| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199432
Identifier: 87199432
GI number: 87199432
Start: 1454816
End: 1455571
Strand: Direct
Name: 87199432
Synonym: Saro_1411
Alternate gene names: NA
Gene position: 1454816-1455571 (Clockwise)
Preceding gene: 87199431
Following gene: 87199433
Centisome position: 40.85
GC content: 65.08
Gene sequence:
>756_bases ATGACGGAAGCAACCACCGAGTTCTTTCCCGGCTTCGGCGGCGCGCAACTGGCGCTGCACCGGCTGGGGCAGGGAAGGCC GGTGGTGCTTCTGCATGGCCTGTTCTCGTCCGCAGAGGTCAACTGGATCAAGTTCGGCACTGCGGCGAGATTGTCCGAAG AGGGGTTCGAGTGCCTGATGCCGGATCTCAGGGTTCATGGCAAAAGCGCGGCACCGCACGAGCCTGAGGCTTACCCCCAG GACGTGCTTGTGCGTGACCTGGAAGCGCTCGTCGCACATCTGGGCCTGGTCGATTTCGATCTCGTCGGTTTCTCGCTCGG CTCGCGCACATCGGCGCGCGCAGTGGTGGCGGGGCTCAAGCCGCGGCGGCTGGTGCTGGGTGGCATGGGGCTGGAAGGGC TGGCCGGCTGGGCACGGCGGCAAGACTTCTTCATCGACGTGATCGACCGGTTCGGCACGATCCGTCCCGGCGATCCGGCC TATCTCTCGCAGCAGTTCCTGAAATCGATGGGCGTCGACCGCGAGGCGGCGCGCCTCCTGCTTGGCACCATGGCGGATAC CGATCCCGCGGAACTGGGTGCCATTTCCATGCCGACGCTGGTGCTCTGCGGCGACAAGGACGACGATAACGGTTCCGCGC AGCGGCTTGCCGAAGTCCTGCCGGATGCATCGCTGGTACTCATCCCGGGTACGCACATGAGTAGCGTGACCGTGCCCGAG ATGGGCCGCGAAATTGCGGCGTTCCTTTCCCGATAA
Upstream 100 bases:
>100_bases GGTGCGTCTCGGACAACCTGCGCAAGGGTGCGGCCCTGAACGCCGTCCAGATCGCCGAACTGCTCGGCCGTCGCCACCTC AAGAAGGGCTGAGCGACTCC
Downstream 100 bases:
>100_bases ATTCCTTCCTTCGCCCTCTTGCAGGGGGGCGAGGTTCGTGTCAGCTTCCATTCATCAACGCAGAGGCCGCGAAGAGCCTC GGTACGGGATCTGGATGAAT
Product: alpha/beta hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Hydrolase Protein; Hydrolase Family Protein; Hydrolase Alpha/Beta Hydrolase Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family Protein; Lysophospholipase; Hydrolase Or Acyltransferase Of Alpha/Beta Superfamily; Chloride Peroxidase; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Fold Family Protein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTEATTEFFPGFGGAQLALHRLGQGRPVVLLHGLFSSAEVNWIKFGTAARLSEEGFECLMPDLRVHGKSAAPHEPEAYPQ DVLVRDLEALVAHLGLVDFDLVGFSLGSRTSARAVVAGLKPRRLVLGGMGLEGLAGWARRQDFFIDVIDRFGTIRPGDPA YLSQQFLKSMGVDREAARLLLGTMADTDPAELGAISMPTLVLCGDKDDDNGSAQRLAEVLPDASLVLIPGTHMSSVTVPE MGREIAAFLSR
Sequences:
>Translated_251_residues MTEATTEFFPGFGGAQLALHRLGQGRPVVLLHGLFSSAEVNWIKFGTAARLSEEGFECLMPDLRVHGKSAAPHEPEAYPQ DVLVRDLEALVAHLGLVDFDLVGFSLGSRTSARAVVAGLKPRRLVLGGMGLEGLAGWARRQDFFIDVIDRFGTIRPGDPA YLSQQFLKSMGVDREAARLLLGTMADTDPAELGAISMPTLVLCGDKDDDNGSAQRLAEVLPDASLVLIPGTHMSSVTVPE MGREIAAFLSR >Mature_250_residues TEATTEFFPGFGGAQLALHRLGQGRPVVLLHGLFSSAEVNWIKFGTAARLSEEGFECLMPDLRVHGKSAAPHEPEAYPQD VLVRDLEALVAHLGLVDFDLVGFSLGSRTSARAVVAGLKPRRLVLGGMGLEGLAGWARRQDFFIDVIDRFGTIRPGDPAY LSQQFLKSMGVDREAARLLLGTMADTDPAELGAISMPTLVLCGDKDDDNGSAQRLAEVLPDASLVLIPGTHMSSVTVPEM GREIAAFLSR
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26940; Mature: 26809
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEATTEFFPGFGGAQLALHRLGQGRPVVLLHGLFSSAEVNWIKFGTAARLSEEGFECLM CCCCCCHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCHHHHHHCCHHHHC PDLRVHGKSAAPHEPEAYPQDVLVRDLEALVAHLGLVDFDLVGFSLGSRTSARAVVAGLK CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCC PRRLVLGGMGLEGLAGWARRQDFFIDVIDRFGTIRPGDPAYLSQQFLKSMGVDREAARLL CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH LGTMADTDPAELGAISMPTLVLCGDKDDDNGSAQRLAEVLPDASLVLIPGTHMSSVTVPE HHHCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHH MGREIAAFLSR HHHHHHHHHCC >Mature Secondary Structure TEATTEFFPGFGGAQLALHRLGQGRPVVLLHGLFSSAEVNWIKFGTAARLSEEGFECLM CCCCCHHCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCHHHHHHCCHHHHC PDLRVHGKSAAPHEPEAYPQDVLVRDLEALVAHLGLVDFDLVGFSLGSRTSARAVVAGLK CHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHCCC PRRLVLGGMGLEGLAGWARRQDFFIDVIDRFGTIRPGDPAYLSQQFLKSMGVDREAARLL CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH LGTMADTDPAELGAISMPTLVLCGDKDDDNGSAQRLAEVLPDASLVLIPGTHMSSVTVPE HHHCCCCCHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCHHH MGREIAAFLSR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA