| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199344
Identifier: 87199344
GI number: 87199344
Start: 1367634
End: 1368020
Strand: Reverse
Name: 87199344
Synonym: Saro_1323
Alternate gene names: NA
Gene position: 1368020-1367634 (Counterclockwise)
Preceding gene: 87199345
Following gene: 87199343
Centisome position: 38.41
GC content: 48.58
Gene sequence:
>387_bases ATGACGAAAAATGTGGGACCGCGGGCCGGACCATCAGTTTGTACCGCAACTATTTATCCGGTCAAAGGAACTCCAGCACT TCTAACGACCGAAGATGCAGAAATTATTCGCGAAAGTTTGAAGTTGGATTGGCAACCGTTAGGCGAAATCCTGCTCCGGA CAGACGGCTTTAAATTTCATACATCAGGCTTAAGCATAGAAAATCCGGAAGGTGACGGATTCTTGATGGCCAAGGTTTCG GACCCTAAGTTCAAAGACGAAGAGAACGTTTACACTGAAGCAGCACAACGGCGTTCTGCAATCACGGTCCTGGCCAGAAA GGGCTACAGAGGCGGGAAACTTGCAGCAGTCGAGATCGTGGAGTTCTTAAATGAGGTCCCTTCATGA
Upstream 100 bases:
>100_bases CGCCCTCCCCTTTACCCGTCACCCTGAACTTGTTTCAGGGTCCATCCCTCCCGACAAGCGGAAGTCTGATCCGCAAAATG GATCCTGAAACAAGTTCAGG
Downstream 100 bases:
>100_bases GCTAAGCAGAGCTACAATCTAGGCCTATTTGCGCAGGATCACGATGCGGGCGATCAGTGGTGCACAATCGCCTCATACCC CATTCTCCTTGCTTTTCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTKNVGPRAGPSVCTATIYPVKGTPALLTTEDAEIIRESLKLDWQPLGEILLRTDGFKFHTSGLSIENPEGDGFLMAKVS DPKFKDEENVYTEAAQRRSAITVLARKGYRGGKLAAVEIVEFLNEVPS
Sequences:
>Translated_128_residues MTKNVGPRAGPSVCTATIYPVKGTPALLTTEDAEIIRESLKLDWQPLGEILLRTDGFKFHTSGLSIENPEGDGFLMAKVS DPKFKDEENVYTEAAQRRSAITVLARKGYRGGKLAAVEIVEFLNEVPS >Mature_127_residues TKNVGPRAGPSVCTATIYPVKGTPALLTTEDAEIIRESLKLDWQPLGEILLRTDGFKFHTSGLSIENPEGDGFLMAKVSD PKFKDEENVYTEAAQRRSAITVLARKGYRGGKLAAVEIVEFLNEVPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13981; Mature: 13850
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKNVGPRAGPSVCTATIYPVKGTPALLTTEDAEIIRESLKLDWQPLGEILLRTDGFKFH CCCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEE TSGLSIENPEGDGFLMAKVSDPKFKDEENVYTEAAQRRSAITVLARKGYRGGKLAAVEIV ECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHH EFLNEVPS HHHHHCCC >Mature Secondary Structure TKNVGPRAGPSVCTATIYPVKGTPALLTTEDAEIIRESLKLDWQPLGEILLRTDGFKFH CCCCCCCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHCCCCCCHHHHHHHCCCCEEE TSGLSIENPEGDGFLMAKVSDPKFKDEENVYTEAAQRRSAITVLARKGYRGGKLAAVEIV ECCCCEECCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHH EFLNEVPS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA