVTTALVTGEITSSHLGAMRRLARHRNRLTREQNKLTEII GELAETNRALQVRIALEERTIADAIAAAVELVDMRPSQQLAGIERLVNVATKGGAFTFYVVVGDQLLPLLRGNGARGDLR SDGVIADIWRGAIPGDQPIVQVSPRCAVVPVYADGDPYLRGLLSLEGMGEEVLTQSMRAALIHIAYSLGQLANEVPAPAE PMKLPQRPWLLAQEHAA
Sequences:
>Translated_337_residues MQIKSLLLGIPPAGENVSPGMRTSGLRPANATSARPFVETLLFFVLLVVVDHAVAAGDAFAALEPHPFWLPVILMAVAYG SGPGLLAAILASLIWVLDGEQVQTGDHLERMLSLSILPMLWVTTALVTGEITSSHLGAMRRLARHRNRLTREQNKLTEII GELAETNRALQVRIALEERTIADAIAAAVELVDMRPSQQLAGIERLVNVATKGGAFTFYVVVGDQLLPLLRGNGARGDLR SDGVIADIWRGAIPGDQPIVQVSPRCAVVPVYADGDPYLRGLLSLEGMGEEVLTQSMRAALIHIAYSLGQLANEVPAPAE PMKLPQRPWLLAQEHAA >Mature_337_residues MQIKSLLLGIPPAGENVSPGMRTSGLRPANATSARPFVETLLFFVLLVVVDHAVAAGDAFAALEPHPFWLPVILMAVAYG SGPGLLAAILASLIWVLDGEQVQTGDHLERMLSLSILPMLWVTTALVTGEITSSHLGAMRRLARHRNRLTREQNKLTEII GELAETNRALQVRIALEERTIADAIAAAVELVDMRPSQQLAGIERLVNVATKGGAFTFYVVVGDQLLPLLRGNGARGDLR SDGVIADIWRGAIPGDQPIVQVSPRCAVVPVYADGDPYLRGLLSLEGMGEEVLTQSMRAALIHIAYSLGQLANEVPAPAE PMKLPQRPWLLAQEHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36218; Mature: 36218
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIKSLLLGIPPAGENVSPGMRTSGLRPANATSARPFVETLLFFVLLVVVDHAVAAGDAF CCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AALEPHPFWLPVILMAVAYGSGPGLLAAILASLIWVLDGEQVQTGDHLERMLSLSILPML CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH WVTTALVTGEITSSHLGAMRRLARHRNRLTREQNKLTEIIGELAETNRALQVRIALEERT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHH IADAIAAAVELVDMRPSQQLAGIERLVNVATKGGAFTFYVVVGDQLLPLLRGNGARGDLR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCCCC SDGVIADIWRGAIPGDQPIVQVSPRCAVVPVYADGDPYLRGLLSLEGMGEEVLTQSMRAA CCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH LIHIAYSLGQLANEVPAPAEPMKLPQRPWLLAQEHAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQIKSLLLGIPPAGENVSPGMRTSGLRPANATSARPFVETLLFFVLLVVVDHAVAAGDAF CCHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC AALEPHPFWLPVILMAVAYGSGPGLLAAILASLIWVLDGEQVQTGDHLERMLSLSILPML CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH WVTTALVTGEITSSHLGAMRRLARHRNRLTREQNKLTEIIGELAETNRALQVRIALEERT HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHH IADAIAAAVELVDMRPSQQLAGIERLVNVATKGGAFTFYVVVGDQLLPLLRGNGARGDLR HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHCCCCCCCCCC SDGVIADIWRGAIPGDQPIVQVSPRCAVVPVYADGDPYLRGLLSLEGMGEEVLTQSMRAA CCCCHHHHHCCCCCCCCCEEEECCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHH LIHIAYSLGQLANEVPAPAEPMKLPQRPWLLAQEHAA HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA