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The map label for this gene is cycK [H]

Identifier: 87199411

GI number: 87199411

Start: 1433437

End: 1435404

Strand: Direct

Name: cycK [H]

Synonym: Saro_1390

Alternate gene names: 87199411

Gene position: 1433437-1435404 (Clockwise)

Preceding gene: 87199410

Following gene: 87199412

Centisome position: 40.25

GC content: 66.11

Gene sequence:

>1968_bases
ATGATCGCTGAACTCGGTCTTGCCGTCCTGTGGATGGCGGCGGCGCTTGCCGCCTTGCAGCTTTTCGCCGGCGTTTCGGC
CCTGCGCCCAGGCGGCGGGGCGGCGGGCAAGTCGCTCGCCGGCATGGTTCGCCCGCTAGCTGTCATGCAGGGTGCGCTCG
TCGCGATCTCGTTCCTGGCGCTGATCGACTTGTTCCTGGAAACGGACCTGTCGGTGAAGCTCGTGGCGGAAAACAGCCAC
TCGATGAAGCCGTTCATCTTCAAGCTGGCGGGTACGTGGGGCAACCACGAAGGCTCGATGCTGCTGTGGGTGACGATCAT
GGCGGTATCGGGCGGTTTCGTCGCGCTCATCGAGAAGCGCCTGCGCGAAGACACGCTGATCGCCACGCTGGCGGGGCAGG
CCTTCGTCAGCCTCGGCTTCTATGCCTTCCTGCTGTTCTCCTCGAACCCGTTCGAGCGACTGGCGGAACCAGCGCCTGAT
GGTGCCGGCCTCAACCCGCTGCTGCAGGACATCGGCCTCGCATTTCATCCGCCCACGCTCTACGTCGGTTATGTCGGGCT
TTCGGTGGCGTTCAGCTTTGCCATCGGCGCGCTGATCACGCGTGACGTCGGCCCCGCTTTCGCCCGCGCGATGCGCCCCT
GGGTGCTGGGCGCGTGGATTTTCCTCACCATCGGCATCACGGCCGGTTCCTACTGGGCCTACTACACGCTCGGCTGGGGT
GGCTGGTGGTTCTGGGACCCTGTCGAGAACGCCTCGCTCATGCCCTGGCTGGCCGCGACGGCATTGCTTCACTCGGCCTC
CGTCCTTGCCAGTCGCAACGCCTTGCGCGCGTGGACGGTGATGCTTGGCGTGATCGCCTTTTCGATGTCGATGGTCGGCA
CCTTCCTGGTGCGCTCGGGCATCCTGACGTCGGTCCATGCTTTCGCCGTCGATCCGGAACGCGGCTCGTTCATCCTTGCG
CTTCTGGCCATCTACATCGGCGGTGCATTGGCACTCTTCGGCCTGCGCGCGTCGACCGTGACCGAGGGTGAACGTTTCAG
CCTGTTCAGCCGTGAGGCGAGCCTCGTGTTCAACAACGTGATGCTCTGCGGCACGCTCGGCATCGTGCTGATCGGCACGC
TCTACCCACTGCTGACCGAAGCGTTCGGTGCCAAGGTTTCGGTGGGACCTCCCTATTTCAATCCGGTATCCGCGATCTTC
GTGATTCCGATGATGCTCGTCATGGGCGTCGGGCCGCTGCTTCGCTGGCGCAAGGACAAGCCAGGCCGCGTGACCGGCAG
TGTCGCGGTGCCTGCGCTGCTCACCGCGCTCGTCCTGCTCGCCGTCGTGGTCCTGGCCCCCGGCATTCGCATCCTGCCCG
CGCTCGGCCTTGCGGTTGGCGCCGGGTTGGCGCTGGCGAGCTGGTTCCCGCTCAGGGGCCGCAACCTGCGCCGCACGCCG
CTCAGCGTCTGGGGCATGGTCTTCGGCCACTTCGGCATTGCCGTCGCCTTGCTCGGCGCTGCCAGCGAAAGCGCATTCTC
GACCGAACGGCTGGCCGCGATGAATGTGGGCGATACGCAAAGCGTCGGTCCGATCTCGCTCAAGCTCGAGAAGATCGAAC
CTGTCGCCGGCCCCAACTGGACCGCGCTCGAGGCAACGGTCAGCGCATCGTACAAGGGCGGGGCGCCGGTCACGCTGCAT
CCGCAGGCGCGCACCTTCTCCTCGCCGCCTGGCGAGCGTACCGAATCCGCACTCCATACGCGCTGGAACGGCCAGCTCTA
TGCCGTGCTCGGCAACGAGGGCGAGGATGGCCGCTGGCAGATGCGCTTCTGGTGGAAGCCGTTCGTGCCGCTGCTCTGGC
TCGGCGGGCTGCTGATTGCGTTTGGCGGCGTTCTGGCGCTTCTGGGCCGGGTGGCGCATGATGTTCGCCGCCTGCGCGCA
GGCGGCAAGATTGCATATCGCCGGGCCCGGATGGAGCAGGTGAAGTGA

Upstream 100 bases:

>100_bases
TCGCCGACAATCTCCTCGCCAAGCATGACGAAAACTATGTCCCCCGCCAGATGGGCGACATGACGAAAGCCCAGGCCGAG
GCCGTGGTGGCGGAGACGAA

Downstream 100 bases:

>100_bases
CGGAACCCAAGGGCAAGCGCCCCGGCCTCGCGATCTGGCTTCCGCTCGCGCTGTTCGGTGCGTTCTTCGCGCTGGTGATC
TGGGGGCTCGTGCGCCCGGC

Product: cytochrome c assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 655; Mature: 655

Protein sequence:

>655_residues
MIAELGLAVLWMAAALAALQLFAGVSALRPGGGAAGKSLAGMVRPLAVMQGALVAISFLALIDLFLETDLSVKLVAENSH
SMKPFIFKLAGTWGNHEGSMLLWVTIMAVSGGFVALIEKRLREDTLIATLAGQAFVSLGFYAFLLFSSNPFERLAEPAPD
GAGLNPLLQDIGLAFHPPTLYVGYVGLSVAFSFAIGALITRDVGPAFARAMRPWVLGAWIFLTIGITAGSYWAYYTLGWG
GWWFWDPVENASLMPWLAATALLHSASVLASRNALRAWTVMLGVIAFSMSMVGTFLVRSGILTSVHAFAVDPERGSFILA
LLAIYIGGALALFGLRASTVTEGERFSLFSREASLVFNNVMLCGTLGIVLIGTLYPLLTEAFGAKVSVGPPYFNPVSAIF
VIPMMLVMGVGPLLRWRKDKPGRVTGSVAVPALLTALVLLAVVVLAPGIRILPALGLAVGAGLALASWFPLRGRNLRRTP
LSVWGMVFGHFGIAVALLGAASESAFSTERLAAMNVGDTQSVGPISLKLEKIEPVAGPNWTALEATVSASYKGGAPVTLH
PQARTFSSPPGERTESALHTRWNGQLYAVLGNEGEDGRWQMRFWWKPFVPLLWLGGLLIAFGGVLALLGRVAHDVRRLRA
GGKIAYRRARMEQVK

Sequences:

>Translated_655_residues
MIAELGLAVLWMAAALAALQLFAGVSALRPGGGAAGKSLAGMVRPLAVMQGALVAISFLALIDLFLETDLSVKLVAENSH
SMKPFIFKLAGTWGNHEGSMLLWVTIMAVSGGFVALIEKRLREDTLIATLAGQAFVSLGFYAFLLFSSNPFERLAEPAPD
GAGLNPLLQDIGLAFHPPTLYVGYVGLSVAFSFAIGALITRDVGPAFARAMRPWVLGAWIFLTIGITAGSYWAYYTLGWG
GWWFWDPVENASLMPWLAATALLHSASVLASRNALRAWTVMLGVIAFSMSMVGTFLVRSGILTSVHAFAVDPERGSFILA
LLAIYIGGALALFGLRASTVTEGERFSLFSREASLVFNNVMLCGTLGIVLIGTLYPLLTEAFGAKVSVGPPYFNPVSAIF
VIPMMLVMGVGPLLRWRKDKPGRVTGSVAVPALLTALVLLAVVVLAPGIRILPALGLAVGAGLALASWFPLRGRNLRRTP
LSVWGMVFGHFGIAVALLGAASESAFSTERLAAMNVGDTQSVGPISLKLEKIEPVAGPNWTALEATVSASYKGGAPVTLH
PQARTFSSPPGERTESALHTRWNGQLYAVLGNEGEDGRWQMRFWWKPFVPLLWLGGLLIAFGGVLALLGRVAHDVRRLRA
GGKIAYRRARMEQVK
>Mature_655_residues
MIAELGLAVLWMAAALAALQLFAGVSALRPGGGAAGKSLAGMVRPLAVMQGALVAISFLALIDLFLETDLSVKLVAENSH
SMKPFIFKLAGTWGNHEGSMLLWVTIMAVSGGFVALIEKRLREDTLIATLAGQAFVSLGFYAFLLFSSNPFERLAEPAPD
GAGLNPLLQDIGLAFHPPTLYVGYVGLSVAFSFAIGALITRDVGPAFARAMRPWVLGAWIFLTIGITAGSYWAYYTLGWG
GWWFWDPVENASLMPWLAATALLHSASVLASRNALRAWTVMLGVIAFSMSMVGTFLVRSGILTSVHAFAVDPERGSFILA
LLAIYIGGALALFGLRASTVTEGERFSLFSREASLVFNNVMLCGTLGIVLIGTLYPLLTEAFGAKVSVGPPYFNPVSAIF
VIPMMLVMGVGPLLRWRKDKPGRVTGSVAVPALLTALVLLAVVVLAPGIRILPALGLAVGAGLALASWFPLRGRNLRRTP
LSVWGMVFGHFGIAVALLGAASESAFSTERLAAMNVGDTQSVGPISLKLEKIEPVAGPNWTALEATVSASYKGGAPVTLH
PQARTFSSPPGERTESALHTRWNGQLYAVLGNEGEDGRWQMRFWWKPFVPLLWLGGLLIAFGGVLALLGRVAHDVRRLRA
GGKIAYRRARMEQVK

Specific function: Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase [H]

COG id: COG1138

COG function: function code O; Cytochrome c biogenesis factor

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ccmF/cycK/ccl1/nrfE/ccsA family [H]

Homologues:

Organism=Escherichia coli, GI1788524, Length=581, Percent_Identity=44.578313253012, Blast_Score=462, Evalue=1e-131,
Organism=Escherichia coli, GI1790511, Length=572, Percent_Identity=34.0909090909091, Blast_Score=260, Evalue=2e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003567
- InterPro:   IPR003568 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 69886; Mature: 69886

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAELGLAVLWMAAALAALQLFAGVSALRPGGGAAGKSLAGMVRPLAVMQGALVAISFLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIDLFLETDLSVKLVAENSHSMKPFIFKLAGTWGNHEGSMLLWVTIMAVSGGFVALIEKR
HHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHCCCHHHHHHHH
LREDTLIATLAGQAFVSLGFYAFLLFSSNPFERLAEPAPDGAGLNPLLQDIGLAFHPPTL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCCEECCCHH
YVGYVGLSVAFSFAIGALITRDVGPAFARAMRPWVLGAWIFLTIGITAGSYWAYYTLGWG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
GWWFWDPVENASLMPWLAATALLHSASVLASRNALRAWTVMLGVIAFSMSMVGTFLVRSG
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTSVHAFAVDPERGSFILALLAIYIGGALALFGLRASTVTEGERFSLFSREASLVFNNV
HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MLCGTLGIVLIGTLYPLLTEAFGAKVSVGPPYFNPVSAIFVIPMMLVMGVGPLLRWRKDK
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC
PGRVTGSVAVPALLTALVLLAVVVLAPGIRILPALGLAVGAGLALASWFPLRGRNLRRTP
CCCEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LSVWGMVFGHFGIAVALLGAASESAFSTERLAAMNVGDTQSVGPISLKLEKIEPVAGPNW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCCCC
TALEATVSASYKGGAPVTLHPQARTFSSPPGERTESALHTRWNGQLYAVLGNEGEDGRWQ
EEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE
MRFWWKPFVPLLWLGGLLIAFGGVLALLGRVAHDVRRLRAGGKIAYRRARMEQVK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MIAELGLAVLWMAAALAALQLFAGVSALRPGGGAAGKSLAGMVRPLAVMQGALVAISFLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIDLFLETDLSVKLVAENSHSMKPFIFKLAGTWGNHEGSMLLWVTIMAVSGGFVALIEKR
HHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCEEEHHHHHHHCCCHHHHHHHH
LREDTLIATLAGQAFVSLGFYAFLLFSSNPFERLAEPAPDGAGLNPLLQDIGLAFHPPTL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHCCCEECCCHH
YVGYVGLSVAFSFAIGALITRDVGPAFARAMRPWVLGAWIFLTIGITAGSYWAYYTLGWG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC
GWWFWDPVENASLMPWLAATALLHSASVLASRNALRAWTVMLGVIAFSMSMVGTFLVRSG
CEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTSVHAFAVDPERGSFILALLAIYIGGALALFGLRASTVTEGERFSLFSREASLVFNNV
HHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
MLCGTLGIVLIGTLYPLLTEAFGAKVSVGPPYFNPVSAIFVIPMMLVMGVGPLLRWRKDK
HHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHHHHCCCHHHHCCCCC
PGRVTGSVAVPALLTALVLLAVVVLAPGIRILPALGLAVGAGLALASWFPLRGRNLRRTP
CCCEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCH
LSVWGMVFGHFGIAVALLGAASESAFSTERLAAMNVGDTQSVGPISLKLEKIEPVAGPNW
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHEECCCCCCCCCCEEEEEEEECCCCCCCC
TALEATVSASYKGGAPVTLHPQARTFSSPPGERTESALHTRWNGQLYAVLGNEGEDGRWQ
EEEEEEEECCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE
MRFWWKPFVPLLWLGGLLIAFGGVLALLGRVAHDVRRLRAGGKIAYRRARMEQVK
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7715601; 12597275 [H]