Click here to switch to the map view.

The map label for this gene is ydbL [C]

Identifier: 87199335

GI number: 87199335

Start: 1360382

End: 1360789

Strand: Direct

Name: ydbL [C]

Synonym: Saro_1314

Alternate gene names: 87199335

Gene position: 1360382-1360789 (Clockwise)

Preceding gene: 87199334

Following gene: 87199336

Centisome position: 38.2

GC content: 68.63

Gene sequence:

>408_bases
ATGGTCAGGATGAAGACGGTTTCCATGCGCAGGACACTTGCAGCGGTTGCGGCAGCCGGCCTGGTCGCGGGGGCGCTTTC
GGCGCCGGCCTTCGCGCAGTCGCGCGATCCGGCCTATGCGGCCGCACGCGCCGGCGGGCAGGTGGGCGAGAAGATGGACG
GCTATCTGGGCTATGTCGTCCCGCCCAGCCCGACGCTGCGCGCGGTGGTCGAGGACATCAACATCAAGCGCAAGGCGGTC
TATGCCGAAAAGGCGCAGGCCAACAAGGCGACGGTCGAGGAATACGCGCTCACCTCCGGTTGCCTGCTCATCGCGCAGAC
CAAGCCGGGCGAAAAGTACCAGGCGCCGGACGGGTCCTGGCAGACGCGCGGCAACGGTCCTCCGCTGCGCGATTCGCGGT
GCCCGTGA

Upstream 100 bases:

>100_bases
TCAACATCAAGCAGGAGGTCGTGTACCGGCTCGCGGCAGACGCGGGCAACACGATCGAAAACAACCCGGACATCTTCTGA
TGCGCCGGGAAAGTTCGAGG

Downstream 100 bases:

>100_bases
CAGAATCAGCGCATACGAAACACCAACGCATTTCCGCCCTTCCTCGCTACCGCGGGGGAGGGCGTTCGCTTTTGCGGAGA
ATGCTGGATCATGACCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVRMKTVSMRRTLAAVAAAGLVAGALSAPAFAQSRDPAYAAARAGGQVGEKMDGYLGYVVPPSPTLRAVVEDINIKRKAV
YAEKAQANKATVEEYALTSGCLLIAQTKPGEKYQAPDGSWQTRGNGPPLRDSRCP

Sequences:

>Translated_135_residues
MVRMKTVSMRRTLAAVAAAGLVAGALSAPAFAQSRDPAYAAARAGGQVGEKMDGYLGYVVPPSPTLRAVVEDINIKRKAV
YAEKAQANKATVEEYALTSGCLLIAQTKPGEKYQAPDGSWQTRGNGPPLRDSRCP
>Mature_135_residues
MVRMKTVSMRRTLAAVAAAGLVAGALSAPAFAQSRDPAYAAARAGGQVGEKMDGYLGYVVPPSPTLRAVVEDINIKRKAV
YAEKAQANKATVEEYALTSGCLLIAQTKPGEKYQAPDGSWQTRGNGPPLRDSRCP

Specific function: Unknown

COG id: COG3784

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081895, Length=112, Percent_Identity=35.7142857142857, Blast_Score=61, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14237; Mature: 14237

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRMKTVSMRRTLAAVAAAGLVAGALSAPAFAQSRDPAYAAARAGGQVGEKMDGYLGYVV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEE
PPSPTLRAVVEDINIKRKAVYAEKAQANKATVEEYALTSGCLLIAQTKPGEKYQAPDGSW
CCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
QTRGNGPPLRDSRCP
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MVRMKTVSMRRTLAAVAAAGLVAGALSAPAFAQSRDPAYAAARAGGQVGEKMDGYLGYVV
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEE
PPSPTLRAVVEDINIKRKAVYAEKAQANKATVEEYALTSGCLLIAQTKPGEKYQAPDGSW
CCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCC
QTRGNGPPLRDSRCP
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA