Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199389

Identifier: 87199389

GI number: 87199389

Start: 1415852

End: 1416130

Strand: Reverse

Name: 87199389

Synonym: Saro_1368

Alternate gene names: NA

Gene position: 1416130-1415852 (Counterclockwise)

Preceding gene: 87199403

Following gene: 87199385

Centisome position: 39.76

GC content: 70.25

Gene sequence:

>279_bases
ATGCTCGCTCTGCTCTGCACTCTGGTCTTCGCCGCAGCTGCCACTTTCGCATTGGCCGCAGGCTTCCTCACGATGCAGGG
CCGCAAGGCGCAGATCGTGGCACTGCTGGCAGAACGGCGCTCGCTCCGGATGGACCGCGAGTTTCTCGTGCGGATCACCA
GCCACGAAGCCGAAGCGCCCCGCGCATTCGCCGCGCCCCAGCTTCGCCGGATCGCGCGCCGGGCGGTCAAGCGGTCGGAA
GCTGCCCGGCTCGGGCGTGGGCAGCGCGCTGCCGCCTGA

Upstream 100 bases:

>100_bases
CTCCAGTCAGGAACAATACAGCAATCCACAGGTTTTCCACAGGCCAATCGGAACCGTAGGGGGACCGGGCCGGAGGAACG
AAAGCTCAAGGAAACGCCAA

Downstream 100 bases:

>100_bases
CCTTTGCGTAACGATACACGCCCATCGGGATGAGCAGCAGGTAAACCACGCAGATCCCCACCAGCGTCAGCCAGGGTTCG
GTCAGCAACGCCGCAATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MLALLCTLVFAAAATFALAAGFLTMQGRKAQIVALLAERRSLRMDREFLVRITSHEAEAPRAFAAPQLRRIARRAVKRSE
AARLGRGQRAAA

Sequences:

>Translated_92_residues
MLALLCTLVFAAAATFALAAGFLTMQGRKAQIVALLAERRSLRMDREFLVRITSHEAEAPRAFAAPQLRRIARRAVKRSE
AARLGRGQRAAA
>Mature_92_residues
MLALLCTLVFAAAATFALAAGFLTMQGRKAQIVALLAERRSLRMDREFLVRITSHEAEAPRAFAAPQLRRIARRAVKRSE
AARLGRGQRAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10077; Mature: 10077

Theoretical pI: Translated: 12.45; Mature: 12.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALLCTLVFAAAATFALAAGFLTMQGRKAQIVALLAERRSLRMDREFLVRITSHEAEAP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
RAFAAPQLRRIARRAVKRSEAARLGRGQRAAA
CHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLALLCTLVFAAAATFALAAGFLTMQGRKAQIVALLAERRSLRMDREFLVRITSHEAEAP
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
RAFAAPQLRRIARRAVKRSEAARLGRGQRAAA
CHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA