| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199474
Identifier: 87199474
GI number: 87199474
Start: 1498340
End: 1498870
Strand: Direct
Name: 87199474
Synonym: Saro_1453
Alternate gene names: NA
Gene position: 1498340-1498870 (Clockwise)
Preceding gene: 87199473
Following gene: 87199475
Centisome position: 42.07
GC content: 64.78
Gene sequence:
>531_bases ATGACCGGGACGCGCTTCAGCAAGGGGCATTCGGGCAACCCGAAAGGACGGCCGCGCAAGGTGCGGCCCAATGTCTCTGC CTTTGACGTGATCTTCGACCGGACGCTTACCGTCACCCAGAATGGATTGGAGCGCGAGCTGACCGTTGACGAGGGGTTGC AGCTCCAGACCTATCAGGCCGCGCTCAAGGGCAGCCGTATGGCCATCCGCCATGTCCTGCGCATGATCGAAAAGCGCGAG GCAGCGCTTGCAAAGCGCGATCCGCCAAAGCCGAAGCCGGTGAAGATGGAAATCGAGCACGACGCCGACAATGCCGATGC GGCAATGCTCATCCTTGGCATTGCCGGACATGGAGAGGCACTGCCCGGTGGCGGCCCGGCAACGCGGCCGCTGCGAATTG CGACCTGGGCCGCACAGGCGGCAATCAGCCGGCCGGGCCGCCGTCATCTCGATGCAAGGGCGGTCGAGGACATCGAGCGC CTGGTTGCGAACCCGGGCAAGTTGCGCTGGCCGAGGGGAAGGGGACAATGA
Upstream 100 bases:
>100_bases TCGATCCGGCCTATGTGGATGTCGCGCTTGATCGCTGGAGCGCGCTGACAGGGCGCGAGCCGGTGCTGGTTGGCAGCGGC GCAGGCGGAGTGGACAGGGC
Downstream 100 bases:
>100_bases CCGGCGACCCGCCCGGCCAGGGCGAAACCGGTTCTGCCGGTTATCGCCGACCGCCTGCCGCGACCCGCTTCGTCAAGGGG CAGAGCGGCAATCCGAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MTGTRFSKGHSGNPKGRPRKVRPNVSAFDVIFDRTLTVTQNGLERELTVDEGLQLQTYQAALKGSRMAIRHVLRMIEKRE AALAKRDPPKPKPVKMEIEHDADNADAAMLILGIAGHGEALPGGGPATRPLRIATWAAQAAISRPGRRHLDARAVEDIER LVANPGKLRWPRGRGQ
Sequences:
>Translated_176_residues MTGTRFSKGHSGNPKGRPRKVRPNVSAFDVIFDRTLTVTQNGLERELTVDEGLQLQTYQAALKGSRMAIRHVLRMIEKRE AALAKRDPPKPKPVKMEIEHDADNADAAMLILGIAGHGEALPGGGPATRPLRIATWAAQAAISRPGRRHLDARAVEDIER LVANPGKLRWPRGRGQ >Mature_175_residues TGTRFSKGHSGNPKGRPRKVRPNVSAFDVIFDRTLTVTQNGLERELTVDEGLQLQTYQAALKGSRMAIRHVLRMIEKREA ALAKRDPPKPKPVKMEIEHDADNADAAMLILGIAGHGEALPGGGPATRPLRIATWAAQAAISRPGRRHLDARAVEDIERL VANPGKLRWPRGRGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19315; Mature: 19183
Theoretical pI: Translated: 11.47; Mature: 11.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTRFSKGHSGNPKGRPRKVRPNVSAFDVIFDRTLTVTQNGLERELTVDEGLQLQTYQA CCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHH ALKGSRMAIRHVLRMIEKREAALAKRDPPKPKPVKMEIEHDADNADAAMLILGIAGHGEA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC LPGGGPATRPLRIATWAAQAAISRPGRRHLDARAVEDIERLVANPGKLRWPRGRGQ CCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCC >Mature Secondary Structure TGTRFSKGHSGNPKGRPRKVRPNVSAFDVIFDRTLTVTQNGLERELTVDEGLQLQTYQA CCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHCEEEEECCCCCEEEECCCCCCHHHHHH ALKGSRMAIRHVLRMIEKREAALAKRDPPKPKPVKMEIEHDADNADAAMLILGIAGHGEA HHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCC LPGGGPATRPLRIATWAAQAAISRPGRRHLDARAVEDIERLVANPGKLRWPRGRGQ CCCCCCCCCCEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA