Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199531

Identifier: 87199531

GI number: 87199531

Start: 1557945

End: 1558790

Strand: Reverse

Name: 87199531

Synonym: Saro_1513

Alternate gene names: NA

Gene position: 1558790-1557945 (Counterclockwise)

Preceding gene: 87199532

Following gene: 87199530

Centisome position: 43.77

GC content: 59.1

Gene sequence:

>846_bases
ATGGGTAGTCCCGGAAGAGAATCGTGTCTGCAATTCGCGGCCTCGACGCTGTTTCGTTCTGCATGCGGAGCAGTGCTTCG
CCGCTATGATCGGTTCGGCCAGACCTCGGTTCGCTTTTTCGACATGAGAATGGAAACGCTGATCTCCGGCTGGATCGGCA
CGATACTGTGCATAGCCCTGGTCAAGACGTTACTTGCCCCCACACCAGCCACAAGCATCGCCGAAGGCATGGCAATGGCT
CTGCCGTTCTTGCTTCTGGCAGCAGCCCCCGTAGCCGGCTTCCGCCTTGCGGCGGGCAGGTTTCCGAAAGGTCGGATCTC
AGCTCAACCGATCGTTCGACTGGCACGCGTCGGCAACTGGCGCAATGCATCAAAGGGCGACGTCGCTCGCGCCGTGGCAG
GCGGATCGGGGGGCTTTCTCGTTTCACTCCTTATCGGCATCATCCTGAACGTGCCGGTGCGCGCGATGGAATTTCTCGCC
AGCGTGCCCGCGATCAATCCCGGCGATCCGCGCTGGGCTCACATAATCGTTCTGGCGATGACAGTCGACGTGGTGGTGAT
GACCTTCCTCTACATGATCTGTTTTGTCATGGCGCTGCGCAGCGTCCCGCTTTTTCCCAGGTTTCTGGCTCTTGCCTGGG
TGGCTGACATGGCGTTGCAGGTTGGCATGGCGAATTATCTGGCGAACACGCCCGGCATGCCAACGTCCGTCGCGCAGCCG
CTTTTCGGCCTGCTTATGGGCAACATCAAGAAGGTTTGGATCAGCGTAATGATCTGGCTGCCCTATCTTCTTGTTTCCAA
GCAGGTAAACCTGCAGTTCCGCCACAGGGTGCGTAGCGACGCATGA

Upstream 100 bases:

>100_bases
AGACACTCTCACGAAATCTGAATTCTTTAACTTGATATGAACCAATTTAGGGCACATTCGATGCTAACGCGTTGTGTCAA
CTCGGGGATATTGCGGACAA

Downstream 100 bases:

>100_bases
CGAAGGCGCAAAGCCAGAGCCATATTTCCGCTCAATAGCCGTCAATCGAACAGCAATAGGTTGCGTTTTAAAGCTGCCAG
TTAGCCATGAAACGCAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMA
LPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLA
SVPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP
LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA

Sequences:

>Translated_281_residues
MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMA
LPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLA
SVPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP
LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA
>Mature_280_residues
GSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIALVKTLLAPTPATSIAEGMAMAL
PFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNWRNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLAS
VPAINPGDPRWAHIIVLAMTVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQPL
FGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30484; Mature: 30353

Theoretical pI: Translated: 11.54; Mature: 11.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTLLAPTPATSIAEGMAMALPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
RNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLASVPAINPGDPRWAHIIVLAM
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure 
GSPGRESCLQFAASTLFRSACGAVLRRYDRFGQTSVRFFDMRMETLISGWIGTILCIAL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VKTLLAPTPATSIAEGMAMALPFLLLAAAPVAGFRLAAGRFPKGRISAQPIVRLARVGNW
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCHHHHHHHHHHCCC
RNASKGDVARAVAGGSGGFLVSLLIGIILNVPVRAMEFLASVPAINPGDPRWAHIIVLAM
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TVDVVVMTFLYMICFVMALRSVPLFPRFLALAWVADMALQVGMANYLANTPGMPTSVAQP
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LFGLLMGNIKKVWISVMIWLPYLLVSKQVNLQFRHRVRSDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA