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The map label for this gene is yagI [C]

Identifier: 87199574

GI number: 87199574

Start: 1612743

End: 1613537

Strand: Direct

Name: yagI [C]

Synonym: Saro_1557

Alternate gene names: 87199574

Gene position: 1612743-1613537 (Clockwise)

Preceding gene: 87199573

Following gene: 87199578

Centisome position: 45.28

GC content: 60.5

Gene sequence:

>795_bases
ATGCAAAGGACAAAGGTGAAGTCCGCGTCGCGGACGCTGGAGGTCCTTGAGCTCTTCATGGACGAACGGCGCCCGCTCAG
GTTGAACGAGATCTACAAGGCTCTCAACTACCCGCAGTCGAGCGCGACGAACCTGCTCAAGAGCATGGTCCTGATGGGCT
ATCTCAACTACAATCGCGCGAACATGACCTACCTGCCGACGATGCGGGTGACGGCGCTGGGAAGCTGGTTGCCGAGCATG
ATAAACCGCGAAGGTGGGCTGGTAAGCCTTGTCGACGAGATACAGCGCCGAACCGACGAGACGGTCGGCCTGGTCGCCCA
GAACGACCTCTATATCCAGTACATCATCCTCAAGACGCCCGGCCATGAATTCAAGATGGCGCCGAACGAAGGCACGATGC
GGTTGATGGTCGATTCCTCGTCGGGCCTGGCTTTGATGAGCCGGATGCGTCAGCGCGAGATCGACAAGATCTACCGATAC
TCCTGCCATTACGGCCTTGGCGGCGAGACGCTGCCGCAGTTCGAAGATCTGATGCGCGAGGTGCGCTGGACCCGCCAGGT
CGGTCATGCCTATGTGCCGAAACGGCCCACGCCGCAGTTGTCCTCGATCGCCATGCCGCTGGACGAGAACCTCTACGGAA
TTCCGCTCGCCATTGGCGTTGGCGGCATGGTCGATCGCATCTCCCGCGCAAAGCAGGACATTCTCGATGTGATGAGCGAG
GCCATCTCGGCCTTCAAGGCGCGTCAGGAGCAGGAGGACGCACGGGAGCACGAAGCCCTGCTGAATGCAGCCTGA

Upstream 100 bases:

>100_bases
CACATCTGTGATAGGCTGGCCAAGGCTTTGTCGCCGCGCTTGCTGGCCTTACACTCCCGGCACGACGGCTGACACTGAAG
CAGCCGGGAAGGGAGAAGCG

Downstream 100 bases:

>100_bases
GGTAGCAGGAACGCAAATTGGAAGCAGGAGGGGCGCCCTAACCAGGGCGCCCCTCCTGCTTTACCTTGCGCTGGCCAACT
CGCGACCGAAGGTGAGCGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein IclR; Regulatory Proteins IclR; IclR Helix-Turn-Helix Domain-Containing; Transcriptional Regulator IclR; Transcription Regulator; Transcriptional Regulator Family Protein

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MQRTKVKSASRTLEVLELFMDERRPLRLNEIYKALNYPQSSATNLLKSMVLMGYLNYNRANMTYLPTMRVTALGSWLPSM
INREGGLVSLVDEIQRRTDETVGLVAQNDLYIQYIILKTPGHEFKMAPNEGTMRLMVDSSSGLALMSRMRQREIDKIYRY
SCHYGLGGETLPQFEDLMREVRWTRQVGHAYVPKRPTPQLSSIAMPLDENLYGIPLAIGVGGMVDRISRAKQDILDVMSE
AISAFKARQEQEDAREHEALLNAA

Sequences:

>Translated_264_residues
MQRTKVKSASRTLEVLELFMDERRPLRLNEIYKALNYPQSSATNLLKSMVLMGYLNYNRANMTYLPTMRVTALGSWLPSM
INREGGLVSLVDEIQRRTDETVGLVAQNDLYIQYIILKTPGHEFKMAPNEGTMRLMVDSSSGLALMSRMRQREIDKIYRY
SCHYGLGGETLPQFEDLMREVRWTRQVGHAYVPKRPTPQLSSIAMPLDENLYGIPLAIGVGGMVDRISRAKQDILDVMSE
AISAFKARQEQEDAREHEALLNAA
>Mature_264_residues
MQRTKVKSASRTLEVLELFMDERRPLRLNEIYKALNYPQSSATNLLKSMVLMGYLNYNRANMTYLPTMRVTALGSWLPSM
INREGGLVSLVDEIQRRTDETVGLVAQNDLYIQYIILKTPGHEFKMAPNEGTMRLMVDSSSGLALMSRMRQREIDKIYRY
SCHYGLGGETLPQFEDLMREVRWTRQVGHAYVPKRPTPQLSSIAMPLDENLYGIPLAIGVGGMVDRISRAKQDILDVMSE
AISAFKARQEQEDAREHEALLNAA

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30079; Mature: 30079

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTKVKSASRTLEVLELFMDERRPLRLNEIYKALNYPQSSATNLLKSMVLMGYLNYNRA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
NMTYLPTMRVTALGSWLPSMINREGGLVSLVDEIQRRTDETVGLVAQNDLYIQYIILKTP
CEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHEEEEECCEEEEEEEEECC
GHEFKMAPNEGTMRLMVDSSSGLALMSRMRQREIDKIYRYSCHYGLGGETLPQFEDLMRE
CCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VRWTRQVGHAYVPKRPTPQLSSIAMPLDENLYGIPLAIGVGGMVDRISRAKQDILDVMSE
HHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
AISAFKARQEQEDAREHEALLNAA
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQRTKVKSASRTLEVLELFMDERRPLRLNEIYKALNYPQSSATNLLKSMVLMGYLNYNRA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCC
NMTYLPTMRVTALGSWLPSMINREGGLVSLVDEIQRRTDETVGLVAQNDLYIQYIILKTP
CEEEECHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHEEEEECCEEEEEEEEECC
GHEFKMAPNEGTMRLMVDSSSGLALMSRMRQREIDKIYRYSCHYGLGGETLPQFEDLMRE
CCCEEECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
VRWTRQVGHAYVPKRPTPQLSSIAMPLDENLYGIPLAIGVGGMVDRISRAKQDILDVMSE
HHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHH
AISAFKARQEQEDAREHEALLNAA
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA