Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is mdoC [H]

Identifier: 87199440

GI number: 87199440

Start: 1460403

End: 1461563

Strand: Reverse

Name: mdoC [H]

Synonym: Saro_1419

Alternate gene names: 87199440

Gene position: 1461563-1460403 (Counterclockwise)

Preceding gene: 87199441

Following gene: 87199437

Centisome position: 41.04

GC content: 66.41

Gene sequence:

>1161_bases
ATGACGCCGCCCTCCGGACGCCTTCATCACCTCGACGCCGCACGTGCGCTGCTGCTCCTGCTCGGGCTGCCGTTCCACGT
CGCAACCAAGGCAATATTCGAAAGCGACCCGCCGGCGCTCGACTTCCAGCAATCGCTGGTGATCGGGGGCTGGGCCTCGC
TCACCCACGTTTTCCGGATGTTCGCCTTCTTCATGCTGGCTGGCTACTTCGCCGGCATGATCCGAGAGCGAAAGGGCGCT
GGCGCATGGCTGGCCGAACGCAGCCGCCGCCTTGGCCTGCCGTTTCTCGCGAGCATCCTGACGCTCGGTGCAATTCAGTA
CCAGCTTCAGGACGGCCTTCTCCACAAGCCGTCGCCAAGGTTCCTCGGCGCACCGCTGGCACTGGACCACTTGTGGTTCC
TCGTCGTCCTGCTTGGCTTCTGCGCCGTTTATGCCGCTATTCCTGGATCGCGTATTCCCCAGGGGGGGCGCACGGGCCGG
GCCTTGTGCCTGTCGGCGCCGGGCAGCCTCGCGCTCCTTGCCGCACTCGCCTTGTGGGGCCTCGTCCGCTATGCCGCCGA
ACAGGTCCCGGCCATTCCCGACGCGCCGAGCGAAACCCTGCTGTGGCAGCAGTTCCTGTTTCACTCCGCACCGTTCGCGC
TGGGAGTCGTGGCATGGCACGCCCGCATAGGAGAGCGGATCTTCAACTTGCGCAGCCGCTGGATCGTGCCGGCCATTCTC
CTGCTGCTAATCCCCTATTTCCCGCTCGATCCGCTGGTCCGCCCGGCGCTGGGCAAGGAAATCTACCCGGATCTGGCCGG
CACCCTGGTCCTGCGCGCAATCGATCTTCCGCTGGCCTACCTGATGTCGCTTGGCCTGTTCCGGCTGCTTGCCGAACTCG
TGCGCGGGCCCAGCCGCGTCGTCAGCTTCTTCGTCGACGGCGCGCTCGCCATCTACCTGTTCCACCTCGTCTGGGCGATG
CTGGTCCTGCCCTGGGTCCGGGCGCTGCCGATCGCGGCGGAAGCGCAATGGATGCTAGCCTCACTCTTGGTGCTAGGCCT
GTCGATGGCAAGCTACCTCGCCGCACGCTCGACCCGGCTTACCTCGGTGCTGTTCTGCGGGGCCGCGCCGAAACGACATC
AGCCGAAGCACACTACTCCCGCCCGGCCAGCACGCCCCTGA

Upstream 100 bases:

>100_bases
GACGCCCTTGCCGGTGTCATGGGCGCCCTCGGCGCACCGCCGGAAGGGTCCTACGAAGAATATCTCGCCTGAAGTTGCGC
CAGTGGCTAGGGGGGCGGGC

Downstream 100 bases:

>100_bases
TCACCAGCGCGAACGCGCCTACCATCGCGAAGGACAGCGCGAACAGGAGGCCGCCGACGAGCCACTCCTGCCAGTCAGCT
CCGGTGTGGCCGGCAGCCGT

Product: acyltransferase 3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MTPPSGRLHHLDAARALLLLLGLPFHVATKAIFESDPPALDFQQSLVIGGWASLTHVFRMFAFFMLAGYFAGMIRERKGA
GAWLAERSRRLGLPFLASILTLGAIQYQLQDGLLHKPSPRFLGAPLALDHLWFLVVLLGFCAVYAAIPGSRIPQGGRTGR
ALCLSAPGSLALLAALALWGLVRYAAEQVPAIPDAPSETLLWQQFLFHSAPFALGVVAWHARIGERIFNLRSRWIVPAIL
LLLIPYFPLDPLVRPALGKEIYPDLAGTLVLRAIDLPLAYLMSLGLFRLLAELVRGPSRVVSFFVDGALAIYLFHLVWAM
LVLPWVRALPIAAEAQWMLASLLVLGLSMASYLAARSTRLTSVLFCGAAPKRHQPKHTTPARPARP

Sequences:

>Translated_386_residues
MTPPSGRLHHLDAARALLLLLGLPFHVATKAIFESDPPALDFQQSLVIGGWASLTHVFRMFAFFMLAGYFAGMIRERKGA
GAWLAERSRRLGLPFLASILTLGAIQYQLQDGLLHKPSPRFLGAPLALDHLWFLVVLLGFCAVYAAIPGSRIPQGGRTGR
ALCLSAPGSLALLAALALWGLVRYAAEQVPAIPDAPSETLLWQQFLFHSAPFALGVVAWHARIGERIFNLRSRWIVPAIL
LLLIPYFPLDPLVRPALGKEIYPDLAGTLVLRAIDLPLAYLMSLGLFRLLAELVRGPSRVVSFFVDGALAIYLFHLVWAM
LVLPWVRALPIAAEAQWMLASLLVLGLSMASYLAARSTRLTSVLFCGAAPKRHQPKHTTPARPARP
>Mature_385_residues
TPPSGRLHHLDAARALLLLLGLPFHVATKAIFESDPPALDFQQSLVIGGWASLTHVFRMFAFFMLAGYFAGMIRERKGAG
AWLAERSRRLGLPFLASILTLGAIQYQLQDGLLHKPSPRFLGAPLALDHLWFLVVLLGFCAVYAAIPGSRIPQGGRTGRA
LCLSAPGSLALLAALALWGLVRYAAEQVPAIPDAPSETLLWQQFLFHSAPFALGVVAWHARIGERIFNLRSRWIVPAILL
LLIPYFPLDPLVRPALGKEIYPDLAGTLVLRAIDLPLAYLMSLGLFRLLAELVRGPSRVVSFFVDGALAIYLFHLVWAML
VLPWVRALPIAAEAQWMLASLLVLGLSMASYLAARSTRLTSVLFCGAAPKRHQPKHTTPARPARP

Specific function: Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyltransferase 3 family. OpgC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787285, Length=398, Percent_Identity=24.8743718592965, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002656 [H]

Pfam domain/function: PF01757 Acyl_transf_3 [H]

EC number: 2.1.-.- [C]

Molecular weight: Translated: 42257; Mature: 42126

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPSGRLHHLDAARALLLLLGLPFHVATKAIFESDPPALDFQQSLVIGGWASLTHVFRM
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FAFFMLAGYFAGMIRERKGAGAWLAERSRRLGLPFLASILTLGAIQYQLQDGLLHKPSPR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
FLGAPLALDHLWFLVVLLGFCAVYAAIPGSRIPQGGRTGRALCLSAPGSLALLAALALWG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
LVRYAAEQVPAIPDAPSETLLWQQFLFHSAPFALGVVAWHARIGERIFNLRSRWIVPAIL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLIPYFPLDPLVRPALGKEIYPDLAGTLVLRAIDLPLAYLMSLGLFRLLAELVRGPSRV
HHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VSFFVDGALAIYLFHLVWAMLVLPWVRALPIAAEAQWMLASLLVLGLSMASYLAARSTRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLFCGAAPKRHQPKHTTPARPARP
HHHHEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TPPSGRLHHLDAARALLLLLGLPFHVATKAIFESDPPALDFQQSLVIGGWASLTHVFRM
CCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
FAFFMLAGYFAGMIRERKGAGAWLAERSRRLGLPFLASILTLGAIQYQLQDGLLHKPSPR
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
FLGAPLALDHLWFLVVLLGFCAVYAAIPGSRIPQGGRTGRALCLSAPGSLALLAALALWG
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHH
LVRYAAEQVPAIPDAPSETLLWQQFLFHSAPFALGVVAWHARIGERIFNLRSRWIVPAIL
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLIPYFPLDPLVRPALGKEIYPDLAGTLVLRAIDLPLAYLMSLGLFRLLAELVRGPSRV
HHHHCCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
VSFFVDGALAIYLFHLVWAMLVLPWVRALPIAAEAQWMLASLLVLGLSMASYLAARSTRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSVLFCGAAPKRHQPKHTTPARPARP
HHHHEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA