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The map label for this gene is atpF [H]

Identifier: 87199339

GI number: 87199339

Start: 1362491

End: 1362985

Strand: Direct

Name: atpF [H]

Synonym: Saro_1318

Alternate gene names: 87199339

Gene position: 1362491-1362985 (Clockwise)

Preceding gene: 87199338

Following gene: 87199340

Centisome position: 38.26

GC content: 67.88

Gene sequence:

>495_bases
ATGCCTCAGATTGAACAGCTTGCCACCACCTACTCCAGCCAGGTCTTCTGGCTGCTGGTGTTCTTCGGCATTGTCTTCTT
CGTGATCGGCCGGGGCATGCTGCCCAAGGTCGTTTCCACGATGGACGGCCGCGACAAGCAGATCGCCGACGACCTTGCCG
CTGCTGAAGCCGCACGGGCCGCCGCCGATGCCGAGGAAGAGGCATGGCGCGTCCAGGCGAACCAGCAGCGCGCCGCTGCC
CAGGCCGTGATCGCAGCCGCCAAGGCGGATGCGGCCAAGGCAACCGACGCCACGCTCGCCGCTGCCTCGGCTCGTATCGA
CGAGACCGTGACCGCCGCCGAAGCCCGCATTGCCGCTGCCCGCGCTTCCGCGCTGGGTGAAGTGGAAGGCGTTGCCGCCG
AAGCCGCGCAGGACATCGCAAGCCGCCTTGCCGGCCTGTCGATCCCTGCCGACGAGGCGCAGGCCGCCGTGAAGGGAGTT
CTCGCTCATGGCTAA

Upstream 100 bases:

>100_bases
CGATGATCCTGATCTTCGTCGCCTAAGGCGAACGAAGCTCACTGATTGTTGAAATGCTGGCCGGGGTCCGCCCCGGCCGC
CTGACGCCCGGACACCCGCG

Downstream 100 bases:

>100_bases
TGCCGAAGCGACCACTGCCGTCGTCGAGCACGAGGCTGCTGGCGGCGAACACCACGTAGAGCCCTCGGCTCTGGGCCTCG
GGCCCGGTGCCTGGGTCGCG

Product: H+-transporting two-sector ATPase subunit B/B'

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MPQIEQLATTYSSQVFWLLVFFGIVFFVIGRGMLPKVVSTMDGRDKQIADDLAAAEAARAAADAEEEAWRVQANQQRAAA
QAVIAAAKADAAKATDATLAAASARIDETVTAAEARIAAARASALGEVEGVAAEAAQDIASRLAGLSIPADEAQAAVKGV
LAHG

Sequences:

>Translated_164_residues
MPQIEQLATTYSSQVFWLLVFFGIVFFVIGRGMLPKVVSTMDGRDKQIADDLAAAEAARAAADAEEEAWRVQANQQRAAA
QAVIAAAKADAAKATDATLAAASARIDETVTAAEARIAAARASALGEVEGVAAEAAQDIASRLAGLSIPADEAQAAVKGV
LAHG
>Mature_163_residues
PQIEQLATTYSSQVFWLLVFFGIVFFVIGRGMLPKVVSTMDGRDKQIADDLAAAEAARAAADAEEEAWRVQANQQRAAAQ
AVIAAAKADAAKATDATLAAASARIDETVTAAEARIAAARASALGEVEGVAAEAAQDIASRLAGLSIPADEAQAAVKGVL
AHG

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 16806; Mature: 16675

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIEQLATTYSSQVFWLLVFFGIVFFVIGRGMLPKVVSTMDGRDKQIADDLAAAEAARA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AADAEEEAWRVQANQQRAAAQAVIAAAKADAAKATDATLAAASARIDETVTAAEARIAAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASALGEVEGVAAEAAQDIASRLAGLSIPADEAQAAVKGVLAHG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PQIEQLATTYSSQVFWLLVFFGIVFFVIGRGMLPKVVSTMDGRDKQIADDLAAAEAARA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH
AADAEEEAWRVQANQQRAAAQAVIAAAKADAAKATDATLAAASARIDETVTAAEARIAAA
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASALGEVEGVAAEAAQDIASRLAGLSIPADEAQAAVKGVLAHG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA