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The map label for this gene is ccmH [H]

Identifier: 87199413

GI number: 87199413

Start: 1435949

End: 1436389

Strand: Direct

Name: ccmH [H]

Synonym: Saro_1392

Alternate gene names: 87199413

Gene position: 1435949-1436389 (Clockwise)

Preceding gene: 87199412

Following gene: 87199414

Centisome position: 40.32

GC content: 67.35

Gene sequence:

>441_bases
ATGAGCGTTTCGCGTTCGCTAGGGCTTCTGGCCGCCGCCCTGCTGCTGAGCCTCACCGCTCCGCTTGCCGCGCAGGACAC
TATGCCGCCCGCGCCTTACGCCTACCGCCAGCTTGACGATCCGGCGCAGGAGGCCAAGGCCCAGGCCCTGATGGAAACGC
TGCGCTGCCTCAAGTGCCAGAGCCAGTCCATCGCCGATTCCGACGCGCCCATGGCCGGCGACATGCGTCACCAGGTTCGC
ACCCGCATCGCCGCCGGAGAACAGCCAGAAGCGATCCGCGCATGGCTGGTCGAACGTTATGGCGATTACGTGAGCTATGC
CCCCCAGAACAAGCCGATCATGTGGCCGCTCTTCGCCGCGCCGCTGGTGATCCTGTTGCTGGCCGCCGTGCTGCTGCGCG
GACGGTTCCGGCGCGGCGGCAAGCAGGAGAACGGCGAATGA

Upstream 100 bases:

>100_bases
TCGTTATCGATGGCAAGGGCGTGATCCGCTACCAGCACATCGGCGAAATCCGGCCCGAGGACATGGGTCTGATCCTCGGC
AAGCTGAAGGAGGCCGCGCA

Downstream 100 bases:

>100_bases
CCTGGGTGCTCGTCGTTCTGCTCGCCGGGGCCGTGTTCCTCGCGCTGGCCTTCGTCCTGAAGATGCCGCGCGCTGGGTGG
GAGCTTTCGGGCGCCGCGCT

Product: cytochrome C biogenesis protein

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CycL [H]

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSVSRSLGLLAAALLLSLTAPLAAQDTMPPAPYAYRQLDDPAQEAKAQALMETLRCLKCQSQSIADSDAPMAGDMRHQVR
TRIAAGEQPEAIRAWLVERYGDYVSYAPQNKPIMWPLFAAPLVILLLAAVLLRGRFRRGGKQENGE

Sequences:

>Translated_146_residues
MSVSRSLGLLAAALLLSLTAPLAAQDTMPPAPYAYRQLDDPAQEAKAQALMETLRCLKCQSQSIADSDAPMAGDMRHQVR
TRIAAGEQPEAIRAWLVERYGDYVSYAPQNKPIMWPLFAAPLVILLLAAVLLRGRFRRGGKQENGE
>Mature_145_residues
SVSRSLGLLAAALLLSLTAPLAAQDTMPPAPYAYRQLDDPAQEAKAQALMETLRCLKCQSQSIADSDAPMAGDMRHQVRT
RIAAGEQPEAIRAWLVERYGDYVSYAPQNKPIMWPLFAAPLVILLLAAVLLRGRFRRGGKQENGE

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG3088

COG function: function code O; Uncharacterized protein involved in biosynthesis of c-type cytochromes

Gene ontology:

Cell location: Membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmH/CycL/Ccl2/NrfF family [H]

Homologues:

Organism=Escherichia coli, GI1788522, Length=115, Percent_Identity=35.6521739130435, Blast_Score=73, Evalue=8e-15,
Organism=Escherichia coli, GI1790512, Length=72, Percent_Identity=43.0555555555556, Blast_Score=70, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005616 [H]

Pfam domain/function: PF03918 CcmH [H]

EC number: NA

Molecular weight: Translated: 15993; Mature: 15862

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSRSLGLLAAALLLSLTAPLAAQDTMPPAPYAYRQLDDPAQEAKAQALMETLRCLKCQ
CCCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHC
SQSIADSDAPMAGDMRHQVRTRIAAGEQPEAIRAWLVERYGDYVSYAPQNKPIMWPLFAA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
PLVILLLAAVLLRGRFRRGGKQENGE
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVSRSLGLLAAALLLSLTAPLAAQDTMPPAPYAYRQLDDPAQEAKAQALMETLRCLKCQ
CCCHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHC
SQSIADSDAPMAGDMRHQVRTRIAAGEQPEAIRAWLVERYGDYVSYAPQNKPIMWPLFAA
CCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
PLVILLLAAVLLRGRFRRGGKQENGE
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7715602; 11481430 [H]