| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199531
Identifier: 87199531
GI number: 87199531
Start: 1557945
End: 1558790
Strand: Reverse
Name: 87199531
Synonym: Saro_1513
Alternate gene names: NA
Gene position: 1558790-1557945 (Counterclockwise)
Preceding gene: 87199532
Following gene: 87199530
Centisome position: 43.77
GC content: 59.1
Gene sequence:
>846_bases ATGGGTAGTCCCGGAAGAGAATCGTGTCTGCAATTCGCGGCCTCGACGCTGTTTCGTTCTGCATGCGGAGCAGTGCTTCG CCGCTATGATCGGTTCGGCCAGACCTCGGTTCGCTTTTTCGACATGAGAATGGAAACGCTGATCTCCGGCTGGATCGGCA CGATACTGTGCATAGCCCTGGTCAAGACGTTACTTGCCCCCACACCAGCCACAAGCATCGCCGAAGGCATGGCAATGGCT CTGCCGTTCTTGCTTCTGGCAGCAGCCCCCGTAGCCGGCTTCCGCCTTGCGGCGGGCAGGTTTCCGAAAGGTCGGATCTC AGCTCAACCGATCGTTCGACTGGCACGCGTCGGCAACTGGCGCAATGCATCAAAGGGCGACGTCGCTCGCGCCGTGGCAG GCGGATCGGGGGGCTTTCTCGTTTCACTCCTTATCGGCATCATCCTGAACGTGCCGGTGCGCGCGATGGAATTTCTCGCC AGCGTGCCCGCGATCAATCCCGGCGATCCGCGCTGGGCTCACATAATCGTTCTGGCGATGACAGTCGACGTGGTGGTGAT GACCTTCCTCTACATGATCTGTTTTGTCATGGCGCTGCGCAGCGTCCCGCTTTTTCCCAGGTTTCTGGCTCTTGCCTGGG TGGCTGACATGGCGTTGCAGGTTGGCATGGCGAATTATCTGGCGAACACGCCCGGCATGCCAACGTCCGTCGCGCAGCCG CTTTTCGGCCTGCTTATGGGCAACATCAAGAAGGTTTGGATCAGCGTAATGATCTGGCTGCCCTATCTTCTTGTTTCCAA GCAGGTAAACCTGCAGTTCCGCCACAGGGTGCGTAGCGACGCATGA
Upstream 100 bases:
>100_bases AGACACTCTCACGAAATCTGAATTCTTTAACTTGATATGAACCAATTTAGGGCACATTCGATGCTAACGCGTTGTGTCAA CTCGGGGATATTGCGGACAA
Downstream 100 bases:
>100_bases CGAAGGCGCAAAGCCAGAGCCATATTTCCGCTCAATAGCCGTCAATCGAACAGCAATAGGTTGCGTTTTAAAGCTGCCAG TTAGCCATGAAACGCAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMA LPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLA SVPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA
Sequences:
>Translated_281_residues MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMA LPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLA SVPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA >Mature_280_residues GSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMAL PFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLAS VPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQPL FGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30484; Mature: 30353
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKTLLAPTPATSIAEGMAMALPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNW HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC RNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLASVPAINPGDPRWAHIIVLAM CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC >Mature Secondary Structure GSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VKTLLAPTPATSIAEGMAMALPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNW HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC RNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLASVPAINPGDPRWAHIIVLAM CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA