| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is kup1
Identifier: 87199415
GI number: 87199415
Start: 1437252
End: 1439198
Strand: Direct
Name: kup1
Synonym: Saro_1394
Alternate gene names: 87199415
Gene position: 1437252-1439198 (Clockwise)
Preceding gene: 87199414
Following gene: 87199416
Centisome position: 40.35
GC content: 63.79
Gene sequence:
>1947_bases ATGAGTGATGCCGTTACCGACGCGGATGGATCTTCAGCGCAGTCTCATGCGCAGTCCGCCGGACATCATGCCGTGCAGGG CCACGGCGGTCATTCGCAAGGCCCCCTGCTCAAGCTGGCGGTAGGCGCGATCGGCGTAGTCTTCGGCGACATCGGCACCA GCCCGCTCTACGCGCTGCGCGATACGTTCGCCGGCCACCACAAGCTCCCGCTCGACCTGCTGCACATCTACGGCATCATC AGCCTGATGTTCTGGTCGATGATGATCATCGTGACGTTCAAGTACGTCTCGGTCATCATGCGCGCCGACAACAAGGGCGA GGGCGGCAGCCTTGCGCTCCTCGCGCTGATAAACCAGCACACCGACGGCAAGCGCTGGGGCAGGGGCATCATCCTGCTCG GCGTCTTTGCGACGGCCCTGTTCTACGGCGATTCGATGATCACCCCGGCGGTCTCGGTCATGGGCGCGATCGAAGGTGTG GCCGTCTACCGGCCCGACATGCATCCGCTGATCGTGCCGCTGGTCGTCGGCATCCTCATCGGCCTGTTCTTCATCCAGAG CCGCGGGACCGAAAAGGTCGCCGCCTTCTTCGGCCCGATCATGCTGGTCTACTTCGGCACGATCGCCGTGCTCGGTGCGC TGAGCATTGCGGAATATCCGCCGGTCATCGCCGCGTTGAGCCCGCACCACGCCGTGACGATGTTCATCGCCGATCCGTGG CGCGGTTTCCTGGCAATGGGCGCGGCGGTCCTGGCCGTGACCGGTGCCGAGGCGCTCTATGCCGACATGGGCCATTTCGG TCGCAGCCCGATCCGCATGTCGTGGCTGGTCTTCGTGCTGCCCGCGCTGGTGCTGAATTACCTCGGTCAGGCTTCGCTGC TGATCCGCAATCCGGCAGCGCTCGAAAGCCCGTTCTATTATCTCGCGCCCGAGTGGTTCCAGTGGCCGCTGCTGTTTATT GCCTCGTGCGCGGCGGTCATTGCCTCGCAGGCGGTGATCTCCGGCGCGTTTTCGGTAACGCAGCAGGCGATCCAGCTCGG CTTCATCCCGCGCATGACGATCAAGCACACGTCTACCGCTGCGGGACAGATCTTCATTCCTGTGATCAACTGGGCGCTGA TGATCGCCGTGATCCTGCTGGTCCTGGTCTTCCAGCGCTCGTCCAACCTGACCGCCGCCTATGGTATCGCGGTGACCGGC GCGATGCTGATCGACAATTTCCTGCTCGCCGTGGTGCTGTTCAAGCTGTGGCAGTGGAAGGCCCCGGCGGCCATCGCCAT GCTCGCGGTGTTCTTCGCCATCGATGCGGCCTATCTCGGCGCCAACATGACCAAGATCCCCGACGGTGGTTGGGTGCCGC TGGTCATGGGCATCGCGATCTTCACACTGCTCACCACCTGGTCGCGCGGGCGCGCCCTGATGCGCGAGAACATGGCCGAG GGCACCATTCCGCTCGACGTCTTTACCAAGTCAGCCCATTCCAGCGCCGCGCGCGTTTCGGGCACGGCGATCTTCATGGC CTCGACCGCGGCGGGCGTGCCCTCGGCGCTGCTGCACAACATCAAGCACAACAAGGTGCTCCACGAACGCGTGGTCATCC TGACCGTGTCGATCGAGGACGTGCCCTACGTCGACGAGGGCGAGCGGTATTCGGTCAAGGACTTCGGCAACGGCTTCTAC CGCCTGACGCTGCGTTTTGGCTTCCTTGAGGAAACGGACGTGCCCGGTGCGCTCAAGGGCGTCAGCATGTGCGGCGAACC GTTCAACATGATGAAGACCAGCTTCTTCCTCTCGCGCCAGACGCTGATCCCGTCGGACAAGCCGGGCATGGCCCTGTGGC GCGAAAAGCTGTTCGCCTGGATGCTCCGCAATGCGGCAAGCGCGATGGAGTTCTTCCGGCTGCCCACGAACCGCGTGGTC GAGCTGGGCAGCCAGCTCAAGATTTGA
Upstream 100 bases:
>100_bases CCTCCCATTGCAGGGCCATTGGGGCAGTGCTAAAGCGCCGCGCCGTTTCCTCCGTCCCGGTGGAGACGCGCAAGGCTTTG AGGCCGGGGGCACCGTTGCC
Downstream 100 bases:
>100_bases CCGCCCGGGGATAGCGGCATCGGTTCGTCGCATCTGTGCCTCTGCCGGACTTGGCAATCACGGCGCATTTGTTACCGTCG CCACCATGGGGGTTCAGCGC
Product: K+ potassium transporter
Products: K (I) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 648; Mature: 647
Protein sequence:
>648_residues MSDAVTDADGSSAQSHAQSAGHHAVQGHGGHSQGPLLKLAVGAIGVVFGDIGTSPLYALRDTFAGHHKLPLDLLHIYGII SLMFWSMMIIVTFKYVSVIMRADNKGEGGSLALLALINQHTDGKRWGRGIILLGVFATALFYGDSMITPAVSVMGAIEGV AVYRPDMHPLIVPLVVGILIGLFFIQSRGTEKVAAFFGPIMLVYFGTIAVLGALSIAEYPPVIAALSPHHAVTMFIADPW RGFLAMGAAVLAVTGAEALYADMGHFGRSPIRMSWLVFVLPALVLNYLGQASLLIRNPAALESPFYYLAPEWFQWPLLFI ASCAAVIASQAVISGAFSVTQQAIQLGFIPRMTIKHTSTAAGQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTG AMLIDNFLLAVVLFKLWQWKAPAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAE GTIPLDVFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIEDVPYVDEGERYSVKDFGNGFY RLTLRFGFLEETDVPGALKGVSMCGEPFNMMKTSFFLSRQTLIPSDKPGMALWREKLFAWMLRNAASAMEFFRLPTNRVV ELGSQLKI
Sequences:
>Translated_648_residues MSDAVTDADGSSAQSHAQSAGHHAVQGHGGHSQGPLLKLAVGAIGVVFGDIGTSPLYALRDTFAGHHKLPLDLLHIYGII SLMFWSMMIIVTFKYVSVIMRADNKGEGGSLALLALINQHTDGKRWGRGIILLGVFATALFYGDSMITPAVSVMGAIEGV AVYRPDMHPLIVPLVVGILIGLFFIQSRGTEKVAAFFGPIMLVYFGTIAVLGALSIAEYPPVIAALSPHHAVTMFIADPW RGFLAMGAAVLAVTGAEALYADMGHFGRSPIRMSWLVFVLPALVLNYLGQASLLIRNPAALESPFYYLAPEWFQWPLLFI ASCAAVIASQAVISGAFSVTQQAIQLGFIPRMTIKHTSTAAGQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTG AMLIDNFLLAVVLFKLWQWKAPAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAE GTIPLDVFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIEDVPYVDEGERYSVKDFGNGFY RLTLRFGFLEETDVPGALKGVSMCGEPFNMMKTSFFLSRQTLIPSDKPGMALWREKLFAWMLRNAASAMEFFRLPTNRVV ELGSQLKI >Mature_647_residues SDAVTDADGSSAQSHAQSAGHHAVQGHGGHSQGPLLKLAVGAIGVVFGDIGTSPLYALRDTFAGHHKLPLDLLHIYGIIS LMFWSMMIIVTFKYVSVIMRADNKGEGGSLALLALINQHTDGKRWGRGIILLGVFATALFYGDSMITPAVSVMGAIEGVA VYRPDMHPLIVPLVVGILIGLFFIQSRGTEKVAAFFGPIMLVYFGTIAVLGALSIAEYPPVIAALSPHHAVTMFIADPWR GFLAMGAAVLAVTGAEALYADMGHFGRSPIRMSWLVFVLPALVLNYLGQASLLIRNPAALESPFYYLAPEWFQWPLLFIA SCAAVIASQAVISGAFSVTQQAIQLGFIPRMTIKHTSTAAGQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTGA MLIDNFLLAVVLFKLWQWKAPAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAEG TIPLDVFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIEDVPYVDEGERYSVKDFGNGFYR LTLRFGFLEETDVPGALKGVSMCGEPFNMMKTSFFLSRQTLIPSDKPGMALWREKLFAWMLRNAASAMEFFRLPTNRVVE LGSQLKI
Specific function: Transport of potassium into the cell
COG id: COG3158
COG function: function code P; K+ transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAK/KUP transporter (TC 2.A.72) family
Homologues:
Organism=Escherichia coli, GI48994960, Length=619, Percent_Identity=43.7802907915994, Blast_Score=525, Evalue=1e-150,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): KUP1_NOVAD (Q2G8I5)
Other databases:
- EMBL: CP000248 - RefSeq: YP_496672.1 - STRING: Q2G8I5 - GeneID: 3917849 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1394 - NMPDR: fig|48935.1.peg.1250 - eggNOG: COG3158 - HOGENOM: HBG351154 - OMA: KECFSPE - PhylomeDB: Q2G8I5 - ProtClustDB: CLSK835383 - BioCyc: NARO279238:SARO_1394-MONOMER - HAMAP: MF_01522 - InterPro: IPR003855 - InterPro: IPR023051
Pfam domain/function: PF02705 K_trans
EC number: NA
Molecular weight: Translated: 70052; Mature: 69921
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14f01274)-; HASH(0x14f31008)-; HASH(0x1525319c)-; HASH(0x15900544)-; HASH(0x12a61088)-; HASH(0x14daa810)-; HASH(0x15923108)-; HASH(0x159b3f90)-; HASH(0x151be7fc)-; HASH(0x153e6648)-; HASH(0x1594c1ec)-; HASH(0x14f772b0)-;
Cys/Met content:
0.3 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAVTDADGSSAQSHAQSAGHHAVQGHGGHSQGPLLKLAVGAIGVVFGDIGTSPLYALR CCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH DTFAGHHKLPLDLLHIYGIISLMFWSMMIIVTFKYVSVIMRADNKGEGGSLALLALINQH HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCC TDGKRWGRGIILLGVFATALFYGDSMITPAVSVMGAIEGVAVYRPDMHPLIVPLVVGILI CCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH GLFFIQSRGTEKVAAFFGPIMLVYFGTIAVLGALSIAEYPPVIAALSPHHAVTMFIADPW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCH RGFLAMGAAVLAVTGAEALYADMGHFGRSPIRMSWLVFVLPALVLNYLGQASLLIRNPAA HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH LESPFYYLAPEWFQWPLLFIASCAAVIASQAVISGAFSVTQQAIQLGFIPRMTIKHTSTA HCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC AGQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTGAMLIDNFLLAVVLFKLWQWK CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTIPLDVFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIED CCCCHHHHHCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCEEEEEEEEECC VPYVDEGERYSVKDFGNGFYRLTLRFGFLEETDVPGALKGVSMCGEPFNMMKTSFFLSRQ CCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH TLIPSDKPGMALWREKLFAWMLRNAASAMEFFRLPTNRVVELGSQLKI HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH >Mature Secondary Structure SDAVTDADGSSAQSHAQSAGHHAVQGHGGHSQGPLLKLAVGAIGVVFGDIGTSPLYALR CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHH DTFAGHHKLPLDLLHIYGIISLMFWSMMIIVTFKYVSVIMRADNKGEGGSLALLALINQH HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHCC TDGKRWGRGIILLGVFATALFYGDSMITPAVSVMGAIEGVAVYRPDMHPLIVPLVVGILI CCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHH GLFFIQSRGTEKVAAFFGPIMLVYFGTIAVLGALSIAEYPPVIAALSPHHAVTMFIADPW HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCH RGFLAMGAAVLAVTGAEALYADMGHFGRSPIRMSWLVFVLPALVLNYLGQASLLIRNPAA HHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCHH LESPFYYLAPEWFQWPLLFIASCAAVIASQAVISGAFSVTQQAIQLGFIPRMTIKHTSTA HCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCC AGQIFIPVINWALMIAVILLVLVFQRSSNLTAAYGIAVTGAMLIDNFLLAVVLFKLWQWK CCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC APAAIAMLAVFFAIDAAYLGANMTKIPDGGWVPLVMGIAIFTLLTTWSRGRALMRENMAE CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GTIPLDVFTKSAHSSAARVSGTAIFMASTAAGVPSALLHNIKHNKVLHERVVILTVSIED CCCCHHHHHCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCEEEEEEEEECC VPYVDEGERYSVKDFGNGFYRLTLRFGFLEETDVPGALKGVSMCGEPFNMMKTSFFLSRQ CCCCCCCCEEEHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHH TLIPSDKPGMALWREKLFAWMLRNAASAMEFFRLPTNRVVELGSQLKI HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: K (I) [Periplasm] [C]
Specific reaction: K (I) [Periplasm] = K (I) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA